Species traits in relation to temporal and spatial heterogeneity in streams: a test of habitat templet theory

1. The habitat templet approach depends on defining templet axes appropriate to the organism(s) of interest, predicting the traits of species associated with different parts of the templet, and testing these predictions in a range of habitats whose positions in the templet have been determined. 2. In this study of thirty-five benthic insect taxa at fifty-four tributary sites of the Taieri River on the South Island of New Zealand, we chose as the temporal axis the intensity/frequency of disturbance, defined in terms of bed movement during high discharge events. As the spatial axis, we postulated that three features would provide refugia and therefore ameliorate disturbance—percentage of the bed with low shear stress, percentage of the bed made up of large substratum particles and availability of interstitial space in the bed—from which we derived a combined multivariate refugium axis. 3. More disturbed communities contained a significantly higher percentage of individuals possessing the following traits: small size, high adult mobility, habitat generalist (each predicted to confer resilience in response to disturbance), clinger, streamlined/flattened and with two or more life stages outside the stream (each predicted to confer resistance in the face of disturbance). When analyses were performed on the percentage of taxa having particular traits, the predicted positive relationships with average bed movement were found for high adult mobility and habitat generalist traits. 4. The percentage of variance in trait scores explained by intensity of disturbance was generally higher in sites with less refugia available and lower in sites further from the headwaters. The percentage of variance explained was higher in sites recently subject to a major high discharge disturbance, suggesting that disturbances tend to strengthen the pattern of preponderance of resilience/resistance traits. 5. We mapped insect taxa onto the two-dimensional templet, following Grime et al.’s triangular terrestrial plant classification. The full variety of resistance and resilience traits were represented in insect species throughout the templet, but taxa associated with more disturbed conditions generally displayed a larger number of resilience and resistance traits, combined, than taxa associated with more stable stream beds.     

Detritivores in Kenyan highland streams: more evidence for the paucity of shredders in the tropics?

1. The relationship between coarse particulate organic matter (CPOM) standing stock and benthic macroinvertebrate assemblages in Kenyan highland streams was determined by sampling seven sites on three rivers (2000–2700 m a.s.l.). Taxa recorded were allocated to functional feeding groups using published literature, mouthpart analysis and examination of gut contents. Patterns were compared with five structurally similar streams in three areas of Europe (south-west France, south-east England, north-east England).
2. Number of individuals and proportion of detritivores in Kenyan streams were equivalent to, or greater than, those in European sites. Shredders were, however, almost completely absent from Kenyan sites, despite high standing stocks of CPOM. Shredders were abundant in all European sites.
3. The phenomenon of low shredder abundance has been observed in other tropical streams in south-east Asia and Central and South America but, in contrast to these regions, the African rivers studied were devoid of shrimps or fish which may occupy the shredding niche elsewhere.
4. These preliminary data suggest that shredder-mediated detritus processing, which is a key functional component of streams in the North Temperate Zone, does not operate in East African streams. There are three possible reasons for this. The first is that tropical African rivers are functionally different to those in temperate regions. This could be because of enhanced microbial activity replacing shredder activity at high temperatures. Alternatively, it could be a result of low palatability of detrital inputs from dominant riparian trees in the region. The second and third are methodological: that our allocation to functional feeding groups is incorrect, and that our sampling methods missed a potentially key shredding taxon – the freshwater crab Potamonautes sp.     

Unravelling evolutionary lineages among South African velvet worms (Onychophora: Peripatopsis) provides evidence for widespread cryptic speciation

The endemic South African velvet worm genus Peripatopsis currently contains eight recognized species described from variable morphological characters and the current taxonomy is unsatisfactory. In an attempt to investigate evolutionary relationships within Peripatopsis, we collected 137 individuals from 34 sample localities for six of the eight species. Sequence data derived from two partial mitochondrial (mt)DNA gene loci (COI and 12S rRNA), as well as partial sequence data from the ribosomal nuclear 18S rDNA locus in combination with gross morphological characters and scanning electron microscopy (SEM), was used to examine evolutionary relationships. Phylogenetic relationships were investigated using minimum evolution (ME) and Bayesian inferences (BI). Additionally, we also undertook a maximum likelihood (ML) analyses on the combined DNA sequence data set. The combined DNA evidence topologies derived from the ME, BI, and ML was highly congruent and was characterized by the presence of multiple lineages within recognized taxa. Peripatopsis clavigera, Peripatopsis moseleyi, and Peripatopsis sedgwicki each comprised two evolutionary lineages; Peripatopsis capensis comprised three; and Peripatopsis balfouri comprised six operational taxonomic units respectively. Genealogical exclusivity at both mtDNA and nuclear DNA among the geographically coherent groups coupled with pronounced sequence divergence suggested a two‐fold increase in the number of species within Peripatopsis. Previously used gross morphological characters (such as the number of leg pairs and colour) were either highly variable within operational taxonomic units, or were invariant, suggesting that alternative morphological characters are necessary for species discrimination. SEM results revealed potentially useful diagnostic characters that can discriminate between at least discriminate some of the newly‐identified lineages. © 2009 The Linnean Society of London, Biological Journal of the Linnean Society 2009, 97 , 200–216.     

