Temporal response of stream benthic macroinvertebrate communities to the synergistic effects of anthropogenic acidification and natural drought events

1. We evaluated whether the surprisingly weak biological recovery associated with declines in acid deposition were related to drought‐induced re‐acidification of streams. We used test site analysis (TSA) to characterise temporal changes (1995–2003) in the degree and nature of impairments to stream benthic macroinvertebrate (BMI) communities influenced by acid deposition and drought. 2. The BMI communities in four historically impacted test streams were compared with communities in 30 minimally impacted reference streams. Six multivariate (e.g. ordination axes scores) and four traditional (e.g. % Diptera) summary metrics were used to describe BMI communities. Using all metrics simultaneously (i.e. Mahalanobis or generalised distance), the TSA provided a single probability that a test community was impaired. If a test community was significantly impaired, a further analysis was done to identify the metric(s) important in distinguishing the test community from reference condition. 3. Results of the TSAs indicated that the generalised distances between test communities and the reference condition were inversely related to stream water pH (n = 36). The TSAs also indicated ordination metrics based on BMI abundance were important in distinguishing significantly impaired communities from reference conditions. Temporal trends indicated that there has been short‐term recovery of these BMI communities, but that overall improvements have been hampered by acid or metal toxicity associated with drought‐induced re‐acidification of the streams. 4. Our use of a variety of summary metrics to obtain a single statistical test of significance within the context of the reference‐condition approach provided a simple and unambiguous framework for evaluating the biological condition of test sites.     

Nuclear Genome Sequence Survey of the Dinoflagellate Heterocapsa triquetra

ABSTRACT. Dinoflagellates have among the largest nuclear genomes known, but we know little about their contents or organisation. Given the interest in dinoflagellate ecology, cell biology, and evolutionary biology, there are many reasons to thoroughly investigate the contents of dinoflagellate genomes, but because of their large size the only thorough samples to date have relied on expressed sequence tag surveys to analyse cDNAs. To complement this, there are some studies of the physical properties of dinoflagellate chromosomes, but no direct survey of the nature of the sequences contained within them. To start to build a picture of the contents of these genomes, we have sequenced over 230,000 bp from the nuclear genome of Heterocapsa triquetra, which has been estimated to be 18–23 billion base pairs in total. The survey includes one putative gene with two relict spliced leaders, one putative pseudogene, and a small number of low‐complexity repeats, transposons, and other putative selfish elements, all of which account for about 5% of the survey. Another 5% of the survey was long, complex repeats, some highly represented. By far the greatest fraction of the survey (89.5%) is made up of non‐repeated sequence with no similarity to any other known sequence.     

Do introduced North American beavers Castor canadensis engineer differently in southern South America? An overview with implications for restoration

• 1 Twenty‐five pairs of North American beavers Castor canadensis Kuhl were introduced to Tierra del Fuego Island in 1946. The population has expanded across the archipelago, arriving at the Chilean mainland by the mid‐1990s. Densities range principally between 0.5–2.05 colonies/km. They have an impact on between 30–50% of stream length and occupy 2–15% of landscape area with impoundments and meadows. Beaver impacts constitute the largest landscape‐level alteration in subantarctic forests since the last ice age.
• 2 The colonization pattern, colony densities and impacted area indicate that habitat in the austral archipelago is optimal for beaver invasion, due to low predator pressure and suitable food resources. Nothofagus pumilio forests are particularly appropriate habitat, but a more recent invasion is occurring in adjacent steppe ecosystems. Nonetheless, Nothofagus reproductive strategies are not well adapted to sustain high beaver population levels.
• 3 Our assessment shows that at the patch‐scale in stream and riparian ecosystems, the direction and magnitude of exotic beaver impacts are predictable from expectations derived from North American studies, relating ecosystem engineering with underlying ecological mechanisms such as the relationships of habitat heterogeneity and productivity on species richness and ecosystem function.
• 4 Based on data from the species' native and exotic range, our ability to predict the effects of beavers is based on: (i) understanding the ecological relationships of its engineering effects on habitat, trophic dynamics and disturbance regimes, and (ii) having an adequate comprehension of the landscape context and natural history of the ecosystem being engineered.
• 5 We conclude that beaver eradication strategies and subsequent ecosystem restoration efforts, currently being considered in southern Chile and Argentina, should focus on the ecology of native ecosystems rather than the biology of this invasive species per se. Furthermore, given the nature of the subantarctic landscape, streams will probably respond to restoration efforts more quickly than riparian ecosystems.

