Host mutant (tabD)-induced inhibition of bacteriophage T4 late transcription: II. Genetic characterization of mutants

In this paper we show that the tabD mutants, selected with ts553 or tsCB53, and described in the accompanying paper (Coppo et al., 1975): (a) are recessive to tab⁺; (b) fail to complement each other, and thus map in the same cistron; (c) by their linkage to rif and their dominance relationships with well characterized amber mutations in the Escherichia coli RNA polymerase operon, probably all map in the gene controlling the synthesis of the β′ subunit of the enzyme. We also describe the isolation of a ts⁺, k^D mutant in phage T4 gene 55, used in the selection of a new tabD mutant (tabD^k292). This tab mutant: (a) generates a defective phenotype which differs somewhat from that of the other tabD mutants; (b) complements the other tabD mutants; (c) by its dominance relationship to amber mutants in the RNA polymerase operon, can be assigned to the structural gene coding for the β subunit of the enzyme.A new type of interaction between T4 genes 55 and 45 is also described. The k^D properties of ts553 (gene 55) are suppressed at 30 °C, by a temperature-sensitive mutation in gene 45. This type of interaction between missense mutations in genes 45 and 55 apparently occurs even in tab⁺ strains, since temperature-sensitive mutations in gene 45 accumulate in lysates of two gene 55 mutants (ts553 and tsA81).     

Algal supplement enhancement of static and recirculating system culture ofMacrobrachium rosenbergii larvae

Summary 1. A comparative study of algal supplement(Phaeodactylum tricornutum) enhancement of static and recirculatingMacrobrachium rosenbergii larval culture was conducted.2. Algal supplements significantly increased larval survival in both static and recirculating culture systems.3. Algal supplements significantly increased postlarval production in both static and recirculating culture systems.4. There was no significant difference in either survival or postlarval production between algal supplemented static and recirculating culture systems.5. The rate of larval development was appreciably increased by the additions of an algal supplement.6. The chemical parameters of water quality monitored (NH₄, NO₂, NO₃) did noch appear to be related to the algal supplement enhancement ofM. rosenbergii larval culture.

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Verbesserung stehender und rezirkulierender Kultursysteme vonMacrobrachium rosenbergii-Larven durch Algenzusatz

Kurzfassung Im Rahmen eines Aquakulturvorhabens wurde geprüft, inwieweit sich die Gegenwart der DiatomeePhaeodactylum tricornutum auf die Zucht der GarneleMacrobrachium rosenbergii (de Man) auswirkt. Als Nahrung für die Larven vonM. rosenbergii dienten in den Versuchsreihen (12 S, 28±1° C, Dauerlicht) Nauplien vonArtemia salina und ab 9. Lebenstag zusätzliche Gaben vonMugil-Rogen. Verglichen mit den Kontrollreihen bewirkte die Gegenwart der Diatomeen (340 000 Zellen/ml) eine signifikant erhöhte Überlebensrate der Larven, und zwar sowohl in stehenden als auch in rezirkulierenden Kultureinheiten. Zudem erreichte eine größere Anzahl von Individuen das Postlarvalstadium, wobei auch die Metamorphose früher als bei den algenfrei gezüchteten Kontrolltieren einsetzte. Wasserchemische Untersuchungen zeigten, daß die verbesserten Zuchterfolge nicht von den gemessenen Konzentrationen der Endprodukte des Stickstoffwechsels (NH ₄ ⁺ , NO ₂ ^– , NO ₃ ^– ) abhängig waren.

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This work (Contribution No. 65 South Carolina Marine Resources Center and contribution No. 43 Grice Marine Biological Laboratory) is a result of research supported by NOAA Office of Sea Grant Department of Commerce, under grants # 04-5-158-5 and # 04-6-158-44009. The U.S. Government is authorized to produce and distribute reprints for governmental purposes notwithstanding any copyright which may appear hereon. Reference to trade names in this paper does not imply endorsement by NOAA Office of Sea Grant or the State of South Carolina.     

