Adverse Effects of Capture and Handling Little Bustard

Abstract Capturing wild animals for research or conservation purposes may cause some adverse effects, which is only acceptable if these are outweighed by conservation benefits. We used information from 3 on-going telemetry studies on the endangered little bustard (Tetrax tetrax) in Western Europe to evaluate the risk factors associated with capture and handling. Of 151 telemetered birds, 23 (15.2%) exhibited impaired mobility and coordination after release, probably related to the occurrence of capture myopathy. Among the 23 impaired birds, 10 (43.5%) died before recovering normal mobility (6.6% of all birds captured). Logistic regression analyses identified longer handling time, longer restraint time, use of cannon nets, and capture of juveniles as inducing factors for these disorders. We conclude that little bustard is fairly susceptible to suffering ataxia and paresia after release as a result of restraint associated with capture and manipulation. Researchers can reduce this risk by keeping handling and restraint time below 10–20 minutes, particularly when using cannon nets or when capturing juveniles.     

Revision of the genus Pseudabris Fairmaire (Coleoptera,Meloidae), an endemic to the Tibetan Plateau,with biogeographical comments

The mylabrine genus Pseudabris is endemic to the Tibetan Plateau and includes seven species with overlapping or disjunct ranges. The genus is revised: three new species, P. brevipilosa sp.n., P. latimaculata sp.n., P. regularis sp.n., are described and illustrated, and a key to the species is provided. Molecular evidence supports the placement of Pseudabris within the tribe Mylabrini. Results of a morphology‐based cladistic analysis support the existence of two lineages, one centred mainly on the south central plateau, and the second in the eastern area. Faunistics and bionomics of the genus are summarized, focusing on phenology, elevation, habitat preference and host plants. The endemism of the Tibetan Plateau is discussed, with a special focus on the genus Pseudabris.     

Relationships of the haematophagous marine snail Colubraria (Rachiglossa: Colubrariidae), within the neogastropod phylogenetic framework

The gastropod genus Colubraria includes marine shallow‐water species from tropical, subtropical, and temperate rocky coral environments. At least six species are known to feed on fish blood. Although there is general consensus in placing Colubraria in the Neogastropoda, the actual relationships and the systematic position of Colubraria and related genera are unknown. This is partly the consequence of the lack of a clear phylogenetic framework for the Neogastropoda. This study attempts to propose a phylogenetic framework for the Neogastropoda, by testing: (1) a preliminary phylogenetic arrangement for a large number of recognized neogastropod families; (2) the position of Colubraria within the neogastropods; and (3) the relationships of Colubraria within one of the major neogastropod lineages. We used two different molecular data sets. The first set included representatives of at least 14 neogastropod families, for points (1) and (2), and was based on mitochondrial (16S, 12S, and cytochrome oxidase subunit I, COI) and nuclear (28S) DNA sequences, giving a total of 3443 aligned positions. The second data set, for point (3), included 30 buccinoid sequences from mitochondrial 16S, giving a total of 1029 aligned positions. We also studied the anatomy of the type species of Colubraria and compared it with other neogastropods within the new phylogenetic framework. The results included the first phylogeny of the neogastropod based on 50% of the recognized families. This clearly indicated that the nematoglossan Cancellariidae represent a basal offshoot of the monophyletic Neogastropoda, and that the toxoglossan Conoidea are the sister group to the Rachiglossa. Within the Rachiglossa, a colubrariid clade, worthy of family ranking, showed clear buccinoid affinities. Most of the anatomy of Colubraria is congruent with a buccinoid model. The peculiar anatomical features that do not conform to the buccinoid model seem to be related to the evolution of haematophagous feeding. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2010, 158 , 779–800.     