     

Evaluating habitat effects on population status: influence of habitat restoration on spring-run Chinook salmon

1. A key element of conservation planning is the extremely challenging task of estimating the likely effect of restoration actions on population status. To compare the relative benefits of typical habitat restoration actions on Pacific salmon (Oncorhynchus spp.), we modelled the response of an endangered Columbia River Chinook salmon (O. tshawytscha) population to changes in habitat characteristics either targeted for restoration or with the potential to be degraded. 2. We applied a spatially explicit, multiple life stage, Beverton‐Holt model to evaluate how a set of habitat variables with an empirical influence on spring‐run Chinook salmon survivorship influenced fish population abundance, productivity, spatial structure and diversity. Using habitat condition scenarios – historical conditions and future conditions with restoration, no restoration, and degradation – we asked the following questions: (i) how is population status affected by alternative scenarios of habitat change, (ii) which individual habitat characteristics have the potential to substantially influence population status and (iii) which life stages have the largest impact on population status? 3. The difference in population abundance and productivities resulting from changes in modelled habitat variables from the ‘historical’ to ‘current’ scenarios suggests that there is substantial potential for improving population status. Planned restoration actions directed toward modelled variables, however, produced only modest improvements. 4. The model predicted that population status could be improved by additional restoration efforts directed toward further reductions in the percentage of fine sediments in the streambed, a factor that has a large influence on egg survival. Actions reducing fines were predicted to be especially effective outside the national forest that covers most of the basin. Scenarios that increased capacity by opening access to habitat in good condition also had a positive but smaller effect on spawner numbers. 5. Degradation in habitat quality, particularly in percent fine sediments, within stream reaches located in the national forest had great potential to further reduce this population’s viability. This finding supports current forest planning efforts to minimise road density and clear‐cut harvests and to return forest stand structure in dry regions to the historical condition that promoted frequent low‐intensity fires rather than catastrophic stand‐replacing fires, as these landscape factors have been shown to influence percent fine sediment in streams. 6. Together, these results suggest that planning focusing on protecting currently good habitat, reducing fine sediments to promote egg survival and increasing spawner capacity will be beneficial to endangered spring‐run Chinook population status.     

Ecological Genetics of Tetrahymena thermophila: Mating Types, i-Antigens, Multiple Alleles and Epistasis

Until recently, Tetrahymena thermophila has rarely been isolated from nature. With improved sampling procedures, T. thermophila has been found in ponds in many northeastern states. The availability of resident populations makes possible both population and ecological genetic studies. All seven known mating types have been recovered; no eighth mating type has been found. Crosses among whole-genome homozygotes derived from Pennsylvania isolates reveal a spectrum genotypes with mating type alleles resembling traditional A (IV- and VII-) and B(I-) categories. The genotypes differ significantly with respect to mating type frequency, both among themselves and from previously described genotypes. One A-category genotype appears to lack mating type II, while one A-category and all B-category genotypes have low frequencies of mating type III, thus accounting for the low frequency of III in the pond. The low frequency of III in all five B-category genotypes examined suggests that the founding allele in this region was low for III. These and other differences are discussed both in terms of mating type frequencies in the pond and in terms of the possible molecular structure of mat alleles. By contrast, numerous variants of the cell surface immobilization antigen are found in addition to the previously described i-antigens. Variants of the known SerH alleles include those with restriction fragment length polymorphisms and temperature sensitivity as well as alleles with new antigenic specificity. Multiple alleles are present in single ponds. Genes exhibiting serially dominant epistasis over SerH genes also are found. In two instances (K and C), families of antigenically similar polypeptides are expressed in place of H i-antigen. Molecular weight differences suggest that these paralogous i-antigen genes evolve by gene duplication and unequal crossing over within central repeats. The existence of complex patterns of epistasis together with seasonal changes in i-ag frequencies suggest that i-ag play an important, but as yet unknown, ecological role related to the occurrence of frequent conjugation.     

