The effect of L-NAME administrations after oral mucosal incision on wound NO level in rabbit

The aim of the current study was to comparatively investigate the effect of inhibition of nitric oxide (NO) production by N-nitro-L-arginine methyl ester (L-NAME), an isoform non-specific inhibitor of nitric oxide synthase (NOS), after oral mucosal incision on wound tissue NO levels. A standard incision was applied to the oral mucosa of rabbits. After oral mucosal incision, rabbits were divided into five groups as follows: (1) Untreated incisional group (control); (2) Titanium (Ti) implanted group; (3) Ti + Polyethylene glycol (PEG) 4000 implanted group; (4) Ti + PEG 4000 + L-NAME (2 × 10⁻⁴ M) implanted group and (5) i.p. L-NAME administrated group (10 mg/kg). At 5 days after oral incision operations, wound tissue strips and plasma were obtained from rabbits. Oral wound tissue and plasma nitric oxide, plasma thiobarbituric acid reactive substances (TBARS) and total sulfhydryl group (RSH) levels were investigated. Plasma TBARS and NOx levels decreased after i.p. L-NAME administration. Total RSH group levels were not changed in all groups (p>0.05). This means that L-NAME inhibits the deteriorating effects of free radicals without affecting healing. L-NAME in PEG and titanium also has no effect on tissue and plasma NOx levels. These findings indicate that NO generation will not be affected both Ti and local nitric oxide synthase (NOS) inhibitor. (Mol Cell Biochem 278: 65–69, 2005)     

Adsorption of metal complex dyes from aqueous solutions by pine sawdust

An attempt to alleviate the problem caused by the presence of metal complex dyes, mostly used in textile industries, in the textile effluents was undertaken. The effects of adsorbent particle size, pH, adsorbent dose, contact time and initial dye concentrations on the adsorption of metal complex dyes by pine sawdust was investigated. Acidic pH was favorable for the adsorption of metal complex dyes. A contact time of 120 min was required to reach the equilibrium. The experimental isotherm data were analyzed using the Langmuir, Freundlich and Temkin equations. The equilibrium data fit well the Langmuir isotherm. The monolayer adsorption capacities are 280.3 and 398.8 mg dye per g of pine sawdust for Metal Complex Blue and Metal Complex Yellow, respectively. The results indicate that pine sawdust could be employed as low-cost alternative to commercial activated carbon in aqueous solution for the removal of metal complex dyes.     

The agnoprotein of polyomaviruses: a multifunctional auxiliary protein

The late region of the three primate polyomaviruses (JCV, BKV, and SV40) encodes a small, highly basic protein known as agnoprotein. While much attention during the last two decades has focused on the transforming proteins encoded by the early region (small and large T-antigens), it has become increasingly evident that agnoprotein has a critical role in the regulation of viral gene expression and replication, and in the modulation of certain important host cell functions including cell cycle progression and DNA repair. The importance of agnoprotein is underscored by its expression during lytic infection of glial cells by JCV that occurs in progressive multifocal leukoencephalopathy (PML), and also in some JCV-associated human neural tumors particularly medulloblastoma. In this review, we will discuss the structure and function of agnoprotein in the viral life cycle during the course of lytic infection and the consequences of agnoprotein expression for the host cell.     

Late Triassic and Lower Jurassic Foraminifera of the carbonate platform of the Beyaz Aladağ Group (Eastern Taurus,Turkey): New stratigraphic implications

Foraminifera have proven to be reliable biostratigraphic indicators. Accordingly, Triassic and Early Jurassic benthic Foraminifera allow us to define a biostratigraphic zonation within the carbonate platform of Kayseri (Yahyal?), Göksun (Kahramanmara?) and Sivas (Delikta?) regions in the Eastern Taurus (Ceviz, Alada?, Kaman and Felfan Mountains). Seven new stratigraphic sections are described in detail and the first precise inventory and illustration of the benthic foraminifer assemblages from the Triassic successions are presented over a large geographic area. The stratigraphic and palaeontological features of the Lower Mesozoic carbonate units of these mountains include several synchronous transgressive–regressive events that suggest continuity of the Lower Mesozoic environments over a large parautochthonous Taurus zone. Palaeogeographic considerations about the Eastern Taurus carbonates are given, evidencing three stages of development underwent by the studied area: 1) a stable continental margin from Lower Triassic to Lower Cretaceous; 2) a dismantling of the continental margin and first emplacement of ophiolites in the Upper Cretaceous; and 3) a deformation of the continental margin and emplacement of the Peridotite Nappe in the uppermost Cretaceous (Maastrichtian).     

