Cilia and the cell cycle?

A recent convergence of data indicating a relationship between cilia and proliferative diseases, such as polycystic kidney disease, has revived the long-standing enigma of the reciprocal regulatory relationship between cilia and the cell cycle. Multiple signaling pathways are localized to cilia in mammalian cells, and some proteins have been shown to act both in the cilium and in cell cycle regulation. Work from the unicellular alga Chlamydomonas is providing novel insights as to how cilia and the cell cycle are coordinately regulated.     

Evidence for the monophyletic evolution of benzylisoquinoline alkaloid biosynthesis in angiosperms

Benzylisoquinoline alkaloids (BIAs) consist of more than 2500 diverse structures largely restricted to the order Ranunculales and the eumagnoliids. However, BIAs also occur in the Rutaceae, Lauraceae, Cornaceae and Nelumbonaceae, and sporadically throughout the order Piperales. Several of these alkaloids function in the defense of plants against herbivores and pathogens - thus, the capacity for BIA biosynthesis is expected to play an important role in the reproductive fitness of certain plants. Biochemical and molecular phylogenetic approaches were used to investigate the evolution of BIA biosynthesis in basal angiosperms. The occurrence of (S)-norcoclaurine synthase (NCS; EC 4.2.1.78) activity in 90 diverse plant species was compared to the distribution of BIAs superimposed onto a molecular phylogeny. These results support the monophyletic origin of BIA biosynthesis prior to the emergence of the eudicots. Phylogenetic analyses of NCS, berberine bridge enzyme and several O-methyltransferases suggest a latent molecular fingerprint for BIA biosynthesis in angiosperms not known to accumulate such alkaloids. The limited occurrence of BIAs outside the Ranunculales and eumagnoliids suggests the requirement for a highly specialized, yet evolutionarily unstable cellular platform to accommodate or reactivate the pathway in divergent taxa. The molecular cloning and functional characterization of NCS from opium poppy (Papaver somniferum L.) is also reported. Pathogenesis-related (PR)10 and Bet v 1 major allergen proteins share homology with NCS, but recombinant polypeptides were devoid of NCS activity.     

A twisted four-sheeted model for an amyloid fibril

The formation of amyloid fibers and their deposition in the body is a characteristic of a number of devastating human diseases. Here, we propose a structural model, based on X-ray diffraction data, for the basic structure of an amyloid fibril formed by using the variants of the B1 domain of IgG binding protein G of Streptococcus. The model for the fibril incorporates four beta sheets in a bundle with a diameter of 45 A. Its cross-section, or layer, consists of four strands, one strand from each sheet. Layers stack on top of each other to form the fibril, which has an overall helical twist with a periodicity of about 154 A. Each strand interacts in a parallel fashion with the strands in the layers above and below it, in an infinite beta sheet. Some geometric features of this model and the logic behind it may be applicable for constructing other related cross-beta amyloid fibrils.     

Cellular imaging of inflammation after experimental spinal cord injury

The ability to visualize the cellular inflammatory responses after experimental spinal cord injury (SCI) was investigated using a clinical 1.5-T magnetic resonance imaging scanner, a custom-built, high-strength gradient coil insert, a 3-D fast imaging employing steady-state acquisition (FIESTA) imaging sequence and a superparamagnetic iron oxide (SPIO) contrast agent. An "active labeling" approach was used, with SPIO administered intravenously at different time points following SCI. Our results show that this strategy can be used to visualize clusters of iron-labeled cells associated with the inflammatory response in SCI. Of particular importance for this application was the finding that in FIESTA images hemorrhage does not cause signal loss. In T2-weighted spin echo or T2*-weighted gradient-echo images, which are more commonly used to detect signal loss associated with SPIO, the signal loss associated with hemorrhage interferes with the detection of iron-induced signal loss. FIESTA, therefore, allowed us to discriminate between iron associated with blood products in hemorrhage that occurs in acute SCI and the iron associated with SPIO-labeled cells accumulating in the injured cord.     

Cooperative research sheds light on population structure and listing status of threatened and endangered rockfish species

Population genetics has increasingly become an important tool for determining appropriate taxonomic units for managing species of conservation interest. Yelloweye rockfish (Sebastes ruberrimus), canary rockfish (S. pinniger) and bocaccio (S. paucispinis) in the inland waterways of Puget Sound (PS), WA, USA were listed under the U.S. Endangered Species Act (ESA) in 2010. These listings relied heavily on evidence from other species that these populations were ‘discrete’ taxonomic units because little information was available for these species in PS. To fill this data gap, we collaborated with recreational fishing communities in PS to collect tissue samples and used population genetics analyses to determine whether samples from PS were genetically differentiated from samples collected from the outer coasts of the U.S. and Canada. Multiple analyses using restriction-site associated DNA sequencing data showed that yelloweye rockfish in PS and British Columbia, Canada were genetically different from coastal populations, while canary rockfish showed no genetic differentiation. These results support hypotheses that the genetic connectivity of rockfish populations is based on interactions between life-history characteristics and oceanographic conditions. These data also support the ESA designation status and the expansion of protected geographical boundaries for yelloweye rockfish but also suggest canary rockfish in PS are not a ‘discrete’ population and may not meet the first criterion of the ESA, as initially assumed. Collaboration among agencies and fishing communities, and cost-efficient genetic analyses provided a framework for collecting and analyzing data essential to the conservation and management of threatened and endangered species.     

Immunohistochemical analysis of the adaptation of adult guinea-pig cardiomyocytes in long-term cultures and in cocultures with cardiac neurons: A novel model for studies of myocardial function

In this study, we used laser confocal scanning microscopy and immunofluorescent markers to describe the establishment of long-term cultures of adult guinea-pig cardiomyocytes and their cocultures with adult intrinsic cardiac neurons. We have also investigated the effect of plating density on the adaptation of the myocytes in culture. Providing that the preparation of freshly isolated cardiomyocytes consists mostly (> 80%) of rod-shaped, Ca-tolerant, and quiescent cells and these are plated under optimal conditions and density (105/cm2), these myocytes have the following characteristics: (1) they remain elongated with regular ultrastructural characteristics and quiescent for several days; (2) within 10-14 days, they reestablish their intercellular contacts and resume contractile activity, which becomes synchronous all through the confluent layers; (3) they retain their regular myofibrilar striation all through the adaptation to culture conditions without any sign of dedifferentiation or redifferentiation; (4) these characteristics are lost when the cells are plated at too low (< 104/cm2) or too high (2 × 105/cm2) a density and they exhibit signs of dedifferentiation; (5) the adult ventricular myocytes appear to retain their ability to express atrial natriuretic peptide (ANP), as indicated by immunoreactivity to anti-ANP antibody; (6) this activity seems to be directly related to the surface area of the myocytes in contact with the substrate (i.e. to the stretch of the myocytes); (7) the intrinsic cardiac neurons grow intricate networks of neurites, which form a free-ending type of contact with the cocultured myocytes.abstract typed in here; if it is more than one paragraph use Long-term cultures of adult guinea-pig ventricular myocytes, alone or in their cocultures with cardiac neurons in which both are fully active functionally, provide a valuable experimental model which opens new possibilities for studying the cellular and molecular regulation of myocardial function under acute or chronic effects of various intrinsic and/or extrinsic factors, including neuroregulation.