The galactomannan-like oligosaccharides from the endosperm of the seed of Gleditsia triacanthos

The endosperm of the seed of Gleditsia triacanthos contains 4.8% of 85% ethanol-soluble, galactomannan-like oligosaccharides having Man:Gal ratios of 1.5–2.6:1 and an average degree of polymerization of 15. They have a narrow distribution of molecular weights and of ratio of components. The oligosaccharides have the gross structure accepted for the galactomannans, namely, a β-(1→4)-linked d-mannopyranosyl backbone having single stubs of α-(1→6)-linked d-galactopyranosyl groups. Some of the lateral chains contain more than one unit, and a minor proportion of the branches are ended by arabinofuranose or fucopyranose residues. Unusual branching points formed by 3,4-linked d-mannosyl, or 3,6-linked d-galactosyl units, or both, were also found. Despite their low molecular weight, the oligosaccharides form aggregates with a structure similar to that of the aggregates of the related galactomannans, but having a lower association energy. This fact, together with the difficulty of combining with more than one partner (due to the short, central chain), results in an increased solubility and in nonviscous solutions. The ¹³C-n.m.r. spectrum differentiated clearly the five structural units of the oligosaccharides, namely, the reducing and nonreducing end-chains of the d-mannosyl backbone; substituted and nonsubstitued, internal β-(1→4)-linked mannopyranosyl units of the backbone; and the galactosyl nonreducing end-chain of the lateral chains. The C-4 signal of the (1→4)-linked d-mannose and the C-6 signal of the same, but substituted, units showed splitting into three lines. The first has been attributed to sequence-related heterogeneity, whereas the latter is tentatively explained by assuming that this resonance is sensitive to whether the mannosyl units linked to that residue are also branched, or not.     

The effects of pH and aluminium toxicity on the growth and symbiotic development of cowpeas (Vigna unguiculata (L.) Walp)

Summary The interaction of pH (4 or 6), aluminium (0 or 16 ppm at pH 4) and N source (symbiotic or combined) on the growth and nutrient status of cowpea (Vigna unguiculata) was studied in a glasshouse experiment.Low pH significantly decreased the growth of the plants dependent on symbiotic nitrogen fixation but at pH 4 the addition of 16 ppm Al further depressed growth in both nitrogen regimes. Al-ions appear to exert their effect primarily on the root system, as shown by the reduction in total length and fresh weight. The symbiotic development of the plants was affected by low pH but more markedly by the Al treatment.Shoot nitrogen concentrations were reduced from ca. 2.6% at pH 6 to 1.8% and 0.9% at pH 4 without and with aluminium respectively. Calcium concentration was decreased by low pH and further by Al in both nitrogen regimes.In all Al-treated plants, the aluminium was mainly accumulated in the roots and was associated with an increase in their phosphorus concentration.     

Comparative phylogenies and host specialization in the alder ectomycorrhizal fungi Alnicola, Alpova and Lactarius (Basidiomycota) in Europe

Background  

Mycorrhizal fungi form intimate associations with their host plants that constitute their carbon resource and habitat. Alnus spp. (Betulaceae) are known to host an exceptional species-poor and specialized ectomycorrhizal (ECM) fungal community compared to other tree species, but the host-specificity pattern and its significance in terms of fungal diversification and speciation remain poorly documented. The degree of parallel speciation, host switching, and patterns of biogeography were explored in the historical associations between alders and three ECM taxa of Basidiomycetes: Alnicola (Agaricales), Alpova (Boletales), and Lactarius (Russulales). The aim was to develop an evolutionary framework on host specificity and diversification of Basidiomycetes in this highly specialized plant-fungus symbiosis.     

Structural requirements for chemotactic activity of leukotriene B4 (LTB4)

LTB4 (5s, 12R dihdroxy-6, 14-CIS-8, 10-trans-eicosatetraenoic acid) formed in activated neutrophils by lipoxygenation of arachidonic acid is an extremely potent chemotaxin. We examined structural requirements for chemotactic and aggregatory activity of the ligand using synthetic LTB4 and several of its isomers. Additionally we examined the potency of two analogs, nor- and homo-LTB4. Dose response curves for neutrophil chemotaxis to these compounds were obtained using a modified Boyden chamber. The mean distance cells moved into the filter was determined after 30 minutes. Peak chemotactic activity of LTB4 was at 10(-7)M. At higher concentrations, chemotactic activity was decreased. The shape of the dose response curve was similar to that of FMLP except that maximum chemotaxis to LTB4 was consistently greater than chemotaxis to FMLP. A mixture of the two epimers at c-5 and c-12 shifted the response curve to the right but did not lower maximum activity. Increasing or decreasing the chain by one carbon between the first hydroxyl group and the carboxyl group also shifted the response curve to the right without lowering maximal activity. Changing the 6 double bond from cis to trans has a greater effect. Activity was only detectable at high concentrations and maximum activity achieved was less than 50% that of LTB4. Thus the chain length between the carboxyl and C-5 hydroxyl groups, the c-5 and c-12 absolute stereochemistry and the stereochemistry of the delta6 double bond are all important structural features for chemotactic activity with delta6 stereochemistry apparently having the greatest contribution. The relative potencies of these compounds in inducing aggregation were comparable to their chemotactic potencies.(ABSTRACT TRUNCATED AT 250 WORDS)     

