Spatial distribution of communal nests in a colonial breeding bird: benefits without costs?

Abstract The spatial organization of individuals, or groups of individuals, within a population can provide valuable information about social organization and population dynamics. We analysed the spatial distribution of nests of the sociable weaver (Philetairus socius) on two farms in the Kalahari. Sociable weavers build large communal nests on big savannah trees, forming a pattern of trees with and without nests. We used two spatial statistics, Ripley's K and the pair correlation function, to describe characteristics of the point patterns over a range of distances. (i) At distances of 200 and 300 m, communal nests were clustered. (ii) At distances greater than 1000 m, communal nests were regularly distributed. These findings are independent of the spatial distribution of trees. Furthermore, we used Moran's I to analyse spatial autocorrelation of nest sizes. We expected negative autocorrelation because of competition between nests. But on both farms there was no significant autocorrelation of nest sizes for any distance class. The regular distribution observed at larger distances may indicate competition and/or territoriality among different nests, but the lack of spatial autocorrelation between nest sizes suggests that these interactions may happen between nest clusters rather than between single nests. This was confirmed by significant clustering of nests on small scales. We thus suggest, that colonies of P. socius consist of several nests on adjacent trees forming a cluster of subcolonies. The question why sociable weavers establish subcolonies instead of adding more chambers to the natal nest, could not simply be answered by limitation of nesting space. We suggest a strategy to avoid costs due to increasing colony size.     

The geographic structure of morphological variation in eight species of fiddler crabs (Ocypodidae: genus Uca) from the eastern United States and Mexico

Species with larger geographic distributions are more likely to encounter a greater variety of environmental conditions and barriers to gene flow than geographically‐restricted species. Thus, even closely‐related species with similar life‐history strategies might vary in degree and geographic structure of variation if they differ in geographic range size. In the present study, we investigated this using samples collected across the geographic ranges of eight species of fiddler crabs (Crustacea: Uca) from the Atlantic and Gulf coasts of North America. Morphological variation in the carapace was assessed using geometric morphometric analysis of 945 specimens. Although the eight Uca species exhibit different degrees of intraspecific variation, widespread species do not necessarily exhibit more intraspecific or geographic variation in carapace morphology. Instead, species with more intraspecific variation show stronger morphological divergence among populations. This morphological divergence is partly a result of allometric growth coupled with differences in maximum body size among populations. On average, 10% of total within‐species variation is attributable to allometry. Possible drivers of the remaining morphological differences among populations include gene flow mediated by ocean currents and plastic responses to various environmental stimuli, with isolation‐by‐distance playing a less important role. The results obtained indicate that morphological divergence among populations can occur over shorter distances than expected based on dispersal potential. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 100 , 248–270.     

Influence of water abstraction on the macroinvertebrate community gradient within a glacial stream system: La Borgne d'Arolla, Valais, Switzerland

1. Water abstraction from glacial rivers is an important characteristic of hydroelectric power schemes in Alpine regions. Streams in the Valais region of Switzerland have been particularly affected. 2. Invertebrate distributions are described in La Borgne d'Arolla, a glacial stream with icemelt-, snowmelt- and groundwater-dominated tributaries. The icemelt-dominated streams have been affected by abstractions for more than 30 years. 3. The glacial streams contain only Chironomidae (Diamesa), and are devoid of fauna for between 200 and 500 m below the glacier snouts. 4. Immediately below the water intakes the streams are intermittent, flowing only during system purges and high floods, and are devoid of fauna for short distances (<1.5km). 5. Further downstream, abstraction of glacial meltwater increases the importance of snowmelt and groundwater, increasing water temperatures, improving water clarity and increasing the length of krenal/rhithral streams at the expense of kryal streams. 6. A community including Chironomidae, Simuliidae, Baetidae, Nemouridae, Limnephilidae and Chloroperlidae occurs as soon as a permanent flow is maintained by tributary runoff, and the channel becomes stable. 7. A wide range of taxa inhabit snowmelt- and groundwater-dominated tributary streams with stable channels, often at much higher altitudes than the main river. The tributaries provide sources for rapid colonization of the main channel following ice retreat or physical disturbance. 8. Purges and high floods are important disturbances within the main channel. Recovery may be rapid because of drift from tributaries, but sites influenced by frequent disturbances have reduced faunas in comparison to stable channel sites. 9. This study supports the model proposed by Milner & Petts (1994) and shows that deterministic responses of macroinvertebrate communities may be observed to changes of temperature, turbidity, flow regime and channel stability.     

