Metabolism of polychlorinated biphenyls by Solanum nigrum hairy root clone SNC-9O and analysis of transformation products

The study investigates aspects of PCB metabolism by a hairy root culture of Solanum nigrum L. (clone SNC-9O) in vitro. Standard conditions were established for efficient, up to 72% PCB conversion (22 individual PCB congeners examined in commercial mixture Delor 103, 5 g fresh biomass in 100 ml media shaken with 5 mg PCB for 14 days). The conversion products formed from three monochlorobiphenyls were monohydroxychlorobiphenyls and dihydroxychlorobiphenyls, while six dichlorobiphenyls yielded different monohydroxydichlorobiphenyls. Efficiency of the transformation of individual PCB congeners was evaluated together with phytotoxic effect on the clone SNC-9O. Major metabolites of monochlorobiphenyls analysed after extraction from biomass were hydroxylated at the position 4, and 4′, respectively. This revised version was published online in June 2006 with corrections to the Cover Date.     

The last population of the Woodland Brown butterfly (<Emphasis Type="Italic">Lopinga achine</Emphasis>) in the Czech Republic: habitat use,demography and site management

The distribution of Lopinga achine (Lepidoptera Nymphalidae, Satyrinae) in the Czech Republic has declined from thirty grid squares before 1950 to just one extant population, restricted to a single area of deciduous woodland. A review of historical sites shows that this species used to occur in various types of deciduous woodland with a relatively sparse canopy maintained by coppicing and/or grazing. The extant population inhabits mature woodland with a mean canopy cover of 60% (quartiles 50% and 65%), sparse shrubs and a species-rich herb layer containing plant species requiring dry, warm and nutrient-poor conditions. The larval host plants are the fine-leafed sedges, Carex fritschii and C. michelii. In 2006, the total population contained about 10,000 adults but this may be an over-estimate, biased by male behaviour. Measurements of adult mobility, well approximated by an inverse-power function, suggested that all existing colonies are interconnected by dispersal. Continuing existence of the population depends on two conditions; nutrient-poor conditions for a diverse ground flora and a sparse tree canopy. While canopy closure is gradually increasing, the herb layer is threatened by soil enrichment due to the demise of traditional grazing, litter raking and grass mowing in woodlands. Any future management to favour Lopinga achine should include both measures to maintain a sparse canopy and measures to export biomass, such as raking or mowing of ground flora or, preferably, re-establishment of grazing. An erratum to this article can be found at     

Application of KDE+ software to identify collective risk hotspots of ungulate-vehicle collisions in South Tyrol,Northern Italy

This paper is the first dealing with animal-vehicle collisions (AVC) with red and roe deer in South Tyrol, Northern Italy. The Autonomous Province of Bolzano (South Tyrol) has been collecting AVC data since 2012 on the entire provincial road network. Each year, AVC data accounted for more than 700 cases per year, with several socioeconomic and ecological implications. The aim of this research is to identify the locations where AVC occur more frequently than expected (hotspots) and better outline subsequent implementation of mitigation measures. For an effective identification of AVC hotspots, we applied a combined methodology of temporal and spatial analysis on AVC data collected on the South Tyrol road network in the years 2012–2014. AVC data enabled the identification of the temporal patterns, which showed different behaviors of the two target species in close proximity of the road network and throughout the 12 months. The KDE+ software applied to the 2012–2014 AVC database allowed for spatial analysis and the identification of hotspots, i.e., the road sections having the highest risk for drivers. The integration of the results, coming from the abovementioned methodologies, contributes to a detailed assessment of roads that would allow the identification of the local contributing factors and a base-line of potential problematic areas that will highlight the need for further investigation to assess whether the risk-rank is accurate and allocate effectively limited resources to a feasible number of identified hotspots and reduce the current degree of AVC in the South Tyrolean road network.     

