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121.
Fakhrossadat Mohammadi Marzieh Moeeni 《Journal of biomolecular structure & dynamics》2017,35(16):3486-3498
It was reported that bovine α-lactalbumin (BLA) as an important whey protein can be utilized as valuable vehicle for metal ions. The goal of this study was to investigate the interaction of BLA with bisdemethoxycurcumin (BDMC), Diacetylcurcumin (DAC), and diacetylbisdemethoxycurcumin (DABC) as three bioactive compounds by fluorescence quenching measurements and docking studies. It was observed that these ligands come closer to tryptophan residues and quench their emission without any change in their micro region polarity. The Stern–Volmer equation which is the best model to provide information about the interaction between small bioactive molecules and proteins was used to obtain the binding constants and the binding stoichiometry. Information about the extent of resonance energy transfer and Förster’s distance between donor and acceptor was estimated. Thermodynamic parameters confirmed that the final BDMC–BLA complex was stabilized by hydrogen bonds, whereas the final DABC–BLA and DAC–BLA complexes were stabilized by hydrophobic bonds which are in accordance with their chemical structures. Both the synchronous and docking studies verified that theTrp-26 which is the most exposed Tryptophan residue has the most contribution in the binding process. The Förster’s distances between bound ligands and tryptophans were in agreement with the measured distances by docking studies. The obtained achievements confirmed that there are considerable binding interactions between these curcuminoids and BLA. 相似文献
122.
Bioprocess and Biosystems Engineering - In this article, availability and control of water in solid-state fermentation (SSF) were investigated. Based on passive transport of water through plasma... 相似文献
123.
Somayeh NAGHILOO Masoumeh KHODAVERDI Zahra ESMAILLOU Mohammad Reza DADPOUR Paula J. RUDALL 《植物分类学报:英文版》2014,52(2):195-214
A comparative developmental study of flowers was carried out using epi-illumination light microscopy on four genera of Lamiaceae (Nepeta, Rosmarinus, Salvia, andZiziphora), representing all three subtribes of Mentheae. All species examined share unidirectional (adaxial to abaxial) sepal initiation, except Rosmarinus, which has the reverse unidirectional sequence, starting abaxially. Initiated but suppressed bracteoles were detected only in Rosmarinus. In Rosmarinus, Salvia, and Ziziphora, initiation of petals and stamens proceeds unidirectionally from the abaxial side. Floral initiation of Nepeta has bidirectional inception of petals and unidirectional stamen initiation from the adaxial side. Temporal overlap in organ initiation between petal and stamen whorls occurs in all taxa, though this feature is more prominent in Rosmarinus. Significant structural and developmental features that distinguish the four genera include: (1) polysymmetric calyx tube, highly tomentose corolla and deeply four-partitioned ovary in Nepeta; (2) monosymmetric two-lipped calyx and shallowly four-partitioned ovary in Ziziphora; and (3) suppression of adaxial stamens in Salvia and Rosmarinus. Adaxial stamens are absent from Rosmarinus, but reduced stamens remain as staminodia in Salvia. In a phylogenetic context, the late monosymmetry of Nepeta and very early monosymmetry of Rosmarinus could both be regarded as derived conditions compared with the early monosymmetry ofSalvia and Ziziphora. 相似文献
124.
125.
The problem of deterioration of art works is particularly relevant in countries like Iran that are rich in cultural heritage.
According to UNESCO data, Iran holds the tenth rank in a list of countries possessing the highest number of monuments belonging
to the world cultural heritage. Archaeological areas, buildings, mosques, statues, museums and objects are all exposed to
different biogenic and abiogenic stresses under generally aggressive climatic conditions. Lichens and fungi are known to actively
decompose stone surfaces. This process is both physical and chemical in nature and often reaches deep below the stone surfaces.
This is caused by chemical and physical interactions of the microbiota with the fluctuating and often drastically changing
environmental conditions. Here, we describe and analyze the mainly physical degradation by invading fungal hyphae between
stone crystals and a generally destabilizing stone texture. In addition to physical deterioration, organic acids produced
by lichens enhance the chemical decomposing processes. In this work, penetration of hyphal bundles as well as individual fungi
was studied, and the biodeteriorating patterns were documented and compared to general physical–chemical weathering phenomena.
Several strains of aggressive black yeast-like fungi and bacteria were isolated and cultivated and will be described in a
taxonomical context with many other isolates from different localities using physiological, morphological and molecular data. 相似文献
126.
Abdol-Khalegh Bordbar Fakhrossadat Mohammadi Chris Orvig 《Journal of inorganic biochemistry》2009,103(4):643-647
Bis(maltolato)oxovanadium(IV) (BMOV), and its ethylmaltol analog, bis(ethylmaltolato)oxovanadium(IV) (BEOV), are candidate insulin-enhancing agents for the treatment of type 2 diabetes mellitus; in mid-2008, BEOV advanced to phase II clinical testing. The interactions of BMOV and its inorganic congener, vanadyl sulfate (VOSO4), with human serum apo-transferrin (hTf) were investigated using differential scanning calorimetry (DSC). Addition of BMOV or VOSO4 to apo-hTf resulted in an increase in thermal stability of both the C- and N-lobes of transferrin as a result of binding to either vanadyl compound. A series of DSC thermograms of hTf solutions containing different molar ratios of BMOV and VOSO4 were used to determine binding constants; at 25 °C the binding constants of BMOV to the C- and N-lobes of apo-hTf were found to be 3 (±1) × 105 and 1.8 (±0.7) × 105 M−1, respectively. The corresponding values for VOSO4 were 1.7 (±0.3) × 105 and 7 (±2) × 104 M−1. The results show that the vanadium species initially presented as either BMOV or VOSO4 had similar affinities for human serum transferrin due to oxidation of solvated vanadyl(IV) prior to complexation to transferrin. Binding of metavanadate () was confirmed by DSC and isothermal titration calorimetry (ITC) experiments of the interaction between sodium metavanadate (NaVO3) and hTf. 相似文献
127.
