Small things are important: the value of singular point elements for birds in agricultural landscapes

Farmland birds belong to the most endangered group of vertebrates in Europe. They are an important component of farmland biodiversity considering the numerous functions they perform (e.g. seed dispersal, improving germination, increasing gene flow, nutrient recycling, and pest control). Therefore, their decline imposes substantial risks on agricultural ecosystems. In general, farmland bird conservation includes land-use and management alterations leading to less-intensive farming and land-sparing for breeding habitats (e.g. agri-environment-climate schemes, and organic farming). However, theoretical concepts describing farmland biodiversity maintenance and applied conservation measures usually ignore the role of singular, often very small, natural or man-made elements in an agricultural landscape. These elements play a role in the populations of certain species, their biology and in the general species richness of farmland. Furthermore, the importance of these elements has never been empirically tested, which means that conservationists and practitioners are not aware of their measurable value for birds. Herein, we define and identify singular point elements in the agricultural landscape (SPELs) which are potentially important for breeding farmland birds. We also describe each SPEL and evaluate its importance for birds in farmland based on a systematic review of the available literature. Using a horizon-scanning technique, we then polled field ornithologists about their personal observations of birds in relation to SPELs and the evaluation of the potential roles of such structures for birds. We identified 17 SPELs that vary in naturalness and age: singular trees, singular shrubs, erratic boulders, puddles, electricity pylons, wind turbines, spiritual sites, hunting platforms, fence and border posts, wells, road signs, scarecrows, piles of manure, piles of brushwood/branches, piles of stones/debris, piles of lime, and haystacks. Analysis of the literature revealed knowledge gaps, because some SPELs are frequently mentioned in ecological studies (e.g. trees, shrubs, pylons), but others such as spiritual sites, stones, hunting platforms, wells, road signs, or piles of lime are ignored. Despite the fact that some authors incorporate the effects of some SPELs in their studies, little research to date has aimed to assess the impact of various SPELs on farmland bird species numbers and distribution. Horizon scanning revealed that ornithologists often observe birds on various SPELs and thus, attribute to SPELs many functions that are important for maintaining bird populations. Horizon scanning also highlighted the importance of SPELs for many declining bird species and suggested possible mitigation of negative changes in the agricultural landscape by retaining SPELs within fields. We suggest that a better understanding of the role of SPELs for farmland birds is required. We also recommend that SPELs are considered as a potential tool for the conservation of birds, and existing conservation programs such as agri-environment-climate schemes and organic farming should be updated accordingly. Finally, we suggest that SPELs are included in predictive models that evaluate habitat suitability for farmland biodiversity.     

Loss of the orphan nuclear receptor SHP is more pronounced in fibrolamellar carcinoma than in typical hepatocellular carcinoma

Hepatocellular carcinoma (HCC) remains a major problem in oncology. The molecular mechanisms which underlie its pathogenesis are poorly understood. Recently the Small Heterodimer Partner (SHP), an orphan nuclear receptor, was suggested to be involved as a tumor suppressor in hepatocellular carcinoma development. To date, there are no such studies regarding fibrolamellar carcinoma, a less common variant of HCC, which usually affects young people and displays distinct morphological features. The aim of our project was to evaluate the SHP levels in typical and fibrolamellar hepatocellular carcinoma with respect to the levels of one of the cell cycle regulators, cyclin D1. We assessed the immunoreactivity levels of SHP and cyclin D1 in 48 typical hepatocellular carcinomas, 9 tumors representing the fibrolamellar variant, 29 non malignant liver tissues and 7 macroregenerative nodules. We detected significantly lower SHP immunoreactivity in hepatocellular carcinoma when compared to non malignant liver tissue. Moreover, we found that SHP immunoreactivity is reduced in fibrolamellar carcinoma when compared to typical hepatocellular carcinoma. We also found that SHP is more commonly lost in HCC which arises in the liver with steatosis. The comparison between the cyclin D1 and SHP expression revealed the negative correlation between these proteins in the high grade HCC. Our results indicate that the impact of loss of SHP protein may be even more pronounced in fibrolamellar carcinoma than in a typical form of HCC. Further investigation of mechanisms through which the loss of SHP function may influence HCC formation may provide important information in order to design more effective HCC therapy.     

Adoptive transfer of mammaglobin-a epitope specific CD8 T cells combined with a single low dose of total body irradiation eradicates breast tumors

Adoptive T cell therapy has proven to be beneficial in a number of tumor systems by targeting the relevant tumor antigen. The tumor antigen targeted in our model is Mammaglobin-A, expressed by approximately 80% of human breast tumors. Here we evaluated the use of adoptively transferred Mammaglobin-A specific CD8 T cells in combination with low dose irradiation to induce breast tumor rejection and prevent relapse. We show Mammaglobin-A specific CD8 T cells generated by DNA vaccination with all epitopes (Mammaglobin-A2.1, A2.2, A2.4 and A2.6) and full-length DNA in vivo resulted in heterogeneous T cell populations consisting of both effector and central memory CD8 T cell subsets. Adoptive transfer of spleen cells from all Mammaglobin-A2 immunized mice into tumor-bearing SCID/beige mice induced tumor regression but this anti-tumor response was not sustained long-term. Additionally, we demonstrate that only the adoptive transfer of Mammaglobin-A2 specific CD8 T cells in combination with a single low dose of irradiation prevents tumors from recurring. More importantly we show that this single dose of irradiation results in the down regulation of the macrophage scavenger receptor 1 on dendritic cells within the tumor and reduces lipid uptake by tumor resident dendritic cells potentially enabling the dendritic cells to present tumor antigen more efficiently and aid in tumor clearance. These data reveal the potential for adoptive transfer combined with a single low dose of total body irradiation as a suitable therapy for the treatment of established breast tumors and the prevention of tumor recurrence.     

