Analysis of human V H gene repertoire expression in peripheral CD19+ B cells

Using CD19 B-cell selection and polymerase chain reaction-amplified cDNA libraries, we analyzed the peripheral immunoglobulin heavy chain variable repertoire of three healthy adult donors. Here we report that most of the CD19+ circulating B cells expressed unmutated V _H-D-J_H rearrangements. By specific V _H family hybridization, we show that V _H gene family utilization in the periphery roughly corresponds to the complexity of these families in the germline and appears to be relatively constant among the analyzed subjects. However, sequence data of clones picked at random from one IgM cDNA library reveals that in spite of this random utilization, the V _H gene expression in naive circulating B cells is highly biased towards the expression of a limited set of V _H genes. As previously reported by others, this restricted mechanism is also found for the D and J _H segments.The nucleotide sequence data reported in this paper have been submitted to the GenBank/EMBL nucleotide sequence database and have been assigned the accession numbers Z47213-Z47243 and Z47349     

Analysis of spatial and semporal organization in a salmonid brook in relation to physical factors and macrophytic vegetation

Four compartments of a salmonid brook were studied in consecutive sections either at sector scale or at facies scale: physical features, water quality, macrophytes and salmonids. The most important factor in the spatial and temporal organisation was the longitudinal zonation assessed by the four compartments. It was mainly shown by a gradient of the length of the morphodynamic sequence and of the facies width, of the pH and the conductivity and of macrophyte cover. It induced a colonisation by older trout in the downstream part of the brook where growth was better and shelter given by the bankside vegetation was more abundant. There were also greater densities of other age-classes upstream, with a correlation between salmon and rock shelter. Furthermore, the second factor corresponded to the flow characteristics and a granulometry gradient. The third factor corresponded chiefly to lighting, salmon numbers and densities. Salmonids showed a temporal stability from spring to autumn,and an opposition between growth and density. Six clusters of sectors defined functional entities. With regard to the 3—dimensitnal structure of the brook, the special pattern of each compartment shows its contribution to the functioning of the whole. Taking into account the scale of the study, the coexistence between trout and salmon did not show a competition between the two species, but rather a spatial partition, thanks to thehheterogenity inside each sector. We concluded on the necessity of studying sympatry at the facies scale to assess the role of habitat factors as regulators of carrying capacity.     

pAMβ1 resolvase has an atypical recombination site and requires a histone-like protein HU

The broad-host-range plasmid pAMβ1 from Gram-positive bacteria encodes a resolvase, designated Resβ, which shares homology with the proteins of the resolvase—invertase family. Here we report the purification and in vitro characterization of Resβ. This resolvase is particular in two aspects: it has an atypical binding site and requires a cofactor to promote resolution in vitro . Resβ binds to two regions within its resolution site res . One contains two inverted repeats (R1 and R2), the other contains only one repeat (R3). The cofactor required for resolution in vitro is present in crude extracts of both Bacillus subtilis and Escherichia coli and can be substituted by the E. coli histone-like protein HU. The possible mode of action of HU in the resolution process is discussed.     

Presence of pH2-sensitive circulating interferon among Callithrix jacchus marmosets

Significant and relatively stable levels of serum-interferon were demonstrated in a Callithrix jacchus population. This circulating interferon was acid-sensitive in all cases, classifying it as immune or "gamma-type" interferon. Our results in these hematopoietic chimeras suggest that the presence of immune-type or at least pH 2-sensitive interferon could be related to the presence of two allogenic lymphocyte populations in each marmoset.     

What's new in lysozyme research?

The present review is focused on the main achievements realized in the lysozyme research field since the meeting held in 1972 to commemorate the fiftieth anniversary of the discovery of this enzyme. Despite of extensive structural, physico-chemical, crystallographic, genetic, immunological and evolutionary studies devoted to lysozymes, their biological role is still not exactly known.     

Characterization of the amino acids of bovine fibrinogen involved in the fibrinogen-thrombin interaction of the blood clotting process. Comparison with the milk clotting process

Summary Bovine fibrinogen and the A and B chains of bovine fibrinogen have been subjected to chemical modification by a number of reagents and the effects of these procedures on the susceptibility of the proteins to thrombin hydrolysis is described. The reagents used were rose bengal (for photo-oxidation), 2-hydroxy-5-nitrobenzyl bromide, N-acetylimidazole, iodoacetic acid and diethyl pyrocarbonate. Evidence is presented which indicates that the tryptophan and tyrosine residues of fibrinogen are not involved to any great extent in the interaction of this protein with thrombin. Modification with iodoacetic acid suggests that methionine residues play a major role in such interactions, but the fibrinogen chains on which the important residues reside remain uncertain. The use of diethyl pyrocarbonate indicates the participation also of histidine in fibrinogen-thrombin interactions and that, whereas the histidine residues of the B chain are involved to a great extent, it appears that those of the Aa chain are not. The similarities which exist between the fibrinogen-thrombin and the -casein-chymosin systems are discussed.Abbreviations used DEP diethyl pyrocarbonate (ethoxyformic anhydride) - HNBB 2-hydroxy-5-nitrobenzyl bromide - N-Acl N-acetylimidazole - PTC phenylthiocarbamyl - PTH 3-phenyl-2-thiohydantoin.     

Time resolved spectroscopy of the tryptophyl fluorescence of the E. coli LAC repressor.

A new crystal form of a mitogenic lectin from pea seeds ($\text{Pisum sativum}$) has been obtained which is suitable for high resolution structural work. The crystals are orthorhombic, space group P2₁2₁2₁, with unit cell dimensions: $\text{a}$ = 64.2Å, $\text{b}$ = 72. 7Å, $\text{c}$ = 108. 3Å. The asymmetric unit contains one protein molecule.     

Double helical arrangement of spread dinoflagellate chromosomes

Dinoflagellate chromosomes observed in thin section show regular patterns which have been shown to correspond to a liquid crystalline helicoidal arrangement of DNA. Peripheral DNA filaments form a system of loops in the surrounding nucleoplasm. When such chromosomes (studied in Prorocentrum micans) are in presence of water, they extend considerably and form a double helical bundle. At the periphery of these bundles, one observes numerous filaments, which are smooth and devoid of nucleosomes; their diameter is constant.This study, in phase contrast and in electron microscopy, allows statistical measurements. A geometrical model is proposed and shows the simplest way to pass from the intact to the extended form. The liquid crystalline character of the chromosome is probably involved in the extension mechanisms.