Attitude toward genetic testing for cancer risk in Istanbul

To identify attitudes toward genetic testing, and the effects of this information on decisions regarding issues such as pregnancy, abortion, and prophylactic surgery, several subsets of the Turkish population were surveyed in hospital settings. Individuals (n = 179) chosen arbitrarily from four different subsets of a Turkish population were asked to participate in a confidential 23-question survey. Survey participants were familiar with the concept of cancer being a familial disease (85.5%), and 84.7% of them expressed interest in genetic testing to determine cancer risk, 83.9% would have their fetuses tested for such cancer risk, 65.1% would terminate their pregnancies, 92.2% would have their children tested if they were determined to have an increased cancer risk, 71.9% would agree to undergo prophylactic oophorectomy or orchiectomy and 67.6% would have mastectomy/prostatectomy should there be an increased cancer risk to these organs. It appears that at least the sampled segment of a Turkish population is willing to undergo genetic testing to determine if they are at increased risk for cancer. The feasibility and acceptance of genetic testing and the influence of education and genetic counseling in the Turkish people should further be evaluated with a larger stratified sample of the population.     

Genome-wide integrative analysis revealed a correlation between lengths of copy number segments and corresponding gene expression profile

Microarray analysis has been applied to comprehensively reveal the abnormalities of DNA copy number (CN) and gene expression in human cancer research during the last decade. These analyses have individually contributed to identify the genes associated with carcinogenesis, progression, metastasis of tumor cells and poor prognosis of cancer patients. However, it is known that the correlation between profiles of CN and gene expression does not highly correlate. Factors which determine the degree of correlation remain largely unexplained. To investigate one such factor, we performed trend analyses between the lengths of CN segments and corresponding gene expression profiles from microarray data in hepatocellular carcinoma (HCC) and colorectal carcinoma (CRC). Significant correlations were observed in CN gain of HCC and CRC (p<0.05). The trend of the CN loss showed a significant correlation in HCC although there was no correlation between the length of CN loss segments and gene expression in CRC. Our findings suggest that the influence of CN on gene expression highly depends on the length of CN region, especially in the case of CN gain. To the best of our knowledge, this is the first study describing the correlation between lengths of CNA segments and expression profiles of corresponding genes.     

塔里木胡杨林保护区塔里木马鹿生境动态及其影响因素分析

采用GIS技术,结合实地考察数据和历史数据,通过对信息加工与处理,对1973-2003年间塔里木胡杨林自然保护区马鹿塔里木亚种(Cervus elaphus yarkandensis)分布区的生境动态情况进行了研究,同时对影响塔里木马鹿栖息地变化的主要因素进行了分析。结果表明,自1973-2003年在塔里木胡杨林自然保护区中各种生境类型的变化比较显著,其中(1)水资源严重缺乏,水量剧烈减少,水域面积大幅缩小(2)沙漠面积和低盖度植被面积略有减少,高盖度植被面积减少强烈,保护区内耕地面积快速增加,荒漠化趋势明显,总体上马鹿塔里木亚种分布区的各种生境类型处于变化状态,栖息地环境趋向恶化。     

马鹿线粒体DNA研究新进展

线粒体DNA作为理想的分子遗传标记被广泛应用于马鹿进化生物学、种群遗传学和保护生物学的研究.该文阐述了mtDNA在马鹿中的研究进展,重点介绍马鹿mtDNA序列的研究概况及其多态性在马鹿物种识别、起源和进化、地理分化、遗传多样性和保护管理等方面的应用情况.     

New records of Pseudophoxinus firati from Turkey (Teleostei: Leuciscidae)

Pseudophoxinus firati was described from one spring in the upper Euphrates River drainage in Turkey. Here we record this species from seven additional sites, three in the upper Euphrates drainage, one in the upper Seyhan and three in the upper Ceyhan River drainages. These findings largely expand the distribution area of the species and its habitats are discussed.