Molecular phylogeny of New World sheath-tailed bats (Emballonuridae: Diclidurini) based on loci from the four genetic transmission systems in mammals

Multiple unlinked loci are surveyed in a methodological approach for mammalian systematics that uses genes from the four pathways of genetic transmission: mitochondrial, autosomal, and X and Y sex chromosomes. Each of these components has different properties, such as effective population size, mutation rate, and recombination, that result in a robust hypothesis of evolutionary history. The utility of this experimental design is tested with bats in the family Emballonuridae and the hypothesis that the New World taxa are monophyletic. Parsimony and Bayesian analyses of the individual data sets give generally congruent topologies with high bootstrap proportions and posterior probabilities for monophyletic clades representing species and genera. The mitochondrial gene has significantly faster rates of substitution, higher levels of homoplasy, and a greater degree of saturation than the nuclear genes that contributed to the loss of phylogenetic signal at deeper branches of the tree. However, there is better resolution and support for the more slowly evolving nuclear introns including a New World clade, indicating a single origin of emballonurid bats in the Neotropics (tribe Diclidurini). One novel subtribe has a hard basal polytomy that is unresolved for all of the nuclear partitions, suggesting a rapid burst of evolution during the diversification of genera.  © 2008 The Linnean Society of London, Biological Journal of the Linnean Society , 2008, 93 , 189–209.     

A new genus of monstrilloid copepods (Crustacea) with anteriorly pointing ovigerous spines and related adaptations for subthoracic brooding

Maemonstrilla gen. nov. , known exclusively from females, is proposed for Monstrilla longipes A. Scott, 1909, M. turgida A. Scott, 1909, and five new species from coral reef plankton in the Ryukyu Islands, Japan: Maemonstrilla hyottoko sp. nov. (type species), M. polka sp. nov. , M. spinicoxa sp. nov. , M. simplex sp. nov. and M. okame sp. nov. A syntype of M. turgida was examined, but the holotype of M. longipes is lost; the latter species, being similar to several of the new species, is regarded as unidentifiable, and the identity of specimens assigned to it by several authors is put in doubt. Until now, all known female monstrilloids have had posteriorly trailing ovigerous spines, but in Maemonstrilla gen. nov. these spines point anteriorly and hold the egg mass between the legs beneath the thorax. This is the first known instance of subthoracic brooding in a planktonic copepod; its functional significance is discussed, and brooding habits of non‐planktonic copepods are briefly reviewed. The intercoxal sclerites of legs 1–4 in Maemonstrilla gen. nov. are very wide, making room for the eggs. In all species except M. turgida comb. nov. , the inner seta of the proximal segment of each leg ramus is either absent or reduced to a nub; this may lessen interference of the egg mass with leg movement. All species have a uniramous leg 5 with two setae, except M. turgida comb. nov. (biramous with setae on both rami); M. turgida comb. nov. is evidently the sister‐group of its congeners, each sister‐group in the genus being defined by additional autapomorphies. Scanning electron micrographs of all the Ryukyuan species except M. simplex sp. nov. are provided; these constitute a preliminary survey of monstrilloid integumental organs and cuticular ornamentation. Among the unusual features are two lobes at the base of the coxa in legs 1–4 of M. polka sp. nov. and M. spinicoxa sp. nov. and two pairs of posterodorsal spine‐like scales on the first and second free pedigers of M. turgida comb. nov. Newly hatched nauplii of M. okame sp. nov. , examined by scanning electron microscopy, are generally similar to those of Monstrilla hamatapex Grygier & Ohtsuka, 1995, but with a different mandibular structure in which the distal hook and seta clearly represent the endopod, not enditic armament of the basis. © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society, 2008, 152 , 459–506.     

New Streptocarpus species (Gesneriaceae) from South Africa

Two new rosulate species of Streptocarpus are described from the eastern seaboard of South Africa. The first is endemic to Mpumalanga Province. This species has almost actinomorphic corollas with small cylindrical tubes and was previously included within Streptocarpus parviflorus. However, molecular and morphological data and habitat preference do not support this classification. The second species is from the Msikaba River Gorge in the Eastern Cape Province. It adds to the already impressive list of endemic plant species from this region and is allied to other rosulate species of the Eastern Cape. It approaches Streptocarpus rexii in flower size but differs in its much shorter corolla tubes, which lack purple nectar guides. In addition, the corolla floors are marked with yellow bars reminiscent of Streptocarpus cyaneus and also seen in sympatric populations of the small‐flowered Streptocarpus modestus. © 2008 The Linnean Society of London, Botanical Journal of the Linnean Society, 2008, 158 , 743–748.     

