Spectral effects of the pupil in fly photoreceptors

Summary Photoreceptors of flies contain pigment granules which upon illumination of the receptors migrate towards the rhabdomere and act as a longitudinal pupil. Data in the literature concerning the effect of the pupil on the spectral sensitivity are contradictory. Therefore spectral sensitivity ofMusca photoreceptors upon light adaptation was reinvestigated.The change in spectral sensitivity of fly photoreceptors upon light adaptation as measured by Hardie (1979) was confirmed. Taking into account waveguide optics this change was explained from absorbance spectra of pupillary granules, measured by microspectrophotometry in squash preparations. Furthermore the pupil absorbance spectrum determined in vivo (Stavenga et al. 1973) was interpreted. The absence of a change in spectral sensitivity upon light adaptation measured by pupillary reflexion (Bernard and Stavenga 1979) is explained by a local-triggering of the pupil.     

TRAP CATCHES OF MUSCA VETUSTISSIMA WALKER (DIPTERA: MUSCIDAE) AND OTHER ARTHROPODS ASSOCIATED WITH CATTLE DUNG IN RELATION TO HEIGHT ABOVE GROUND LEVEL

Abstract
Catches of male and female Musca vetustissima in isolated fly traps located up to 3 m above ground were inversely related to height, but sex ratios and female age-distributions were similar for catches at all heights. Since the effect of height on log catch was highly significant, traps must be operated at a standard height to obtain estimates of fly abundance that are comparable between sampling occasions. Seasonal variation in log catch in relation to height was also highly significant, but was small in comparison to the effects of height. Catches of other dung-frequenting arthropods in pitfall traps were highest at ground level. Very few arthropods were caught in traps located 2 m or more above ground.     

Characterization of Ca2+ release from heterogeneous Ca2+ stores in sarcoplasmic reticulum isolated from arterial and gastric smooth muscle

Ca2+ transport was investigated in vesicles of sarcoplasmic reticulum subfractionated from bovine main pulmonary artery and porcine gastric antrum using digitonin binding and zonal density gradient centrifugation. Gradient fractions recovered at 15-33% sucrose were studied as the sarcoplasmic reticulum component using Fluo-3 fluorescence or 45Ca2+ Millipore filtration. Thapsigargin blocked active Ca2+ uptake and induced a slow Ca2+ release from actively loaded vesicles. Unidirectional 45Ca2+ efflux from passively loaded vesicles showed multicompartmental kinetics. The time course of an initial fast component could not be quantitatively measured with the sampling method. The slow release had a half-time of several minutes. Both components were inhibited by 20 microM ruthenium red and 10 mM Mg2+. Caffeine, inositol 1,4,5-trisphosphate, ATP, and diltiazem accelerated the slow component. A Ca2+ release component activated by ryanodine or cyclic adenosine diphosphate ribose was resolved with Fluo-3. Comparison of tissue responses showed that the fast Ca2+ release was significantly smaller and more sensitive to inhibition by Mg2+ and ruthenium red in arterial vesicles. They released more Ca2+ in response to inositol 1,4,5-trisphosphate and were more sensitive to activation by cyclic adenosine diphosphate ribose. Ryanodine and caffeine, in contrast, were more effective in gastric antrum. In each tissue, the fraction of the Ca2+ store released by sequential application of caffeine and inositol 1,4,5-trisphosphate depended on the order applied and was additive. The results indicate that sarcoplasmic reticulum purified from arterial and gastric smooth muscle represents vesicle subpopulations that retain functional Ca2+ channels that reflect tissue-specific pharmacological modulation. The relationship of these differences to physiological responses has not been determined.     

Altered sensitivity to colchicine and PHA in human cultured cells

Summary PHA-stimulated lymphocytes cultivated from a pair of human monozygotic twins yielded mostly tetraploid cells when colchicine was not used to arrest the metaphases. The rate of tetraploidy was also enhanced by colchicine in fibroblasts cultured without PHA. In in situ condition, larger than usual cells were observed. Other defects found in parental lymphocyte cultures included C-anaphase cells and increased cell aggregation. These results suggest a membrane mutation resulting in hypersensitivity to PHA and variant response to colchicine.     