Habitat and resource use by larval and juvenile fishes in an arid-land river (Rio Grande, New Mexico)

1. Studies of mesic temperate and tropical rivers suggest an important role for floodplain habitats as nursery areas for larval and juvenile fishes. In arid‐land rivers the extent and duration of flooding is diminished and habitats and resources used by larval fishes are poorly known. Our study documented habitat and resource use of larval fishes in the Rio Grande, New Mexico, an arid‐land river. 2. Spatial and temporal distribution of larval and juvenile fishes and their inferred microhabitat preferences were studied during spring, summer and autumn, 2003. Stable carbon (¹³C : ¹²C) and nitrogen (¹⁵N : ¹⁴N) isotope ratios were measured to identify nutrient sources and characterise trophic positions of young‐of‐year fishes in this system. 3. Some fishes recruited during high flows (in spring), whereas others recruited during low‐flow periods in late summer. Regardless of the timing of reproduction, microhabitats with lower current velocity and higher temperature appeared to serve as vital nursery grounds for Rio Grande fishes. Ephemeral backwaters and disconnected side channels held the highest abundance and diversity of larvae and juveniles. 4. Stable isotope analyses revealed that fish larvae obtained carbon predominately from algal production in early summer, but used organic carbon derived from emergent macrophytes as river discharge decreased in mid‐summer. This shift may have been facilitated by microinvertebrate prey that grazed down edible algae and then switched to macrophytes in mid‐summer. Nitrogen isotope ratios did not differ among species or early life stages, suggesting that larval and juvenile fishes use similar food resources, especially when restricted to isolated pools in summer.     

How much time can herbivore protection buy for coral reefs under realistic regimes of hurricanes and coral bleaching?

Coral reefs have been more severely impacted by recent climate instability than any other ecosystem on Earth. Corals tolerate a narrow range of physical environmental stress, and increases in sea temperature of just 1 °C over several weeks can result in mass coral mortality, often exceeding 95% of individuals over hundreds of square kilometres. Even conservative climate models predict that mass coral bleaching events could occur annually by 2050. Unfortunately, managers of coral‐reef resources have few options available to meet this challenge. Here, we investigate the role that fisheries conservation tools, including the designation of marine reserves, can play in altering future trajectories of Caribbean coral reefs. We use an individual‐based model of the ecological dynamics to test the influence of spatially realistic regimes of disturbance on coral populations. Two major sources of disturbance, hurricanes and coral bleaching, are simulated in contrasting regions of the Caribbean: Belize, Bonaire, and the Bahamas. Simulations are extended to 2099 using the HadGEM1 climate model. We find that coral populations can maintain themselves under all levels of hurricane disturbance providing that grazing levels are high. Regional differences in hurricane frequency are found to cause strikingly different spatial patterns of reef health with greater patchiness occurring in Belize, which has less frequent disturbance, than the Bahamas. The addition of coral bleaching led to a much more homogenous reef state over the seascape. Moreover, in the presence of bleaching, all reefs exhibited a decline in health over time, though with substantial variation among regions. Although the protection of herbivores does not prevent reef degradation it does delay rates of coral loss even under the most severe thermal and hurricane regimes. Thus, we can estimate the degree to which local conservation can help buy time for reefs with values ranging between 18 years in the Bahamas and over 50 years in Bonaire, compared with heavily fished systems. Ultimately, we demonstrate that local conservation measures can benefit reef ecosystem services but that their impact will vary spatially and temporally. Recognizing where such management interventions will either help or fail is an important step towards both achieving sustainable use of coral‐reef resources and maximizing resource management investments.     

Characterization of simple sequence repeat markers derived in silico from Brassica rapa bacterial artificial chromosome sequences and their application in Brassica napus

A collaborative Brassica rapa genome sequencing project is currently in progress to aid the identification of agronomically important traits in Brassica species. As an initial stage, the ends of over 110 000 bacterial artificial chromosome clones were sequenced and mined for simple sequence repeats (SSRs). We present the characterization of 40 of these SSRs and their application in Brassica napus. The markers were screened against six Brassica species and Arabidopsis, and demonstrated reliable amplification, genome specificity, cross‐amplification and significant polymorphism. These SSRs will be useful for genetic analysis of Brassica germplasm.     

fingerprint: visual depiction of variation in multiple sequence alignments

There is a lack of programs available that focus on providing an overview of an aligned set of sequences such that the comparison of homologous sites becomes comprehensible and intuitive. Being able to identify similarities, differences, and patterns within a multiple sequence alignment is biologically valuable because it permits visualization of the distribution of a particular feature and inferences about the structure, function, and evolution of the sequences in question. We have therefore created a web server, fingerprint, which combines the characteristics of existing programs that represent identity, variability, charge, hydrophobicity, solvent accessibility, and structure along with new visualizations based on composition, heterogeneity, heterozygosity, d_N/d_S and nucleotide diversity. fingerprint is easy to use and globally accessible through any computer using any major browser. fingerprint is available at http://evol.mcmaster.ca/fingerprint/ .