A rapid chemiluminescent DNA hybridization assay for the detection of Chlamydia trachomatis

With an estimated 3–4 million new cases per year, human infections from Chlamydia trachomatis are probably the most prevalent sexually transmitted disease (STD) in the United States. Diagnosis of Chlamydia is usually conducted by tissue culture methods. Direct immunofluorescence and ELISA tests have become available, but there remains a need for a test with better specificity and sensitivity. In response to this need, we have developed a rapid DNA hybridization assay using synthetic oligonucleotide probes to detect the presence of the Chlamydia trachomatis specific 7.4 kb plasmid. The assay involves solution phase hybridization of unlabelled probes, rapid capture of the probe-target duplex onto a microtitre dish surface, a new signal amplification technique that employs chemically cross-linked oligonucleotides, and an alkaline phosphatase labelled probe. Signal is obtained by reacting the labelled probe-target complex with an enzyme triggerable dioxetane substrate. Detection of the chemiluminescent output is performed either with a luminometer or by exposure to instant film. All 15 serovars of Chlamydia trachomatis react positively while organisms known to co-inhabit the human urogenital tract react negatively.     

Evolution of arthropod hemocyanins and insect storage proteins (hexamerins)

Crustacean and cheliceratan hemocyanins (oxygen-transport proteins) and insect hexamerins (storage proteins) are homologous gene products, although the latter do not bind oxygen and do not possess the copper- binding histidines present in the hemocyanins. An alignment of 19 amino acid sequences of hemocyanin subunits and insect hexamerins was made, based on the conservation of elements of secondary structure observed in X-ray structures of two hemocyanin subunits. The alignment was analyzed using parsimony and neighbor-joining methods. Results provide strong indications for grouping together the sequences of the 2 crustacean hemocyanin subunits, the 5 cheliceratan hemocyanin subunits, and the 12 insect hexamerins. Within the insect clade, four methionine- rich proteins, four arylphorins, and two juvenile hormone-suppressible proteins from Lepidoptera, as well as two dipteran proteins, form four separate groups. In the absence of an outgroup sequence, it is not possible to present information about the ancestral state from which these proteins are derived. Although this family of proteins clearly consists of homologous gene products, there remain striking differences in gene organization and site of biosynthesis of the proteins within the cell. Because studies on 18S and 12S rRNA sequences indicate a rather close relationship between insects and crustaceans, we propose that hemocyanin is the ancestral arthropod protein and that insect hexamerins lost their copper-binding capability after divergence of the insects from the crustaceans.      

植物抗病基因工程进展(续)

植物抗病基因工程进展（续）洪剑明印莉萍邱泽生（首都师范大学生物系北京１０００３７）ＰＲＯＧＲＥＳＳＯＦＧＥＮＥＴＩＣＥＮＧＩＮＥＥＲＩＮＧＦＯＲＰＬＡＮＴＤＩＳＥＡＳＥＲＥＳＩＳＴＡＮＣＥＨＯＮＧＪｉａｎＭｉｎｇＹＩＮＬｉＰｉｎｇＱＩＵＺｅＳｈ...     

Population structure in the American oyster as inferred by nuclear gene genealogies

Multiple haplotypes from each of three nuclear loci were isolated and sequenced from geographic populations of the American oyster, Crassostrea virginica. In tests of alternative phylogeographic hypotheses for this species, nuclear gene genealogies constructed for these haplotypes were compared to one another, to a mitochondrial gene tree, and to patterns of allele frequency variation in nuclear restriction site polymorphisms (RFLPs) and allozymes. Oyster populations from the Atlantic versus the Gulf of Mexico are not reciprocally monophyletic in any of the nuclear gene trees, despite considerable genetic variation and despite large allele frequency differences previously reported in several other genetic assays. If these populations were separated vicariantly in the past, either insufficient time has elapsed for neutral lineage sorting to have achieved monophyly at most nuclear loci, or balancing selection may have inhibited lineage extinction, or secondary gene flow may have moved haplotypes between regions. These and other possibilities are examined in light of available genetic evidence, and it is concluded that no simple explanation can account for the great variety of population genetic patterns across loci displayed by American oysters. Regardless of the source of this heterogeneity, this study provides an empirical demonstration that different sequences of DNA within the same organismal pedigree can have quite different phylogeographic histories.      