Influence of Photoperiod, Daylength, and Feeding Schedule on Tadpole Growth and Development

The metamorphic rate of Rana pipiens tadpoles was studied under different photoperiods, daylengths, and feeding schedules. Tail resorption and hindlimb growth and development induced by immersion in 30 μg/l thyroxine (T₄) were accelerated under longer photoperiods and continuous light when 6L: 18D, 12L: 12D, 18L: 6D, and 24L regimes were compared. Constant light exposure did not produce faster development than an 18 hr photoperiod, and initially was less effective. The rate of spontaneous and T₄-induced metamorphosis was greater the shorter the day on 9L:9D, 12L: 12D, or 15L: 15D cycles, although all groups received the same overall amount of light, but in different dosages. When feeding schedule but not the LD cycle was varied, groups of tadpoles fed on 18, 24, or 30 hr regimes showed no differences in growth and development rate on 19L: 5D, and only random variations under continuous light. Differences in metamorphic rate on 18, 24, or 30 hr days are not due to the feeding schedules, but to the LD cycles. From these experiments we conclude that illumination, particularly the length and frequency of the photoperiod, affects the utilization of T₄. Development rates independent of the total amount of illumination, but related to daylength and light schedule, suggest interaction of light with an endogenous timing mechanism.     

Why do host‐deprived seed beetles ‘dump’ their eggs?

Abstract.  If host seeds are absent, females of the seed beetle Callosobruchus maculatus sometimes 'dump' eggs on unsuitable substrates, which causes complete larval mortality and decreases female lifespan. To understand the possible function of this behaviour, the present study examines genetic variation in dumping behaviour between and within populations. When deprived of hosts, females from an African population are much more prone to dump eggs than Asian females, most of which dump no eggs over their lifetimes. Egg dumping therefore cannot be explained as a simple, species-wide constraint imposed by the accumulation of mature oocytes. A transfer experiment tested the hypothesis that dumping eggs improves a female's ability to exploit the subsequent availability of seeds, perhaps by preventing a disruption of oocyte maturation. Contrary to prediction, the number of eggs laid after females are transferred to seeds is inversely related to the number dumped during deprivation. Two bidirectional selection experiments revealed heritable variation in egg-dumping behaviour within the African population. Deprived females from the dumper line dump more than twice as many eggs as do females from the nondumper line. Pre-adult development time is significantly longer in the nondumper line, which suggests that trade-offs with other fitness components could maintain variation in egg-laying behaviour within populations. The divergent responses to host availability by African and Asian females may represent a pleiotropic effect of similarly divergent responses to host quality.     

Seed weight and seed number affect subsequent fitness in outcrossing and selfing Primula species

Using the outcrossing Primula farinosa and its autogamous selfing relatives P. scotica , P. scandinavica and P. stricta , we compared the fitness of light and heavy seeds. Heavy seeds germinated in greater numbers and more quickly. In competition with seedlings grown from lighter seeds, heavy seeds produced larger rosettes. In P. farinosa such seedlings went on to produce more seeds, and in two populations heavier seeds, than plants from lighter seeds. After transplantation to natural populations, seedlings of P. farinosa derived from heavy seeds produced larger rosettes, more flowers and seeds than those from lighter seeds in certain populations so that seedlings born of heavy seeds were much fitter than seedlings from lighter seeds. Average seed weight varied in inverse proportion to seed number per capsule. The autogamous species produced on average about twice as many seeds per capsule as P. farinosa . In P. scotica and P. stricta this difference appears to be due in part to assured fertilization, but this high fecundity did not cause disadvantageously light seeds. As these species produced fewer capsules per scape, their overall seed production was on average no greater than for P. farinosa . P. farinosa traded-off fitness between capsules with large seed numbers, which donated more offspring to the next generation, and those with small seed numbers, whose heavy seeds would be more likely to reproduce themselves in the next generation. We conclude that low fecundity in outcrossing species might at times be advantageous.