Dynamic Balancing of Isoprene Carbon Sources Reflects Photosynthetic and Photorespiratory Responses to Temperature Stress

The volatile gas isoprene is emitted in teragrams per annum quantities from the terrestrial biosphere and exerts a large effect on atmospheric chemistry. Isoprene is made primarily from recently fixed photosynthate; however, alternate carbon sources play an important role, particularly when photosynthate is limiting. We examined the relative contribution of these alternate carbon sources under changes in light and temperature, the two environmental conditions that have the strongest influence over isoprene emission. Using a novel real-time analytical approach that allowed us to examine dynamic changes in carbon sources, we observed that relative contributions do not change as a function of light intensity. We found that the classical uncoupling of isoprene emission from net photosynthesis at elevated leaf temperatures is associated with an increased contribution of alternate carbon. We also observed a rapid compensatory response where alternate carbon sources compensated for transient decreases in recently fixed carbon during thermal ramping, thereby maintaining overall increases in isoprene production rates at high temperatures. Photorespiration is known to contribute to the decline in net photosynthesis at high leaf temperatures. A reduction in the temperature at which the contribution of alternate carbon sources increased was observed under photorespiratory conditions, while photosynthetic conditions increased this temperature. Feeding [2-¹³C]glycine (a photorespiratory intermediate) stimulated emissions of [¹³C_1–5]isoprene and ¹³CO₂, supporting the possibility that photorespiration can provide an alternate source of carbon for isoprene synthesis. Our observations have important implications for establishing improved mechanistic predictions of isoprene emissions and primary carbon metabolism, particularly under the predicted increases in future global temperatures.Many plant species emit isoprene (2-methyl-1,3-butadiene [C₅H₈]) into the atmosphere at high rates (Sharkey and Yeh, 2001). With an estimated emission rate of 500 to 750 teragram per year by terrestrial ecosystems (Guenther et al., 2006), isoprene exerts a strong control over the oxidizing capacity of the atmosphere. Due to its high reactivity to oxidants, it fuels an array of atmospheric chemical and physical processes affecting air quality and climate, including the production of ground-level ozone in environments with elevated concentrations of nitrogen oxides (Atkinson and Arey, 2003; Pacifico et al., 2009) and the formation/growth of organic aerosols (Nguyen et al., 2011). At the plant level, isoprene provides protection from stress, through stabilizing membrane processes (Sharkey and Singsaas, 1995; Velikova et al., 2011) and/or reducing the accumulation of damaging reactive oxygen species in plant tissues under stress (Loreto et al., 2001; Vickers et al., 2009b; Velikova et al., 2012). While the mechanism(s) are still under investigation, isoprene may directly or indirectly stabilize hydrophobic interactions in membranes (Singsaas et al., 1997), minimize lipid peroxidation (Loreto and Velikova, 2001), and directly react with reactive oxygen species (Kameel et al., 2014), yielding first-order oxidation products methyl vinyl ketone and methacrolein (Jardine et al., 2012, 2013). The two main environmental drivers for global changes in isoprene fluxes are light and temperature (Guenther et al., 2006). Isoprene production is closely linked to net photosynthesis, and both isoprene emissions and net photosynthesis are controlled by light intensity (Monson and Fall, 1989). There is also a positive correlation between net photosynthesis and isoprene emissions as leaf temperatures increase up to the optimum temperature for net photosynthesis (Monson et al., 1992).Despite the close correlation between photosynthesis and isoprene emissions, plant enclosure observations and leaf-level analyses have both shown that the fraction of net photosynthesis dedicated to isoprene emissions is not constant. During stress events that decrease net photosynthetic rates, isoprene emissions are often less affected or even stimulated; this results in an increase in relative isoprene production from 1% to 2% of net photosynthesis under normal conditions to 15% to 50% under extreme stress (Goldstein et al., 1998; Fuentes et al., 1999; Kesselmeier et al., 2002; Harley et al., 2004). In severe stress conditions such as drought, isoprene emissions can even continue in the complete absence of photosynthesis (Fortunati et al., 2008). An uncoupling of isoprene emissions from net photosynthesis has