Dissolved carbon leaching from soil is a crucial component of the net ecosystem carbon balance

Estimates of carbon leaching losses from different land use systems are few and their contribution to the net ecosystem carbon balance is uncertain. We investigated leaching of dissolved organic carbon (DOC), dissolved inorganic carbon (DIC), and dissolved methane (CH₄), at forests, grasslands, and croplands across Europe. Biogenic contributions to DIC were estimated by means of its δ¹³C signature. Leaching of biogenic DIC was 8.3±4.9 g m^?2 yr^?1 for forests, 24.1±7.2 g m^?2 yr^?1 for grasslands, and 14.6±4.8 g m^?2 yr^?1 for croplands. DOC leaching equalled 3.5±1.3 g m^?2 yr^?1 for forests, 5.3±2.0 g m^?2 yr^?1 for grasslands, and 4.1±1.3 g m^?2 yr^?1 for croplands. The average flux of total biogenic carbon across land use systems was 19.4±4.0 g C m^?2 yr^?1. Production of DOC in topsoils was positively related to their C/N ratio and DOC retention in subsoils was inversely related to the ratio of organic carbon to iron plus aluminium (hydr)oxides. Partial pressures of CO₂ in soil air and soil pH determined DIC concentrations and fluxes, but soil solutions were often supersaturated with DIC relative to soil air CO₂. Leaching losses of biogenic carbon (DOC plus biogenic DIC) from grasslands equalled 5–98% (median: 22%) of net ecosystem exchange (NEE) plus carbon inputs with fertilization minus carbon removal with harvest. Carbon leaching increased the net losses from cropland soils by 24–105% (median: 25%). For the majority of forest sites, leaching hardly affected actual net ecosystem carbon balances because of the small solubility of CO₂ in acidic forest soil solutions and large NEE. Leaching of CH₄ proved to be insignificant compared with other fluxes of carbon. Overall, our results show that leaching losses are particularly important for the carbon balance of agricultural systems.     

Overwintering of Venturia inaequalis the causal agent of apple scab in relation to weather

Apple leaves collected at East Mailing and bearing colonies of Venturia inaequalis were exposed outdoors from November 1978 to May 1979 at 12 United Kingdom sites. Pseudothecial development and abundance were recorded from samples returned to East Mailing every 2 wk. Pseudothecia matured most rapidly with high rainfall in November and high temperatures in spring. Mature pseudothecia were most abundant with low temperatures in November and low rainfall in spring. In 1979-80 a cross-over experiment, in which scabbed leaves spent either November-January or February-April at a common site, and the other half of the winter at one of five sites, demonstrated the separate effects of weather following leaf-fall and in the spring. Equations for forecasting the time to pseudothecial maturity, but not the numbers of mature pseudothecia, were obtained. Experiments in controlled environments demonstrated the importance of low temperature and high moisture for initiation and early development of pseudothecia, but a controlled increase of temperature in the spring did not result in faster rates of maturation compared with lower temperatures outdoors. Ascospore production from leaves kept in controlled environments in spring was consistently lower than from leaves kept outside.     

Genetic variability in intergenic spacers of ribosomal DNA in Pisolithus isolates associated with pine, eucalyptus and Afzelia in lowland Kenyan forests

Basidiocarps of Pisolithus associated with indigenous ( Afzelia quanzensis Welw.) and introduced ( Pinus caribaea Mor. and Eucalyptus camaldulensis Dehnh.) hosts in the lowland forests of the Coast Province of Kenya are morphologically distinct. Genetic variability among 52 Pisolithus basidiocarps, collected beneath the various host plants, was examined based on sequence polymorphism within the internal transcribed spacer (ITS) and intergenic spacer (IGS1) of ribosomal DNA genes. Variability in ITS and IGS1 sequences indicated that the three host-associated morphotypes were genetically different. Consensus trees generated by bootstrap analysis of sequence data of Pisolithus isolates from Australia and Kenya are polyphyletic and strongly suggest that the three different morphotypes/genotypes present in Kenya represent separate biological species. In addition, our data indicate that little genetic exchange occurs in silva between these species.     