Successful elimination of non-neural cells and unachievable elimination of glial cells by means of commonly used cell culture manipulations during differentiation of GFAP and SOX2 positive neural progenitors (NHA) to neuronal cells

Background  

Although extensive research has been performed to control differentiation of neural stem cells – still, the response of those cells to diverse cell culture conditions often appears to be random and difficult to predict. To this end, we strived to obtain stabilized protocol of NHA cells differentiation – allowing for an increase in percentage yield of neuronal cells.     

Differences in prolactin receptor (PRLR) in mouse and human fallopian tubes: evidence for multiple regulatory mechanisms controlling PRLR isoform expression in mice

The anterior pituitary-derived hormone prolactin (PRL) signals through the PRL receptor (PRLR) and is important for female reproductive function in mammals. In contrast to the extensive studies of PRLR expression and regulation in human and mouse ovary and uterus, the mechanisms controlling the regulation of PRLR isoform expression in the fallopian tube are poorly understood. Because dynamic interaction of hormonal signaling in gonadal tissue and the pituitary or in gonadal tissues themselves in mammals suggests endocrine or paracrine regulation of PRLR expression, we questioned whether differential regulation of PRLR isoforms by PRL ovarian-derived estrogen (E(2)) and progesterone (P(4)) exists in the fallopian tube and pituitary of prepubertal female mice. Western blot analysis showed distinct molecular separation of PRLR isoforms in mouse and human fallopian tubes, and cellular localization was found in mouse and human tubal epithelia but not in mouse tubal smooth muscle cells. These data support the concept of an isoform- and cell type-specific expression of PRLR in human and mouse fallopian tubes. Moreover, expression of the long form of PRLR decreased after PRL treatment and increased after blockage of endogenous PRL secretion by bromocriptine (an inhibitor of PRL secretion) in a time-dependent manner in mouse fallopian tube. The opposite regulation was observed in the pituitary. Treatment with exogenous E(2) or P(4) led to changes in PRLR expression in the fallopian tube similar to those of PRL treatment. However, E(2) and P(4) did not affect PRLR expression in the pituitary. Estrogen had no effect on the long form of PRLR expression, whereas P(4) regulated the long form of PRLR in the fallopian tube, as did PRL. Taken together, the data from our comparative study provide evidence that PRLR can be regulated by an interplay of two different mechanisms, PRL or ovarian steroid hormones independently or in combination in a tissue-specific manner. Furthermore, we found that ovarian steroid hormones selectively suppress the expression of PRLR isoforms in mouse fallopian tubes. These findings may contribute to our understanding of the mechanisms controlling PRLR isoform expression in the fallopian tube (in addition to ovary and uterus), with implications for female reproduction.     

aro mutations in Salmonella enterica cause defects in cell wall and outer membrane integrity

In this study we characterized aro mutants of Salmonella enterica serovars Enteritidis and Typhimurium, which are frequently used as live oral vaccines. We found that the aroA, aroD, and aroC mutants were sensitive to blood serum, albumen, EDTA, and ovotransferrin, and this defect could be complemented by an appropriate aro gene cloned in a plasmid. Subsequent microarray analysis of gene expression in the aroD mutant in serovar Typhimurium indicated that the reason for this sensitivity might be the upregulation of murA. To confirm this, we artificially overexpressed murA from a multicopy plasmid, and this overexpression caused sensitivity of the strain to albumen and EDTA but not to serum and ovotransferrin. We concluded that attenuation of aro mutants is caused not only by their inability to synthesize aromatic metabolites but also by their defect in cell wall and outer membrane functions associated with decreased resistance to components of innate immune response.     

Two-dimensional electrophoresis patterns of total proteins,esterases and acid phosphatases from pollen,seeds and leaves of three cultivars of Helianthus annuus L

Total proteins, esterases and acid phosphatases from pollen, seeds and leaves of three sunflower cultivars were separated by 2-D electrophoresis. The characteristic peptides for each cultivar were identified. The seeds and pollen of the cultivar Wielkopolski contained 45 and 37 characteristic peptides, respectively, while the seeds and pollen of Coril contained 73 and 35 characteristic peptides. The cultivar Frankasol had the lowest total number of stained peptides in seeds and pollen, and the number of the characteristic peptides was only 61 and 25, respectively. Analyses of esterases and acid phosphatases from young leaves and pollen led to identification of isoenzymes characteristic of the three cultivars. Only for Frankasol no specific acid phosphatase was observed, both in leaves and in pollen.     

Plant water status and genotype affect fruit respiration in grapevines

An understanding of fruit gas exchange is necessary to determine the carbon balance in grapevines, but little attention has been paid to the relationships among fruit respiration, plant water status and genetic variability. The effect of plant water status and genotype on cluster respiration was studied over two seasons (2013 and 2014) under field conditions using a whole cluster respiration chamber. Whole cluster CO₂ fluxes were measured in growing grapevines at hard-green, veraison and ripening stages under irrigated and non-irrigated conditions, and under light and dark conditions in two grapevine varieties, Tempranillo and Grenache. A direct relationship between cluster CO₂ efflux and plant water status was found at hard-green stage. Genotype influenced the fruit CO₂ efflux that resulted in higher carbon losses in Tempranillo than in Grenache. Fruit respiration rates decreased from the first berry developmental stages to ripening stage. The integration of fruit respiration rates under light and dark conditions showed the magnitude of fruit carbon losses and gains as well as interesting variety and environmental conditions effects on those processes.