Afforestation does not necessarily reduce nitrous oxide emissions from managed boreal peat soils

Pristine peatlands have generally low nitrous oxide (N₂O) emissions but drainage and management practices enhance the microbial processes and associated N₂O emissions. It is assumed that leaving peat soils from intensive management, such as agriculture, will decrease their N₂O emissions. In this paper we report how the annual N₂O emission rates will change when agricultural peat soil is either left abandoned or afforested and also N₂O emissions from afforested peat extraction sites. In addition, we evaluated a biogeochemical model (DNDC) with a view to explaining GHG emissions from peat soils under different land uses. The abandoned agricultural peat soils had lower mean annual N₂O emissions (5.5?±?5.4?kg?N?ha^?1) than the peat soils in active agricultural use in Finland. Surprisingly, N₂O emissions from afforested organic agricultural soils (12.8?±?9.4?kg?N?ha^?1) were similar to those from organic agricultural soils in active use. These emissions were much higher than those from the forests on nutrient rich peat soils. Abandoned and afforested peat extraction sites emitted more N₂O, (2.4?±?2.1?kg?N?ha^?1), than the areas under active peat extraction (0.7?±?0.5?kg?N?ha^?1). Emissions outside the growing season contributed significantly, 40% on an average, to the annual emissions. The DNDC model overestimated N₂O emission rates during the growing season and indicated no emissions during winter. The differences in the N₂O emission rates were not associated with the age of the land use change, vegetation characteristics, peat depth or peat bulk density. The highest N₂O emissions occurred when the soil C:N ratio was below 20 with a significant variability within the measured C:N range (13–27). Low soil pH, high nitrate availability and water table depth (50–70?cm) were also associated with high N₂O emissions. Mineral soil has been added to most of the soils studied here to improve the fertility and this may have an impact on the N₂O emissions. We infer from the multi-site dataset presented in this paper that afforestation is not necessarily an efficient way to reduce N₂O emissions from drained boreal organic fields.     

Increased production of xylanase by expression of a truncated version of the xyn11A gene from Nonomuraea flexuosa in Trichoderma reesei

We have previously shown that the Nonomuraea flexuosa Xyn11A polypeptides devoid of the carbohydrate binding module (CBM) have better thermostability than the full-length xylanase and are effective in bleaching of pulp. To produce an enzyme preparation useful for industrial applications requiring high temperature, the region encoding the CBM was deleted from the N. flexuosa xyn11A gene and the truncated gene was expressed in Trichoderma reesei. The xylanase sequence was fused to the T. reesei mannanase I (Man5A) signal sequence or 3' to a T. reesei carrier polypeptide, either the Man5A core/hinge or the cellulose binding domain (CBD) of cellobiohydrolase II (Cel6A, CBHII). The gene and fusion genes were expressed using the cellobiohydrolase 1 (cel7A, cbh1) promoter. Single-copy isogenic transformants in which the expression cassette replaced the cel7A gene were cultivated and analyzed. The transformants expressing the truncated N. flexuosa xyn11A produced clearly increased amounts of both the xylanase/fusion mRNA and xylanase activity compared to the corresponding strains expressing the full-length N. flexuosa xyn11A. The transformant expressing the cel6A CBD-truncated N. flexuosa xyn11A produced about 1.9 g liter-1 of the xylanase in laboratory-scale fermentations. The xylanase constituted about 25% of the secreted proteins. The production of the truncated xylanase did not induce the unfolded protein response (UPR) pathway. However, the UPR was induced when the full-length N. flexuosa xyn11A with an exact fusion to the cel7A terminator was expressed. We suggest that the T. reesei folding/secretion machinery is not able to cope properly with the bacterial CBM when the mRNA of the full-length N. flexuosa xyn11A is efficiently translated.     

