Small mammal abundance in relation to microhabitat in a dry sub-humid grassland in Kenya

Six species of rodents and two species of insectivores, live-trapped on a 1 ha grid over a 27 month period, were studied in relation to microhabitat factors in a dry sub-humid grassland in Kenya. Wet season peaks of small mammal species were followed by low numbers trapped during the dry seasons. Species distributions were correlated with different microhabitat parameters, and the separation of species with apparently similar environmental requirements could be explained largely in terms of current knowledge of the biology of the species. Correlation analyses indicated an ecological separation of two closely-related Mus species and of two Crocidura shrews. Overlap indices were extremely high, ranging from 0.556 to 0.877 for all combinations of pairs of species. It seems likely that neither food nor micro-habitat partitioning completely explains the coexistence of the small mammal species and it is suggested that populations are highly transient, moving from refuge areas into temporarily favourable areas during the wet season.     

Age-specific patterns of reproduction in White-tailed and Willow Ptarmigan Lagopus leucurus and L. lagopus

Although many studies report a difference in reproductive success between old and young birds, little is known about how, why and when productivity changes as individuals age. We examined age-dependent reproduction in two bird species that inhabit harsh tundra environments: White-tailed Ptarmigan Lagopus leucurus in alpine areas and Willow Ptarmigan Lagopus lagopus in subarctic Canada. We evaluated reproductive performance in the light of three hypotheses: constraint, restraint and selection. Using cross-sectional and longitudinal data, we observed significant age effects in seven of the eight life history and behavioural traits examined for the two species. However, the pattern of age effects variedconsiderably across life history stages; younger birds generally had smaller clutches, later laying dates and poorer spring body condition, but the nesting success did not vary with age. Brood-rearing and renesting abilities were greater for older parents. The oldest age class of White-tailed Ptarmigan showed reproductive senescence for laying date and clutch size but fledged such a large proportion of the brood that they had the highest overall production of any class. It thus appears that parental experience can compensate for reduced physical ability to produce eggs. Annual mortality rates for breeding females were U-shaped for White-tailed Ptarmigan, with higher rates for young and old birds, but mortality did not change with age in Willow Ptarmigan. Overall, the two species differed in the presence of age dependence for only two traits (renesting ability and annual survival). Age-dependent effects were generally greater for White-tailed Ptarmigan than for Willow Ptarmigan. The patterns of mortality and fecundity we observed in ptarmigan provide general support for the constraint hypothesis of reproductive performance. By examining discrete stages of reproduction, we identified the life history stages where age effects occur and propose proximate mechanisms responsible for these effects.     

Computational Studies of Ligand-Receptor Interactions in Bitter Taste Receptors

Phenylthiocarbamide tastes intensely bitter to some individuals, but others find it completely tasteless. Recently, it was suggested that phenylthiocarbamide elicits bitter taste by interacting with a human G protein-coupled receptor (hTAS2R38) encoded by the PTC gene. The phenylthiocarbamide nontaster trait was linked to three single nucleotide polymorphisms occurring in the PTC gene. Using the crystal structure of bovine rhodopsin as template, we generated the 3D structure of hTAS2R38 bitter taste receptor. We were able to map on the receptor structure the amino acids affected by the genetic polymorphisms and to propose molecular functions for two of them that explained the emergence of the nontaster trait. We used molecular docking simulations to find that phenylthiocarbamide exhibited a higher affinity for the target receptor than the structurally similar molecule 6-n-propylthiouracil, in line with recent experimental studies. A 3D model was constructed for the hTAS2R16 bitter taste receptor as well, by applying the same protocol. We found that the recently published experimental ligand binding affinity data for this receptor correlated well with the binding scores obtained from our molecular docking calculations.     

European checkerspots (Melitaeini: Lepidoptera,Nymphalidae) are not aposematic – the point of view of great tits (Parus major)

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Involvement of auxin pathways in modulating root architecture during beneficial plant–microorganism interactions

A wide variety of microorganisms known to produce auxin and auxin precursors form beneficial relationships with plants and alter host root development. Moreover, other signals produced by microorganisms affect auxin pathways in host plants. However, the precise role of auxin and auxin‐signalling pathways in modulating plant–microbe interactions is unknown. Dissecting out the auxin synthesis, transport and signalling pathways resulting in the characteristic molecular, physiological and developmental response in plants will further illuminate upon how these intriguing inter‐species interactions of environmental, ecological and economic significance occur. The present review seeks to survey and summarize the scattered evidence in support of known host root modifications brought about by beneficial microorganisms and implicate the role of auxin synthesis, transport and signal transduction in modulating beneficial effects in plants. Finally, through a synthesis of the current body of work, we present outstanding challenges and potential future research directions on studies related to auxin signalling in plant–microbe interactions.     