Radovan Murín Ghasem Mohammadi Dieter Leibfritz Bernd Hamprecht 《Neurochemical research》2009,34(7):1195-1203
The three essential amino acids, valine, leucine and isoleucine, constitute the group of branched-chain amino acids (BCAAs).
BCAAs are rapidly taken up into the brain parenchyma, where they serve several distinct functions including that as fuel material
in brain energy metabolism. As one function of astrocytes is considered the production of fuel molecules that support the
energy metabolism of adjacent neural cells in brain. Astroglia-rich primary cultures (APC) were shown to rapidly dispose of
the BCAAs, including valine, contained in the culture medium. While the metabolisms of leucine and isoleucine by APC have
already been studied in detail, some aspects of valine metabolism remained to be determined. Therefore, in the present study
an NMR analysis was performed to identify the 13C-labelled metabolites that are generated by APC during catabolism of [U-13C]valine and that are subsequently released into the incubation medium. The results presented show that APC (1) are potently
disposing of the valine contained in the incubation medium; (2) are capable of degrading valine to the tricarboxylic acid
(TCA) cycle member succinyl-CoA; and (3) release into the extracellular milieu valine catabolites and compounds generated
from them such as [U-13C]2-oxoisovalerate, [U-13C]3-hydroxyisobutyrate, [U-13C]2-methylmalonate, [U-13C]isobutyrate, and [U-13C]propionate as well as several TCA cycle-dependent metabolites including lactate.
This article is dedicated to Dr. George DeVries. 相似文献
128.
Hamid Mohammadi Sandra Alaniz Zia Banihashemi Josep Armengol 《Journal of Phytopathology》2009,157(10):642-645
Eight Cylindrocarpon isolates recovered from the trunk bases of 10-year-old grapevines showing decline symptoms from two vineyards in Bavanat (Fars province, south-western Iran) were studied. Based on phenotypical characteristics, mating experiments and molecular data, they were identified as Cylindrocarpon liriodendri. Pathogenicity was confirmed with selected isolates inoculated into 8-month-old dormant rooted cuttings of grapevine rootstock cv. 110 Richter. This is the first report of C. liriodendri causing black foot disease of grapevines in Iran. 相似文献
129.
Zahra Razaghi Moghadam Kashani Hayedeh Ahrabian Elahe Elahi Abbas Nowzari-Dalini Elnaz Saberi Ansari Sahar Asadi Shahin Mohammadi Falk Schreiber Ali Masoudi-Nejad 《BMC bioinformatics》2009,10(1):318
Background
Complex networks are studied across many fields of science and are particularly important to understand biological processes. Motifs in networks are small connected sub-graphs that occur significantly in higher frequencies than in random networks. They have recently gathered much attention as a useful concept to uncover structural design principles of complex networks. Existing algorithms for finding network motifs are extremely costly in CPU time and memory consumption and have practically restrictions on the size of motifs. 相似文献130.
Mohammadi MR Vadamalai G Joseph H 《Communications in agricultural and applied biological sciences》2010,75(4):777-781
Coconut cadong-cadong viroid (CCCVd) causes the Lethal cadang-cadang disease of coconut palms in the Philippines and it is recently reported to be associated with the orange spotting disease on oil palm in Malaysia. The low concentration of the viroid RNA in oil palm as well as the high content of polyphenols and polysaccharides in this plant which interfere with the purification steps makes it difficult to extract and detect this viroid from oil palm. A previously described method was modified and optimized for extraction and detection of CCCVd from infected oil palms. Briefly, 7 g of leaf material was homogenized in a mortar or a blender using liquid nitrogen. 10 ml of extraction buffer (100 mM Tris-HCl pH 7.5, 100 mM NaCl, 10 mM EDTA) along with 100 mM 2-mercaptoethanol and 10 ml water saturated phenol was added to the frozen powder. After centrifuging at 4 degrees C, 4000 g for 30 min, the aqueous phase was extracted once more with phenol then once with chloroform-isoamyl alcohol (24:1). After adding sodium acetate, pH 5.6 to 200 mM, the mixture was precipitated with 2.5 vol ethanol overnight in -20 freezer and then the pellet was washed with 70% ethanol and air-dried. One milliliter of 8 M LiCl was added to the dried pellet and after shaking overnight at 4 degrees C and another centrifugation step the supernatant was collected and precipitated again with ethanol and then the resulting pellet was washed and air-dried. To carry out northern blotting, samples equivalent to 40 g of plant tissue were mixed with formamide buffer and loaded onto a 12% polyacrylamide gel containing 7 M urea and after separation by electrophoresis, were electroblotted onto membrane and fixed by UV cross-linking. Pre-hybridization and hybridization using hybridization buffer (50% formamide, 25%SSPE, 0.1% Ficol and PVP, 0.1 % SDS, 0.02 % DNA (5mg/ml)) was carried out at 45 degrees C for 90 min and 16 h, respectively followed by two low stringency washes (0.5 X SSC, 0.1% SDS, at room temperature for 5 min) and one high stringency wash (0.1X SSC, 0.1% SDS at 60 degrees C for 1 hour). In vitro synthesized DIG-labeled full-length CCCVd(-) RNA probe was used in hybridization step. DIG Nucleic Acid Detection Kit (Roche) instructions were followed for detection procedure and as a result the blue bands corresponding to the position of the viroid were appeared on the membrane. The result of this study showed the ability of DIG labeled probe in detection of the viroid and also provided a suitable extraction and hybridization method for the detection of CCCVd from oil palm. 相似文献