also been observed in a number of other studies where the optimum temperature for isoprene emissions was found to be substantially higher than that of net photosynthesis; under the high-temperature conditions, isoprene emissions can account for more than 50% of net photosynthesis (Sharkey and Loreto, 1993; Lerdau and Keller, 1997; Harley et al., 2004; Magel et al., 2006).Analyses of carbon sources using ¹³CO₂ leaf labeling have revealed that under standard conditions (i.e. leaf temperature of 30°C and photosynthetically active radiation [PAR] levels of 1,000 µmol m^–2 s^–1), isoprene is produced primarily (70%–90%) using carbon directly derived from the Calvin cycle (Delwiche and Sharkey, 1993; Affek and Yakir, 2002; Karl et al., 2002) via the chloroplastic methylerythritol phosphate (MEP) isoprenoid pathway (Zeidler et al., 1997). The relative contributions of photosynthetic and alternate carbon sources for isoprene are now recognized as being variable under different environmental conditions. Changes in net photosynthesis rates under drought stress (Funk et al., 2004; Brilli et al., 2007), salt stress (Loreto and Delfine, 2000), and changes in ambient O₂ and CO₂ concentrations (Jones and Rasmussen, 1975; Karl et al., 2002; Trowbridge et al., 2012) alter their relative contributions. Under heat stress-induced photosynthetic limitation in Populus deltoides (a temperate species), an increase in the relative contribution of alternate carbon sources was also observed (Funk et al., 2004). However, our current understanding of the responses of isoprene carbon sources to changes in temperature and light levels is poor, and the connection(s) of these responses to changes in leaf primary carbon metabolism (e.g. photosynthesis, photorespiration, and respiration) remains to be determined.Studies over the last decade have shown or suggested that potential alternate carbon sources include refixation of respired CO₂ (Loreto et al., 2004), intermediates from the cytosolic mevalonate (MVA) isoprenoid pathway (Flügge and Gao, 2005; Lichtenthaler, 2010), and intermediates from central carbon metabolism, including pyruvate (Jardine et al., 2010), phosphoenolpyruvate (Rosenstiel et al., 2003), and Glc (Schnitzler et al., 2004). Over 40 years ago, it was also proposed that photorespiratory carbon could directly contribute to isoprene production in plants (Jones and Rasmussen, 1975); however, subsequent studies (Monson and Fall, 1989; Hewitt et al., 1990; Karl et al., 2002) have concluded that photorespiration does not contribute to isoprenoid production.In this study, we examined the carbon composition of isoprene emitted from tropical tree species under changes in light and temperature, the two key environmental variables that affect isoprene emissions. Using a novel real-time analytical approach, we were able to observe compensatory changes in carbon source contribution to isoprene during thermal ramping at high temperatures, despite the overall isoprene emissions remaining relatively stable. By conducting leaf temperature curves under variable ¹³CO₂ concentrations and applying [2-¹³C]Gly leaf labeling, we also reopen the discussion on the role of photorespiration as an alternate source of carbon for isoprenoid formation.     

Dental size and shape in the Roman imperial age: Two examples from the area of Rome

Different socioeconomic strata of Roman imperial age are represented by two large dental samples recovered from archaeological excavations near Rome, Italy. Teeth are investigated for crown dimensions and morphological variants. One sample, comprising 1,465 permanent teeth, represents the rural town of Lucus Feroniae (LFR) and is mainly composed of slaves and war veterans. The other, comprising 734 teeth from the Isola Sacra necropolis at Portus Romae (NIS), represents the “middle class” segment of an urban population. Both series show small dental dimensions and fit at the lower end of the trend toward dental reduction in Europe from the Upper Paleolithic to the historical times. The urban sample is less variable metrically and less sexually dimorphic than the rural one. The analysis of discrete crown traits shows absence of rare phenotypic variants in both series. The urban sample is also less variable in this last respect, suggesting that the gene pool of this particular “stratum” of the NIS population was more homogeneous than that of LFR. The occurrence of enamel hypoplasia indicates that metabolic stress during growth and development was similar in LFR and NIS. The overall set of available data is evaluated in the light of the history of the two Roman sites and the composition of each population. Am J Phys Anthropol 102:469–479, 1997. © 1997 Wiley-Liss, Inc.