Temporal persistence and spatial distribution of an American inoculant strain of the ectomycorrhizal basidiomycete Laccaria bicolor in a French forest plantation

Selected strains of ectomycorrhizal fungi, such as the basidiomycete Laccaria bicolor , are currently being used as inoculants in nurseries to improve growth of forest trees after outplanting. Information is needed on the survival of these introduced strains in forests and their impact on indigenous biodiversity. Dissemination and persistence of an American strain, L. bicolor S238N, were studied 10 years after outplanting in a Douglas fir plantation located at Saint-Brisson (Morvan, France). About 430 Laccaria spp. sporophores were collected over 3 years. Inheritance of nuclear ribosomal DNA, as well as RAPD markers, was characterized in L. bicolor S238N, using a haploid progeny set of 91 monokaryons. More than 50 markers were identified (19 heterozygous and 33 homozygous or cytoplasmic markers), which unambiguously confirmed that the introduced strain was still present in the inoculated plots. Neither selfing ( P < 0.0008) nor introgression with indigenous strains was detected although in vitro interfertility between the American strain and indigenous L. bicolor was identified. No ingress of the introduced genet into adjacent uninoculated plots colonized by various local Laccaria genets was detected. It is proposed that the spatial distributions identified have developed through mycelial propagation of the introduced strain and intraspecific competition with native genets. Although longer-term data is still lacking, the stability of the inoculant strain and the limited disturbance to indigenous populations described support large-scale nursery production of this host-fungal combination.     

The production‐ecological sustainability of cassava,sugarcane and sweet sorghum cultivation for bioethanol in Mozambique

We present an approach for providing quantitative insight into the production‐ecological sustainability of biofuel feedstock production systems. The approach is based on a simple crop‐soil model and was used for assessing feedstock from current and improved production systems of cassava for bioethanol. Assessments were performed for a study area in Mozambique, a country considered promising for biomass production. Our focus is on the potential role of smallholders in the production of feedstock for biofuels. We take cassava as the crop for this purpose and compare it with feedstock production on plantations using sugarcane, sweet sorghum and cassava as benchmarks. Production‐ecological sustainability was defined by seven indicators related to resource‐use efficiency, soil quality, net energy production and greenhouse gas (GHG) emissions. Results indicate that of the assessed systems, sugarcane performed better than cassava, although it requires substantial water for irrigation. Targeted use of nutrient inputs improved sustainability of smallholder cassava. Cassava production systems on more fertile soils were more sustainable than those on less fertile soils; the latter required more external inputs for achieving the same output, affecting most indicators negatively and reducing the feasibility for smallholders. Cassava and sweet sorghum performed similarly. Cassava production requires much more labour per hectare than production of sugarcane or sweet sorghum. Production of bioethanol feedstock on cultivated lands was more sustainable and had potential for carbon sequestration, avoiding GHG emissions from clearing natural vegetation if new land is opened.     

Characterization of Plant Epidermal Lens Effects by a Surface Replica Technique

Optical replicas of leaf surfaces were made for characterizingthe lens properties of individual epidermal cells. Using a dentallatex, moulds were made of leaf surfaces and subsequently usedto produce agarose replicas. The replicas focused light in amanner similar to intact epidermal cells and it was possibleto measure both focal lengths and intensifications within leafreplicas of Thermopsis montana, Mahonia repens, and Smilacinastellata which had epidermal cells of different diameter. Focallengths ranged from 74—130 µm which indicated thatlight was concentrated within the underlying photosynthetictissues of these leaves. Focal intensifications were measuredsensiometrically and were 1.5 for T. montana and 2-6 for theother species. These values compare favourably with calculatedfocal lengths and measurements taken from isolated epidermallayers. The results indicate that the epidermis can concentratelight within the leaf to amounts well in excess of ambient light.Furthermore, the replicas faithfully reproduced fine anatomicaldetails from a wide variety of leaves and they provide a non-destructiveway to reproduce surface characteristics for anatomical andphysiological studies.