Traceable Calibration,Performance Metrics,and Uncertainty Estimates of Minirhizotron Digital Imagery for Fine-Root Measurements

Even though fine-root turnover is a highly studied topic, it is often poorly understood as a result of uncertainties inherent in its sampling, e.g., quantifying spatial and temporal variability. While many methods exist to quantify fine-root turnover, use of minirhizotrons has increased over the last two decades, making sensor errors another source of uncertainty. Currently, no standardized methodology exists to test and compare minirhizotron camera capability, imagery, and performance. This paper presents a reproducible, laboratory-based method by which minirhizotron cameras can be tested and validated in a traceable manner. The performance of camera characteristics was identified and test criteria were developed: we quantified the precision of camera location for successive images, estimated the trueness and precision of each camera''s ability to quantify root diameter and root color, and also assessed the influence of heat dissipation introduced by the minirhizotron cameras and electrical components. We report detailed and defensible metrology analyses that examine the performance of two commercially available minirhizotron cameras. These cameras performed differently with regard to the various test criteria and uncertainty analyses. We recommend a defensible metrology approach to quantify the performance of minirhizotron camera characteristics and determine sensor-related measurement uncertainties prior to field use. This approach is also extensible to other digital imagery technologies. In turn, these approaches facilitate a greater understanding of measurement uncertainties (signal-to-noise ratio) inherent in the camera performance and allow such uncertainties to be quantified and mitigated so that estimates of fine-root turnover can be more confidently quantified.     

The distribution and abundance of animal populations in a climate of uncertainty

Current predictions regarding the ecological consequences of climate change on animal populations are generally autecological and species-specific, and/or non-mechanistic extrapolations of recent short-term patterns. To better understand and predict the effects of climate change on the distribution of species and the abundance of populations we offer a novel, broad theoretical framework. Climate-induced changes in trophic structure may actually be more predictable than effects on individual species. The logic is that there are general differences in climatic sensitivity among trophic levels – specifically, that as one moves up trophic levels, there is an increase in the temperature sensitivity of vital rates. More precisely, we provide: (1) a formal mathematical definition of distribution limits that is both operational and conceptual, introducing the concept DL₅₀, defined as the geographic and climatic isoline representing an equilibrium occupancy of half of the suitable habitats; (2) a matrix of the possible changes in trophic structure from climate change and the general theoretical consequences; and (3) a new idea that predicts broad effects of climatic warming on trophic systems. Our intention is to help meet the challenge of developing and testing general theoretical models that can predict which species will be winners and losers in ecological time, which evolutionary traits will be favoured or selected against, and what will be consequences for ecosystem structure and function.     

Silver staining of nucleolar organizer region associated proteins using polyethylene glycol as the protective colloidal developer

Summary A simple modification to the silver staining technique for the demonstration of nucleolar organizer region associated proteins is described. Polyethylene glycol 20 000 is used instead of gelatin as the colloidal developer. This modified technique remains a one stage procedure that is quick and easy to perform. It results in reduced precipitate and less non-specific staining with specimens in which it had been previously difficult to demonstrate these intranuclear silver staining structures.     

Linearization of baculovirus DNA enhances the recovery of recombinant virus expression vectors.

Engineered derivatives of Autographa californica multiple nucleocapsid nuclear polyhedrosis virus (AcMNPV) possessing a unique restriction site provide a source of viral DNA that can be linearized by digestion with a specific endonuclease. Circular or linearized DNA from two such viruses were compared in terms of their infectivity and recombinogenic activities. The linear forms were 15- to 150-fold less infectious than the corresponding circular forms, when transfected into Spodoptera frugiperda cells using the calcium phosphate method. Linear viral DNA was, however, proficient at recombination on co-transfection with an appropriate transfer vector. Up to 30% of the progeny viruses were recombinant, a 10-fold higher fraction of recombinants than was obtained from co-transfections with circular AcMNPV DNA. The isolation of a recombinant baculovirus expression vector from any of the AcMNPV transfer vectors currently in use can thus be facilitated by linearization of the viral DNA at the appropriate location.     

Identification and Aflatoxin Production of Molds Isolated from Country Cured Hams

Of 562 molds isolated from country cured hams, 403 isolates were of the genus Penicillium, 121 were Aspergillus, and 36 were Cladosporium, Alternaria, and other genera.     

Aflatoxin Production in Meats. I. Stored Meats

Aflatoxins were produced on fresh beef (in which bacterial spoilage was delayed with antibiotics), ham, and bacon inoculated with toxinogenic fungi and stored at 15, 20 and 30 C. Meats stored at 10 C were spoiled by bacteria and yeast before detectable levels of aflatoxins were produced. High levels of aflatoxins were formed in meats stored at 20 C; one sample supported the production of 630 mug of aflatoxins per g of meat, the major portion (580 mug) of which was aflatoxin G(1). Meats stored below 30 C developed higher levels of aflatoxin G(1) than B(1), but at 30 C Aspergillus flavus produced equal amounts of B(1) and G(1), whereas A. parasiticus continued to produce more G(1) than B(1).     

Repair of neocarzinostatin-induced deoxyribonucleic acid damage in human lymphoblastoid cells: possible involvement of apurinic/apyrimidinic sites as intermediates

Neocarzinostatin (NCS) induces repair in a xeroderma pigmentosum lymphoblastoid line deficient in the ability to repair DNA damage induced with (acetoxyacetyl-amino)fluorene. Repair was demonstrated by the induction of repair synthesis and by the disappearance of NCS-induced single-strand breaks and/or alkaline-labile sites in DNA. Estimation of NCS-induced repair patch size, based on the density shift induced in DNA by extensive shear after incubation of treated cells in medium with bromodeoxyuridine or by calculation from the extent of restoration of DNA sedimentation profiles in alkaline sucrose gradients and the amount of repair synthesis measured by the BND cellulose method, indicated that only a few nucleotides were inserted per repaired region. NCS-treated bacteriophage T7 DNA requires incubation with alkaline phosphatase to make it a substrate for DNA polymerase I. NCS-reacted T7 DNA, even after phosphatase treatment, is not a substrate for a DNA polymerase alpha obtained from human lymphoma cells. NCS-treated T7 DNA did serve as a substrate for the DNA polymerase alpha when incubated with an apurinic/apyrimidinic (AP) endonuclease with associated 5'-3'-exonuclease activity. The results suggest that NCS-induced AP sites could be intermediates for the in vivo repair synthesis.     

Effects of Powdery Mildew and Water Stress on CO(2) Exchange in Uninfected Leaves of Barley

Net photosynthesis is stimulated in third seedling leaves of barley plants whose lower two leaves are heavily infected by Erysiphe graminis f.sp. hordei Marchal. Stimulation is greater in water-stressed than in well-watered plants. In stressed, but not in well-watered plants, stimulation is associated with the maintenance of high leaf water potential and high leaf conductance. A small part of the changes in net photosynthesis is attributable to changes in respiratory metabolism in the third leaf, and other possible causes are discussed.     

ROSACEA-LIKE DEMODICIDOSIS

Rosacea-like demodicidosis is an entity resembling acne rosacea which is caused by infestation with an abnormally large number of the mite Demodex folliculorum, usually in association with improper cleansing of the face.This condition responds promptly to external treatment consisting of daily cleaning of the face with soap and water and the application of a compound sulfur ointment over a period of a few weeks.Occasional instances of a mixed-type of rosacea are encountered in which internal factors are involved.