Patterns of molecular diversity in wild stocks of the redclaw crayfish (Cherax quadricarinatus) from northern Australia and Papua New Guinea: impacts of Plio-Pleistocene landscape evolution

1. Analysis of mitochondrial and nuclear DNA (microsatellites) in 379 individuals, collected from 15 localities in northern Australia and Papua New Guinea (PNG), demonstrated that wild redclaw crayfish ( Cherax quadricarinatus ) populations consist of two highly divergent Australian lineages and two PNG lineages.
2. The disjunction between the two Australian lineages occurs over a distance of approximately 200 km in the south-western corner of the Gulf of Carpenteria. These data conflict with an earlier study that detected no significant differentiation in 23 variable allozyme loci in redclaw sampled from northern Australia, but concur broadly with the previous recognition of two morphologically distinct species ( C. quadricarinatus and C. bicarinatus ) across northern Australia, and a third species in PNG ( C. albertsii ).
3. The inferred timing and patterns of divergence evident in the molecular data presented here closely align with a similar pattern reported in a co-distributed freshwater decapod crustacean, and broadly reflect patterns in some vertebrate taxa with similar distributions across northern Australia and PNG.
4. These congruent patterns most probably reflect periodic Plio-Pleistocene land and freshwater connections between Australia and New Guinea.     

Seed caching by woylies Bettongia penicillata can increase sandalwood Santalum spicatum regeneration in Western Australia

Abstract The role a small marsupial, the woylie Bettongia penicillata, might play in the recruitment and regeneration of Western Australian sandalwood Santalum spicatum through its seed caching behaviour was investigated in this study. To determine the fate of the seeds, cotton thread was attached to the seeds and the trail followed. A total of 25 seed caches were located. All of the seeds were found in separate caches, which was consistent with scatter‐hoarding behaviour. The average distance from the source of the seeds to the cache was 43.1 m ± 5.8 m at Dryandra woodland and 29.1 m ± 3.8 m at Karakamia sanctuary. The mean cache depth was 4.3 cm ± 0.2 cm at Dryandra woodland compared with 4.6 cm ± 0.3 cm at Karakamia sanctuary. Significantly more seedlings and saplings grew away from sandalwood trees at sites where woylies were present than at sites with no woylies. In contrast, significantly more seedlings and saplings grew under adult sandalwood trees at the site without woylies than where they were present, although there were significantly lower rates of recruitment and sandalwood regeneration at these sites. In addition, significantly more whole, undisturbed sandalwood seeds were found under the parent trees at the woylie‐free site than at the site with woylies. These findings strongly suggest that little seed dispersal or regeneration of sandalwood occurs in the absence of woylies. Through scatter‐hoarding, woylies have the potential to disperse and cache sandalwood seeds away from the source and significantly alter the subsequent regeneration of sandalwood. Furthermore, by caching seeds large distances away from a source, woylies could modify the distribution of sandalwood in an area.     

Floristic richness of three perhumid New Zealand alpine plant communities in comparison with other regions

Abstract Results are presented on vascular species richness in three representative alpine plant communities at 1040–1410 m on Mt Burns in the perhumid Fiordland region, a hotspot of alpine plant diversity, in south‐western South Island, New Zealand. Overall species richness was not dissimilar between the three communities in any of the eight plot sizes (mean values of 20.8–24.4 species in the largest plots of 100 m²), even though coefficients of floristic similarity were small (17.9; 23.5) between both low‐alpine communities (snow tussock‐shrubland and snow tussock grassland) and the high‐alpine cushion fellfield. Vascular species richness was generally similar to that in the few other oceanic New Zealand alpine communities for which data are available. The decline in richness from the low‐alpine to high‐alpine zones, revealed in more comprehensive records from two other regions with generally similar oceanic environments, was not recorded, indeed was reversed, on Mt Burns. Whether the recognized biodiversity hotspot of Fiordland has a generally richer high‐alpine flora than other regions in New Zealand needs further examination. The general pattern of alpine floristic richness in relation to elevation, in New Zealand, also prevails in most alpine regions abroad, usually under much more extreme continental environments. This pattern is usually ascribed to the associated decrease in temperature. Both the small size of the land mass and/or associated environmental conditions may be implicated but clarification awaits further data, preferably collected with standardized procedures.     