Acute lesions of the ventromedial hypothalamus reduce sympathetic activation and thermogenic changes induced by PGE1

The aim of this experiment was to evaluate the effects of an intracerebroventricular (icv) injection of prostaglandin E1 (PGE₁) on the sympathetic activation and the thermogenic changes in rats with acute lesions of the ventromedial hypothalamus (VMH). Four groups of six Sprague-Dawley male rats were anesthetized with ethyl-urethane. The firing rate of the sympathetic nerves innervating the interscapular brown adipose tissue (IBAT) and the colonic and IBAT temperatures were monitored both before and after one of the following treatments: 1) VMH lesion plus icv injection of PGE₁ (500 ng); 2) VMH lesion plus icv injection of saline; 3) sham lesion plus icv injection of PGE₁; and 4) sham lesion plus icv injection of saline. PGE₁ induced an increase in the firing rate of IBAT nerves and the colonic and IBAT temperatures. These effects were reduced by VMH lesion. The findings indicate that acute lesions of the VMH reduce the effects of PGE₁ and seem to suggest a possible role played by the VMH in the control of the sympathetic activation and the thermogenic changes during PGE₁ hyperthermia.     

Satellite Evidence of Phenological Differences Between Urbanized and Rural Areas of the Eastern United States Deciduous Broadleaf Forest

We used a 10-year record (1990–99) of composited and cloud-screened reflectances from the Advanced Very High Resolution Radiometer (AVHRR) to test for phenological differences between urban and rural areas in the eastern United States deciduous broadleaf forest (DBF). We hypothesized that well-documented urban heat island effects would be associated with alterations in temperature-sensitive vegetation phenology. Our objectives were thus (a) to investigate possible differences in the start of the growing season (SOS) and end of the growing season (EOS) between the urban and DBF land covers, (b) to investigate related differences in greenness amplitude and fractional cover, and (c) to develop a generalized additive model (GAM) to predict the spatial variation of observed differences. By analyzing individual 1° latitude by 1° longitude blocks, we found that, on average, urbanization is associated with a growing season expansion of 7.6 days. Most of this effect is caused by an earlier SOS in urban areas. In all cases, urban regions had lower fractional cover and greenness amplitude. The GAM model failed to produce a viable model for differences in EOS, probably because it is dominated by photoperiod controls with only a minor temperature impact. SOS differences were predicted with an accuracy of about 2.4 days, with a GAM consisting of smoothed functions of mean annual average temperature, urban fractional cover, and the urban vs DBF greenness amplitude difference. We speculate that evidence of a phenological response to warming indicates that global warming, without reduction in DBF vegetation cover and greenness amplitude, may increase carbon sequestration in mesic deciduous forests. Received 6 June 2001; accepted 23 October 2001.     

Leaf architecture characters of <i>Vachellia tortilis</i> (Forssk.) Galasso and Banfi along longitudinal gradient in Limpopo Province,South Africa

This paper looked at the leaf architecture characteristics of Vachellia tortilis to determine if either there is or not an effect of the tropic line on plants. Vachellia tortilis leaves were sampled along a national road (N1) in Limpopo province. Sampling points were set 10 km apart away from the Tropic of Capricon in opposite directions. Leaf morphology revealed that leaves of V. tortilis are bipinnately compound with alternate arrangement. The venation pattern of the pinnules was eucamptodromus and brochidodromous with imperfect reticulation. Areoles were imperfect and pentagonal or irregular in shape.