Macrophage depletion in the rat after intraperitoneal administration of liposome-encapsulated clodronate: Depletion kinetics and accelerated repopulation of peritoneal and omental macrophages by administration of freund's adjuvant

The purpose of this study was to develop a method for the depletion of macrophages from the peritoneal cavity and the omentum of the rat. Rats received two intraperitoneal injections (at days 0 and 3) with liposome-encapsulated clodronate (dichloromethylene bisphosphonate: Cl₂MBP-liposomes). This treatment resulted in complete elimination of mature tissue macrophages (ED2-positive macrophages) from the peritoneal cavity and the omentum within 2 days. The elimination included the strongly ED2-positive spindle-shaped cells of the omental membrane. Repopulation of the omental ED2-positive macrophages was not seen within the next 23 days. Whereas ED2-positive macrophages were completely depleted, few ED1-positive cells remained and repopulation of ED1-positive cells was faster. The treatment further depleted macrophages from the spleen, especially from the red pulp, parathymic lymph nodes and liver. Freund's incomplete adjuvant administered one day after the last injection of Cl₂MBP-liposomes considerably accelerated repopulation in the omentum. The protocol described might be used to investigate the contribution of mature tissue macrophages to the induction of immune responses, drug metabolism and the elimination of intestinal tumours.     

Myxomycetes developed on litter of common Finnish trees in moist chamber cultures

Fallen leaves were collected from the Finnish trees Alnus gtutinosa & A. incana, Betula pendula & B. pubescens, Picea abies, Pinus sylvestris and Populus tremula , and used to establish 400 moist chamber cultures. From these emerged 132 specimens of Myxomycetes belonging to 14 species. One of them, Didymium dubium Rostaf. was also cultivated from spore to spore in artificial media. The three Arcyria species that emerged developed only on coniferous litter and the four Didymium species only on deciduous litter. Echinostelium minitum de Bary is the only myxomycete species that emerged on leaves of all the five trees.
Alnus litter gave rise to the greatest number of myxomycete specimens. Betula leaves seemed to be the most unfavourable of the substrates. The common species of Myxomycetes that have appeared only on bark of living trees in the moist chambers set up by the author include Paradiacheopsis fimbriata (G. Lister & Cran) Hertel and P. solitaria (Nann.–Brem.) Nann.–Brem. Species occurring only on deciduous leaves or grains are Didymium difforme (Pers.) S. F. Gray, D. dubium Rost. and D. squamulosum (Alb. & Schw.) Fr.     

Release of adenosine triphosphatase from Streptococcus lactis subsp. cremoris membrane: evaluation of carbohydrate in membrane and F1-ATPase preparations by polyacryacrylamide gel electrophoresis

The presence of lipoteichoic acid (LTA) in plasma membrane and released adenosine triphosphatase (ATPase) preparations of Streptococcus lactis subsp. cremoris HA was studied by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE). The membrane preparation gave two spots with periodic acid Schiff's (PAS) staining. The reference LTA revealed one CBB stainable band with MW 21 500, and was detected as a characteristic yellow spot in the molecular weight area 14 000–20 900 with silver staining and was also stainable with PAS. A slight colour was found with PAS in the F₁-ATPase (EC 3.6.1.3) preparation. The results suggest that the carbohydrate component in the membrane preparation and in the solubilized F₁-ATPase is LTA.     

Expression of Escherichia coli PhoE protein in avirulent Salmonella typhimurium aroA and galE strains

Abstract Escherichia coli K-12 PhoE protein is found to be normally expressed and incorporated into the outer membrane of two avirulent Salmonella typhimurium strains, G30 and SH aroA . A hybrid protein which contains an insertion of an antigenic epitope of VP1 protein of foot-and-mouth disease virus into the PhoE protein, was also normally assembled into the Salmonella outer membranes. In the case of the G30 stain, which carries a galE mutation, the inserted epitope is accessible to antibodies in intact cells. In contrast, the epitope is less accessible in the case of the SH aroA strain, probably due to the shielding effect of the O-antigen in this strain.