The effects of habitat structure on predation risk of birds in agricultural landscapes

It has been suggested that increased predation rates may rival habitat alteration as a causal agent in farmland bird population declines. Such a view may be over-simplistic, however, as changes in habitat structure may influence habitat selection and foraging efficiency through their influence on perceived and actual predation risk. We review evidence from the literature on the effects of habitat structure on predation risk of foraging and nesting birds and apply these principles to investigate the likely effects on the 20 species that comprise the UK Government's 'Farmland Bird Index'. Shorter vegetation is likely to enhance foraging efficiency and reduce predation risk (when ground foraging) for 15 of the 20 species. However, within grassland systems longer vegetation is known to enhance food supplies (e.g. Tipulid larvae and voles) of several farmland bird species and so mosaics of short and long vegetation may provide the optimum conditions for most species (e.g. Lapwing Vanellus vanellus , Starling Sturnus vulgaris , Barn Owl Tyto alba ). Agricultural intensification has encouraged uniform dense swards, thus reducing habitat diversity, and agri-environment schemes that provide heterogeneous sward structure may thus facilitate farmland bird conservation. Intensification has also resulted in less dense hedgerows; although a reversal of this trend may improve foraging efficiency for many species, it may be detrimental to a smaller number of species that prefer shorter, less dense hedges for nesting. Before these tentative conclusions can be confirmed, more research is required that considers how the effects of habitat structure on individuals is likely to translate into population-level impacts.     

A functional morphospace for the skull of labrid fishes: patterns of diversity in a complex biomechanical system

The Labridae (including wrasses, the Odacidae and the Scaridae) is a species‐rich group of perciform fishes whose members are prominent inhabitants of warm‐temperate and tropical reefs worldwide. We analyse functionally relevant morphometrics for the feeding apparatus of 130 labrid species found on the Great Barrier Reef and use these data to explore the morphological and mechanical basis of trophic diversity found in this assemblage. Morphological measurements were made that characterize the functional and mechanical properties of the oral jaws that are used in prey capture and handling, the hyoid apparatus that is used in expanding the buccal cavity during suction feeding, and the pharyngeal jaw apparatus that is used in breaking through the defences of shelled prey, winnowing edible matter from sand and other debris, and pulverizing the algae, detritus and rock mixture eaten by scarids (parrotfishes). A Principal Components Analysis on the correlation matrix of a reduced set of ten variables revealed complete separation of scarids from wrasses on the basis of the former having a small mouth with limited jaw protrusion, high mechanical advantage in jaw closing, and a small sternohyoideus muscle and high kinematic transmission in the hyoid four‐bar linkage. Some scarids also exhibit a novel four‐bar linkage conformation in the oral jaw apparatus. Within wrasses a striking lack of strong associations was found among the mechanical elements of the feeding apparatus. These weak associations resulted in a highly diverse system in which functional properties occur in many different combinations and reflect variation in feeding ecology. Among putatively monophyletic groups of labrids, the cheilines showed the highest functional diversity and scarids were moderately diverse, in spite of their reputation for being trophically monomorphic and specialized. We hypothesize that the functional and ecological diversity of labrids is due in part to a history of decoupled evolution of major components of the feeding system (i.e. oral jaws, hyoid and pharyngeal jaw apparatus) as well as among the muscular and skeletal elements of each component. © 2004 The Linnean Society of London, Biological Journal of the Linnean Society, 2004, 82 , 1–25.     

Correlates of extinction risk of birds from two Indonesian islands

Size of distributional range, position in the range, body size and diet are some of the ecological traits that may correlate with local abundance. Evolutionary phenomena such as taxon cycles, acting over much greater time periods, may also influence abundance and promote species extinction. This paper assesses which of a wide range of ecological and historic traits best predict the variation in abundance of tropical forest birds on Sumba and Buru islands in Wallacea (Indonesia). In addition we seek to determine which traits predict species' ability to adapt to secondary or logged forest. The most important correlates of both abundance and ability to transfer were those related to the evolutionary history of the species within the Wallacean Archipelago and not the traits that were more directly related to species ecology. These relationships are maintained when allowance is made for phylogenetic relationships. Our interpretation of the results is that recent colonists to an island are initially rare in the indigenous forest habitat but concomitant with an adaptation to local conditions they gradually become more abundant and taxonomically distinct from other populations of the same species. These results apparently contradict the taxon cycle hypothesis but this may be a result of our focus on indigenous forest habitats rather than on a wider range dominated by anthropogenic ones.