Smaller fields support more butterflies: comparing two neighbouring European countries with different socioeconomic heritage

Changing landscape configuration, a component of landscape heterogeneity, due to varying arable field size represents an attribute of farmland intensification with potentially grave consequences for biodiversity. We recorded butterflies in an intensively farmed region along the border of two European countries with contrasting socioeconomic heritage, one with small farms (Poland), the other with huge farmed units (Czech Republic). Although only the most common generalist species occurred in our records, we observed 2.3× more individuals and 1.9× more species in Poland, and the differences withstood robust statistical controls. Different socioeconomic heritage—in this case, different policies of two communist regimes, one tolerating small family farms and the other expropriating them—influence biodiversity long after the policies that shaped the respective landscapes had been abandoned.     

Annual and intra-annual growth dynamics of <Emphasis Type="Italic">Myricaria elegans</Emphasis> shrubs in arid Himalaya

Key message

To disentangle complex drivers of Myricaria elegans growth in arid Himalaya, we combined tree-ring analysis with detailed dendrometer records. We found that the combination of winter frost, summer floods, and strong summer diurnal temperature fluctuations control annual and intra-annual growth dynamics. The relative importance of these drivers is, however, changing with ongoing climate change.

Abstract

High-mountain areas are among the most sensitive environments to climate change. Understanding how different organisms cope with ongoing climate change is now a major topic in the ecology of cold environments. Here, we investigate climate drivers of the annual and intra-annual growth dynamics of Myricaria elegans, a 3–6 m tall tree/shrub, in a high-elevation cold desert in Ladakh, a rapidly warming region in the NW Himalayas. As Myricaria forms narrow stands around glacier streams surrounded by the desert, we hypothesized that its growth between 3800 and 4100 m will be primarily limited by low temperatures and summer floods. We found that warmer and less snowy conditions in April and May enhance earlywood production. Latewood formation is mostly driven by the June–July temperatures (T). The positive effect of warmer summers on both annual and intra-annual growth is related to fluctuating daily T (from +30 to 0 °C). In particular, dendrometer measurements over a 2-year period showed that net daily growth increments increased when the summer night T remained above 6 °C. While high night T during generally cold desert nights promoted growth, high daytime T caused water stress and growth inhibition. The growth–temperature dependency has gradually weakened due to accelerated warming since the 1990s. In addition, positive latewood responses to high March precipitation during the colder 1960s–1980s have become negative during the warmer 1990s–2000s, reflecting an intensification of summer floods. Latewood width increased while earlywood width decreased from the 1990s, indicating a prolonged growing season and a higher risk of drought-induced embolism in earlywood vessels. Due to a multiplicity of environmental drivers including winter frost, intensified floods and strong summer diurnal T fluctuations, Myricaria growth is not controlled by a single climate parameter. Similar results are increasingly reported from other Himalayan treelines, showing that ongoing climate change will trigger complex and probably spatially variable responses in tree growth. Our study showed that these complex climatic signals can be disentangled by a combination of long-term data from tree-rings with detailed, but short-term, records from dendrometers.

     

Neuron-Specific Enolase Is Correlated to Compromised Cerebral Metabolism in Patients Suffering from Acute Bacterial Meningitis; An Observational Cohort Study

Introduction

Patients suffering from acute bacterial meningitis (ABM) with a decreased level of consciousness have been shown to have an improved clinical outcome if treated with an intracranial pressure (ICP) guided therapy. By using intracranial microdialysis (MD) to monitor cerebral metabolism in combination with serum samples of biomarkers indicating brain tissue injury, S100B and Neuron Specific Enolase (NSE), additional information might be provided. The aim of this study was to evaluate biomarkers in serum and MD parameters in patients with ABM.

Methods

From a prior study on patients (n = 52) with a confirmed ABM and impaired consciousness (GCS ≤ 9, or GCS = 10 combined with lumbar spinal opening pressure > 400 mmH₂O), a subgroup of patients (n = 21) monitored with intracerebral MD and biomarkers was included in the present study. All patients were treated in the NICU with intracranial pressure (ICP) guided therapy. Serum biomarkers were obtained at admission and every 12 hours. The MD parameters glucose, lactate, pyruvate and glycerol were analyzed. Outcome was assessed at 12–55 months after discharge from hospital. Mann-Whitney U-Test and Wilcoxon matched-pairs signed rank test were applied.

