Life history traits as predictors of plant rarity, with particular reference to hemiparasiticOrobanchaceae

We made a comparison between life history and reproductive characteristics of a group of Dutch rare (30) and common (105) plant species, all dicotyledonous and insect-visited forbs. The traits life span, clonality, breeding system, seed production, seed dispersal, and soil seed bank longevity are considered. All trait values have been ranked according to their possible effect on the vulnerability of a species for extinction, where low values indicate a low risk and high values a high risk for a species. Rare and common plants differed significantly in four traits: seed production, breeding system, seed bank longevity and clonality. The discriminant analysis showed that 79% of the 135 species was correctly classified in the group they presently belong to. Especially species that are rare now but were much more common 50–100 years ago were classified as being common species, pointing at the detrimental effect of habitat loss these species encountered at which they have not yet been able to adapted to. The data set include eight hemiparasitic plant species (familyOrobanchaceae), of which six are endangered in The Netherlands and two more common. Both rare and common hemiparasites scored high traits values, indicating that they are vulnerable for extinction. The hemiparasites had several characteristics in common: they are all annuals or biennials that have no means of clonal reproduction. They all have non-clustered, zygomorphic flowers that produce nectar and have a precise pollen presentation and are mainly visited by (bumble) bees. Mean life span was significantly shorter in the eight hemiparasiticOrobanchaceae than in the non-hemiparasiticScrophulariaceae used for comparison (4 species). Overall, we concluded that hemiparasitic plants have a special combination of life history traits which makes them vulnerable for local and regional extinction.     

A new sea cow record from the lower Oligocene of western Germany: new indications on the skeletal morphology of Halitherium schinzii (Mammalia: Sirenia)

Since the discovery of the extinct species Halitherium schinzii in the Mainz Basin, sirenian remains from the German Oligocene are usually assigned to this taxon according to the assumption that this would be the only sea cow species there. The attempts of several authors to determine morphological distinctions on the species level remain unconsidered until today. The new find of a partial sea cow skeleton from the lower Oligocene of Bottrop-Kirchheller Heide (western Germany) stirs up the debate on splitting the species currently referred to as H. schinzii. The Bottrop specimen morphologically corresponds to skullcaps from the Mainz Basin and the Belgian Oligocene, which were the basis for the introduction of new species in the past, but are considered synonymous with H. schinzii today. Despite its fragmentary preservation, the new sirenian record reveals shared morphological features mainly referring to the supraoccipital, such as a distinctly rostrad indenting nuchal crest and a reduced external occipital protuberance. These features are in contrast to the prominent morphology of the specimens generally associated with H. schinzii and support the assumed presence of at least two morphotypes in the Oligocene of Central Europe. Additionally, the sea cow from Bottrop-Kirchheller Heide represents the first occurrence of skeletal elements, which are not preserved in the known specimens from this morphotype so far and may contribute to a better understanding of intra- and/or interspecific differences within Sirenia.     

Towards a comprehensive picture of alloacceptor tRNA remolding in metazoan mitochondrial genomes

Remolding of tRNAs is a well-documented process in mitochondrial genomes that changes the identity of a tRNA. It involves a duplication of a tRNA gene, a mutation that changes the anticodon and the loss of the ancestral tRNA gene. The net effect is a functional tRNA that is more closely related to tRNAs of a different alloacceptor family than to tRNAs with the same anticodon in related species. Beyond being of interest for understanding mitochondrial tRNA function and evolution, tRNA remolding events can lead to artifacts in the annotation of mitogenomes and thus in studies of mitogenomic evolution. Therefore, it is important to identify and catalog these events. Here we describe novel methods to detect tRNA remolding in large-scale data sets and apply them to survey tRNA remolding throughout animal evolution. We identify several novel remolding events in addition to the ones previously mentioned in the literature. A detailed analysis of these remoldings showed that many of them are derived from ancestral events.