The future role of bio-ontologies for developing a general data standard in biology: chance and challenge for zoo-morphology

Due to lack of common data standards, the communicability and comparability of biological data across various levels of organization and taxonomic groups is continuously decreasing. However, the interdependence between molecular and higher levels of organization is of growing interest and calls for co-operations between biologists from different methodological and theoretical backgrounds. A general data standard in biology would greatly facilitate such co-operations. This article examines the role that defined and formalized vocabularies (i.e., ontologies) could have in developing such a data standard. I suggest basic criteria for developing data standards on grounds of distinguishing content, concept, nomenclatural, and format standards and discuss the role of data bases and their use of bio-ontologies in current activities for data standardization in biology. General principles of ontology development are introduced, including foundational ontology properties (e.g. class–subclass, parthood), and how concepts are defined. After addressing problems that are specific to morphological data, the notion of a general structure concept for morphology is introduced and why it is required for developing a morphological ontology. The necessity for a general morphological ontology to be taxon-independent and free of homology assumptions is discussed and how it can solve the problems of morphology. The article concludes with an outlook on how the use of ontologies will likely establish some sort of general data standard in biology and why the development of a set of commonly used foundational ontology properties and the use of globally unique identifiers for all classes defined in ontologies is crucial for its success.     

Conformational selection or induced fit? A critical appraisal of the kinetic mechanism

For almost five decades, two competing mechanisms of ligand recognition, conformational selection and induced fit, have dominated our interpretation of ligand binding in biological macromolecules. When binding-dissociation events are fast compared to conformational transitions, the rate of approach to equilibrium, k(obs), becomes diagnostic of conformational selection or induced fit based on whether it decreases or increases, respectively, with the ligand concentration, [L]. However, this simple conclusion based on the rapid equilibrium approximation is not valid in general. Here we show that conformational selection is associated with a rich repertoire of kinetic properties, with k(obs) decreasing or increasing with [L] depending on the relative magnitude of the rate of ligand dissociation, k(off), and the rate of conformational isomerization, k(r). We prove that, even for the simplest two-step mechanism of ligand binding, a decrease in k(obs) with [L] is unequivocal evidence of conformational selection, but an increase in k(obs) with [L] is not unequivocal evidence of induced fit. Ligand binding to glucokinase, thrombin, and its precursor prethrombin-2 are used as relevant examples. We conclude that conformational selection as a mechanism for a ligand binding to its target may be far more common than currently believed.     

La limite Oligocène-Miocène en Limagne : changements fauniques chez les mammifères, oiseaux et ostracodes des différents niveaux de Billy-Créchy (Allier, France)

The lacustrine sequence of Billy-Créchy (Allier) yielded four superposed fossiliferous levels that can be precisely dated for the first time and represent the upper part of the Oligocene and the basis of the Miocene. The age of the localities is given by mammals and particularly by the Rodent and Lagomorph faunas: three are ascribed to the Paleogene mammalian levels MP 29-MP30 and the upper one to the Neogene MN 1. The Paleogene faunas evidence a high degree of similarity with those of the Oligo-Miocene Lower Freshwater Molasse of Switzerland and the localities Créchy 1 and 2 correspond particularly well to the Swiss locality Brochene-Fluh 53, to which a magnetostratigraphic calibration ascribed an age between 24.1 and 23.6 Ma, the date of the Oligo-Miocene boundary being fixed at 23.8 Ma. Changes in the Rodent composition and abundance in these faunas document the impact of the Oligo-Miocene crisis, the uppermost fauna being very impoverished. The avifaunas differ from those of the Aquitanian localities of the Saint-Gérand-le-Puy area by the presence of two forms which are no longer found in the more recent deposits. These birds are mainly aquatic and indicate the proximity of shallow to moderately deep lakes, along the edge of which the Flamingo-related Palaelodidae were nesting. In Ostracod assemblages - numerous along the sequence but in most cases crushed or completely encrusted -, small-sized specimens are abundant, well-preserved, and among them Cypridopsis sp. is dominant; they are represented by adults and juveniles: they indicate shallow-water environmental conditions and unstable environment. Among large specimens, freshwater and brackish species occur; all of them are broken, coated by CaCO3: they belong to different biocenoses and attest some transport.     

Mafb and c-Maf Have Prenatal Compensatory and Postnatal Antagonistic Roles in Cortical Interneuron Fate and Function

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