Results

The included patients had a mean GCS of 8 (range, 3–10) on admission and increased ICP (>20 mmHg) was observed in 62% (n = 13/21) of the patients. Patients with a lactate:pyruvate ratio (LPR) >40 (n = 9/21, 43%) had significantly higher peak levels of serum NSE (p = 0.03), with similar, although non-significant observations made in patients with high levels of glycerol (>500 μmol/L, p = 0.11) and those with a metabolic crisis (Glucose <0.8 mmol/L, LPR >25, p = 0.09). No associations between serum S100B and MD parameters were found. Furthermore, median MD glucose levels decreased significantly between day 1 (0–24h) and day 3 (48–72h) after admission to the NICU (p = 0.0001). No correlation between MD parameters or biomarkers and outcome was found.

Conclusion

In this observational cohort study, we were able to show that cerebral metabolism is frequently affected in patients with ABM. Furthermore, patients with high LPR (LPR>40) had significantly higher levels of NSE, suggesting ongoing deterioration in compromised cerebral tissue. However, the potential clinical impact of MD and biomarker monitoring in ABM patients will need to be further elaborated in larger clinical trials.     

Cytokeratins and cytokeratin filaments in subpopulations of cultured human and rodent cells of nonepithelial origin: modes and patterns of formation

Using immunofluorescence microscopy, we observed that in several established cell culture lines derived from different nonepithelial tissues and species, cells spontaneously emerge, usually at low frequencies, which contain cytoplasmic structures decorated by antibodies specific for cytokeratins 8 and 18. This phenomenon was further examined at both the protein (gel electrophoreses of cytoskeletal proteins, followed by immunoblotting) and the RNA (Northern blots, "nuclear run-on" analysis, in situ hybridization) level. Positive cell lines included simian virus (SV40)-transformed human fibroblasts (HF-SV80, WI-38 VA13), human astrocytic glioma cells (U333 CG/343MG), rat (RVF-SMC) and hamster (BHK-21/13) cells derived from vascular smooth muscle and murine sarcoma MS-180 cells. In two cell lines (HF-SV80 and BHK-21/13), the frequency of the cytokeratin-containing cells and of the cytokeratin fibril arrays per cell was drastically increased upon treatment with 5-azacytidine. The structural appearance of the cytokeratins was variable in the different cell lines but could also differ among cells of the same culture: While small granular or comma-shaped structures or bizarrely shaped filament arrays prevailed in WI-38, RVF and normally grown BHK-21 cells, most of the other lines revealed extended normal-looking, fibrillar arrays. In one line (MS-180), the appearance of cytokeratins was associated with a morphological change, as it was only found in a subpopulation of cells that had lost their typical elongated and spindle-shaped phenotype and assumed a rounded ("coccoid") shape. Our results show that the expression of the genes encoding cytokeratins 8 and 18 is not necessarily restricted to programs of epithelial differentiation and that factors stochastically effective appear in cultured cell lines that allow the synthesis of these cytoskeletal components. Mechanisms possibly involved in this spontaneous and selective advent of cytokeratins 8 and 18 and implications for tumor diagnosis are discussed.     

Models for the perception of orientation in random dot patterns

The aim of this paper is to summarize and to compare some known mathematical models of orientation perception in random dot patterns and to propose new solutions of this question. The model adequacy is judged from the previously obtained experimental results. Apart from the models based on some simple function of the coordinates of dots forming a pattern, also models derived from the so-called image function of the pattern are analysed. The latter ones were found more flexible to render the different features of experimentally obtained data, mainly in the case of orientation ambiguity for some special patterns. The stochastic variants of the deterministic models are introduced.