Complex NAPL Site Characterization Using Fluorescence Part 2: Analysis of Soil Matrix Effects on the Excitation/Emission Matrix

Commercially available cone penetrometer (CPT)fluorescence based sensor platforms have been used to detect non-aqueous phase liquids (NAPLs), such as petroleum oils and lubricants, in situf or more than a decade. These approaches have also been used to detect dense non-aqueous phase liquid (DNAPL) source zones by detecting commingled oilsfuels, and naturally occurring organic materials entrained by DNAPLs and carried to depths below the water table. Several neat NAPLs and mixtureswere added to various soil types and analyzedfor specific fluorescence characteristics to determine the optimal excitation source for site characterization efforts. Using excitationlemission matrices (EEMs), we demonstrate that an optimized excitation wavelength can be determinedfor specific fiuowphores within the NAPL mixtures, and that available systems can be ranked based on the specific contaminant and site soil types. An optimal excitation wavelength yields the maximum fluorescence within an EEM spectrum. We ranked commercially available cone penetrometer fluorescence detection systems according to the potential for ease of detection based on maximum fluorescence response. When soils were added tocomplexNAPLmixtures,analytefluorescence emissionwasattenuatedinpreferential portions of the EEM, leading to differences in the optimal excitation source wavelength. Furthermore, impure silica-containing minerals impact the emission signal, potentially leading to incorrect conclusionsf or several commercially available systems. Our find ings suggest that afrequency-agile (e.g., tunable excitation source) probe system would be superior to any other system commercially available, provided the system would be relatively easy to operate and would have rapid in-situ EEM generating capabilitiesfo r optimization in the field.     

Energy expenditure, body-weight and foraging performance of Storm Petrels Hydrobates pelagicus breeding in artificial nesting chambers

Many avian species, such as Storm Petrels Hydrobates pelagicus, are intolerant of disturbance at the nest, which complicates the collection of data relating to metabolic rate and the use of body reserves during incubation. I describe the design of an artificial nest chamber, which is simple and inexpensive to construct and facilitates the collection of such data. Eighty-one nest chambers situated in a large colony of breeding Storm Petrels had high occupancy rates (29/81 in each of 2 years), and the breeding success of birds nesting in boxes was similar to that of pairs nesting in natural crevices. Direct measurement of carbon dioxide production using standard respirometry techniques and estimations of metabolic rate based on the rates of mass loss during incubation indicated close agreement between the two methods of estimating energy consumption. Assuming the metabolic requirements during incubation are furnished entirely from stomach oil, 76% of the daily mass lost represented stomach oil catabolism. The duration of incubation shifts was unrelated to the body mass, and presumably to body reserves, of Storm Petrels on arrival at the nest. Shifts were usually terminated by the return of the foraging partner. The body mass of birds returning from foraging was relatively constant and was unrelated to the amount of time spent foraging at sea, indicating that the decision rule to return from foraging was the acquisition of a threshold level of body mass (about 31 g). There was a negative relationship between the duration of foraging trips and the body mass of Storm Petrels at departure from the nest and a positive relationship between trip duration and the net mass gain at sea. The use of nestboxes based on the design described here would have a wide variety of applications in facilitating data collection for many cavity-or burrow-nesting species which are sensitive to disturbance.     

Fine-Scale Habitat Associations of Red-Backed Voles in Boreal Mixedwood Stands

Abstract: To provide habitat for late-successional wildlife species, new ecosystem-based forest management practices aim to retain elements of complex stand structure, including live residual trees, dead wood legacies, and advanced regeneration, within managed stands. Predicting the effectiveness of these strategies is a challenge for species whose habitat relationships may involve multiple factors and can vary among sites. For 2 years, we live-trapped a common, late-successional microtine rodent, the southern red-backed vole (Myodes [formerly Clethrionomys] gapperi), in 40 1.4-ha boreal mixedwood sites in Ontario, Canada. Using a neighborhood-scale modeling approach, we related red-backed vole capture locations to spatially referenced measures of overstory trees, shrubs and saplings, downed woody debris (DWD), and forest floor substrate. We further assessed how associations with these features varied with availability of the features within a site and as a function of stand management history. In spring, red-backed voles were associated with trap stations that had, within a 26-m radius, a dense shrub layer, abundant late-decay DWD, coniferous understory and litter, and possibly, understory vegetation associated with moist conditions. Positive associations with shrub cover, late-decay DWD, and a moisture-associated understory were most apparent in sites in which these elements were scarce (e.g., <1,500 stems/ha of hardwood saplings and short shrubs; <0.8% projected ground cover of late-decay DWD). The importance of late-decay DWD; shade-tolerant, coniferous understory composition; and substrate varied depending on a site's management history, with each feature having a strong positive effect in 47–64-year-old stands that were harvested using horse skidding and weaker effects in both 31–40-year-old stands that were clearcut with mechanical skidding and >80-year-old fire-origin stands. Our models of fine-scale habitat relationships for red-backed voles may be useful in establishing structural retention guidelines suitable for wildlife species dependent on late-successional habitat structure. In this regard, retaining abundant DWD and 10–30% live trees at harvest may be effective management strategies for providing favorable habitat conditions at localized scales.     