Phenotypic changes and reduced genetic diversity have accompanied the rapid decline of the garden tiger moth (Arctia caja) in the U.K.

Abstract 1. Previous studies have quantified the recent decline of numerous Lepidopteran species in the U.K., including the garden tiger moth (Arctia caja), in which abundance has decreased by 85% over the past 30 years. At the same time that overall numbers have been falling, the distribution of abundance of this species has been moving northwards. In this study, morphological and genetic data were used to investigate the possibility that these changes in abundance and distribution have been accompanied by microevolutionary changes. 2. A comparison of wing size and shape in current and historical moth samples revealed that wing shape has altered significantly over the past century, resulting in longer, narrower hindwings and narrower forewings for a given forewing length. Habitat fragmentation and increased suitability of northerly sites provide a plausible explanation for the selection of increasingly dispersive individuals. 3. Mitochondrial DNA revealed no phylogeographic structuring either before or after the population decline. However, a comparison of mtDNA haplotypes from current and museum specimens indicated that the recent population decline across the U.K. has been accompanied by a significant loss of genetic diversity. 4. The changes in wing shape suggest recent adaptation to environmental change, whereas a loss of genetic diversity may limit the ability of garden tiger moths to adapt to future environmental change.     

Sporulation of Septoria nodorurn (and S. tritici) on spring wheat cvs Kolibri and Maris Butler in relation to growth stage, plant part and time of season

Sporulation of Septoria nodorum was assessed on inoculated spring wheat cvs Kolibri and Maris Butler. The time from inoculation to first production of spores (latent period) was similar over a range of constant temperatures (12–18°C) but was shorter for Kolibri at 6°C and at 24°C. Spore production was greatest during the period of stem extension and, for equal amounts of disease, was twice as great on Kolibri as on Maris Butler. Spore production on leaves was much more intense with Septoria tritici than S. nodorum for equal amounts of disease, and was less intense on heads than on leaves for both pathogens. Inoculation of plants resulted in significant losses in yield. Mans Butler consistently out-performed Kolibri on each component of yield. Kolibri was particular affected: 1000-grain weights were reduced at each growth stage tested especially by S. nodorum, grain numbers and yield/head were reduced particularly following inoculation at heading. Spore production of S. nodorum during the period of stem extension increased to a peak in early July and then declined but no reliable relationship with monitored weather accounted for this seasonal trend.     

A DNA test to sex most birds

Birds are difficult to sex. Nestlings rarely show sex-linked morphology and we estimate that adult females appear identical to males in over 50% of the world's bird species. This problem can hinder both evolutionary studies and human-assisted breeding of birds. DNA-based sex identification provides a solution. We describe a test based on two conserved CHD (chromo-helicase-DNA-binding) genes that are located on the avian sex chromosomes of all birds, with the possible exception of the ratites (ostriches, etc.; Struthioniformes). The CHD-W gene is located on the W chromosome; therefore it is unique to females. The other gene, CHD-Z, is found on the Z chromosome and therefore occurs in both sexes (female, ZW; male, ZZ). The test employs PCR with a single set of primers. It amplifies homologous sections of both genes and incorporates introns whose lengths usually differ. When examined on a gel there is a single CHD-Z band in males but females have a second, distinctive CHD-W band.     

Origins and biomechanical evolution of teeth in echinoids and their relatives

Abstract:  Echinoid teeth are without doubt the most complex and highly specialized skeletal component to have evolved in echinoderms. They are biomechanically constructed to be resilient and tough while maintaining a self-sharpening point. Based on SEM analysis of isolated tooth elements collected primarily from the Ordovician and Silurian of Gotland, we provide a detailed structural analysis of the earliest echinoderm teeth. Eight distinct constructional designs are recognized encompassing various degrees of sophistication, from a simple vertical battery of tooth spines to advanced teeth with multiple tooth plate series and a reinforced core of fibres. These provide key data from which we reconstruct the early stages of tooth evolution. The simplest teeth are composed of stacked rod-like elements with solid calcite tips. More advanced teeth underwent continuous replacement of tooth elements, as a simple self-sharpening mechanism. Within echinoids tooth design was refined by evolving thinner, flatter primary plates with buttressing, allowing maintenance of a sharper and stronger biting edge. Despite the obvious homology between the lanterns of ophiocistioids and echinoids, their teeth are very different in microstructural organization, and they have evolved different self-sharpening mechanisms. Whereas echinoid teeth evolved from a biseries of mouth spines, ophiocistioid goniodonts evolved from a single series of mouth spines. Rogeriserra represents the most primitive known battery of tooth elements but its taxonomic affinities remain unknown.