Satellite Telemetry in Avian Research and Management: Sample Size Considerations

Abstract: Satellite tracking is currently used to make inferences to avian populations. Cost of transmitters and logistical challenges of working with some species can limit sample size and strength of inferences. Therefore, careful study design including consideration of sample size is important. We used simulations to examine how sample size, population size, and population variance affected probability of making reliable inferences from a sample and the precision of estimates of population parameters. For populations of >100 individuals, a sample >20 birds was needed to make reliable inferences about questions with simple outcomes (i.e., 2 possible outcomes). Sample size demands increased rapidly for more complex problems. For example, in a problem with 3 outcomes, a sample of >75 individuals will be needed for proper inference to the population. Combining data from satellite telemetry studies with data from surveys or other types of sampling may improve inference strength.     

Higher gregarine parasitism often in sibling species of host damselflies with smaller geographical distributions

1. This study investigated inter‐specific variation in parasitism by gregarines (Eugregarinorida: Actinocephalidae), among sibling species of damselflies (Odonata: Zygoptera), in relation to relative size of geographical ranges of host species. 2. Gregarines are considered generalist parasites, particularly for taxonomically related host species collected at the same sites or area. Prevalence and median intensity of gregarine parasitism was obtained for 1338 adult damselflies, representing 14 species (7 sibling species pairs) across 3 families within the suborder Zygoptera. Damselflies were collected at three local sites in Southeastern Ontario, during the same periods over the season. 3. Five out of seven species pairs had significant differences in parasitism between sibling species. The less widespread host species was the more parasitised for three species pairs with significant differences in gregarine prevalence, and for two species pairs with differences in median intensity. The more widespread host had a higher intensity of infection as expected, in two species pairs. 4. Future studies on ecological determinants of parasitism among related species should examine robust measures of abundance of species and representation of species regionally.     

Western Snowy Plovers Charadrius alexandrinus nivosus select nesting substrates that enhance egg crypsis and improve nest survival

Predation is an important cause of nest failure for many birds and has shaped the life‐history characteristics of many species, especially ground‐nesting shorebirds. We examined nesting success, causes of clutch failure and nest survival in relation to variation in substrate characteristics in a colour‐marked population of Western Snowy Plovers Charadrius alexandrinus nivosus breeding on riverine gravel bars in coastal northern California. Plovers experienced higher nesting success on gravel bars than on nearby beaches, which were characterized by more homogeneous, sandy substrates. On gravel bars, Plovers nested in habitats characterized by large, heterogeneous substrates, with more egg‐sized stones, compared with random sites. Egg crypsis, as indexed by time required of a naïve observer to detect a nest, increased with number of egg‐sized substrates. Nest survival correlated negatively with heterogeneity of substrates and positively with the number of egg‐sized stones. Consistently high nesting success of Plovers on gravel bars indicates that this high‐quality habitat deserves special management considerations given the species’ threatened status.     

Characterization and Cloning of Pneumocystis carinii Nucleic Acid

Large numbers of Pneumocystis carinii (2 × 10¹⁰ nuclei) were isolated and separated from the lungs of immunosupprcsscd rats by an enzymaric (collagcnasc, hyaluronidasc and DN'asc) digestion procedure. The nucleic acid isolated from this P. cartnii-cnnchcd preparation was characterized by melting point analysis and RNA-sizing gels. The GC content of P. carinii DNA was approximately 33% while the rat DNA was 41.4%. In addition, RNA isolated from the P. curmii-enrichcd preparation showed unique ribosomal RNA bands of 3.4 kb and 1.8 kb as compared with uninfected rat lung ribosoma! RNA. which banded at 4.8 and 1.9 kb. Following isolation and fragmentation by sonicaüon, the P. carinii D.VA fragments were inserted into the vector, λ gt-11. The resultant library contained 1.1 × 10⁵ phage, of which 40–45% hybridized to P. carinii DNA but not to rat DNA.     

Aquatic prey switching and urban foraging by the White Ibis Eudocimus albus are determined by wetland hydrological conditions

Prey availability is known to limit reproduction of some species of nesting birds, but identifying the primary prey types of a species with a flexible diet can be challenging. For the White Ibis Eudocimus albus, a tactile feeding, medium‐sized wading bird, nestling prey composition is suggested to depend on landscape water depths/availability of foraging habitat at the time of nesting and on historical drying events affecting prey production. We collected and compared inter‐ and intra‐annual diet variation of White Ibis chicks reared in the Everglades over two years that were independently identified as being relatively good (2006) and poor (2007) nesting seasons. We collected 127 nestling boluses and analysed the temporal variation in biomass of eight functional prey groups using multivariate techniques. The boluses from 2006 in the central Everglades were dominated by fish, but in 2007, after fish had been reduced by the previous year of drying, the boluses from the same region were more variable and dominated by garbage (i.e. scavenging). Analysis of five different collections taken from a different colony in the northern Everglades indicated that boluses were characterized by crayfish and had fewer fish or less garbage when landscape water depths were relatively higher and more preferred habitat was available. At lower landscape water depths in 2007 the bolus composition shifted away from crayfish towards small fish and urban food (terrestrial insects and garbage). Our results support the suggestion of depth‐dependent diets; prey composition depends on the current landscape water levels around the colonies, and also suggests that previous drying events can lead to increased reliance on alternative food sources. White Ibis partially compensated for unavailable aquatic prey with alternative urban foods, but their nesting success appears to have suffered.