The systematics of the radula-less gastropod Clathromangelia (Caenogastropoda, Conoidea)

On the basis of foregut anatomy and embryonic/larval shell morphology, the radula-less conoidean gastropod genus Clathromangelia Monterosato, 1884 is transferred to the subfamily Daphnellinae (family Turridae). The Lower Pliocene to Recent species arc reviewed. The type species is Pleurotoma granum Philippi, 1844, Recent from Sicily. C. quadrillum Dujardin, 1837 a fossil species described from the Miocene (and ranging to the Lower Pliocene) is here considered a distinct species, with planktotrophic larval development. Clathromangelia strigillata Pallary, 1904 from the Gulf of Gabè (Tunisia) is figured and redescribed. Clathromangelia loiselieri Oberling, 1970 (lectotype here selected) is a senior synonym of C. fehrae (emend. pro C. fehri ) Aartsen & Zenetou, 1987. Three new species are described and figured from the Italian Pliocene: C. tavianii sp. n., C. elvirae sp. n. and C. marinae sp. n.     

Testing for tree-ring divergence in the European Alps

Evidence for reduced sensitivity of tree growth to temperature has been reported from multiple forests along the high northern latitudes. This alleged circumpolar phenomenon described the apparent inability of temperature-sensitive tree-ring width and density chronologies to parallel increasing instrumental temperature measurements since the mid-20th century. In addition to such low-frequency trend offset, the inability of formerly temperature-sensitive tree growth to reflect high-frequency temperature signals in a warming world is indicated at some boreal sites, mainly in Alaska, the Yukon and Siberia. Here, we refer to both of these findings as the ‘divergence problem’ (DP), with their causes and scale being debated. If DP is widespread and the result of climatic forcing, the overall reliability of tree-ring-based temperature reconstructions should be questioned. Testing for DP benefits from well-replicated tree-ring and instrumental data spanning from the 19th to the 21st century. Here, we present a network of 124 larch and spruce sites across the European Alpine arc. Tree-ring width chronologies from 40 larch and 24 spruce sites were selected based on their correlation with early (1864–1933) instrumental temperatures to assess their ability of tracking recent (1934–2003) temperature variations. After the tree-ring series of both species were detrended in a manner that allows low-frequency variations to be preserved and scaled against summer temperatures, no unusual late 20th century DP is found. Independent tree-ring width and density evidence for unprecedented late 20th century temperatures with respect to the past millennium further reinforces our results.     

A molecular phylogeny of the cosmopolitan hyperdiverse genus Hydraena Kugelann (Coleoptera,Hydraenidae)

With almost 900 described species, Hydraena Kugelann (Hydraenidae) is one of the largest genera among Coleoptera. The subgeneric classification of Hydraena has been controversial, with 11 subgeneric names having so far been attributed to it. Some of these, Haenydra Rey and Spanglerina Perkins, have been treated as valid genera, as subgenera or as species groups. The most recent complete treatment of the genus, based on a cladistic analysis of morphological characters, recognized two major lineages, and only these were classified as subgenera: Hydraenopsis (mainly Gondwanan distribution), and Hydraena s.str. (mainly Laurasian). Here, we reconstruct the phylogeny of Hydraena using 212 species plus several outgroups and approximately 4 kb of sequence data from two nuclear (SSU and LSU) and four mitochondrial genes (cox1, rrnL, trnL and nad1). Data were aligned with two different strategies of multiple alignment (implemented in mafft and prank ), and the phylogenies reconstructed using maximum likelihood and Bayesian methods. We estimated approximate ages of the main nodes using a relaxed molecular clock with Bayesian methods, and an a priori evolutionary rate of 0.01 substitutions/site/million years (Ma) plus a calibration point based on a biogeographical split. We found strong support for the monophyly of Hydraena and many of the clades recognized with morphological data. The following clades are considered as subgenera: Phothydraena Kuwert, Spanglerina Perkins, Holcohydraena Kuwert, Hydraenopsis Janssens and Hydraena s.str. The placement of three species groups, two Neotropical (H. multispina group, H. paeminosa group) and one South African/Madagascan (H. monikae group), is uncertain, and they are considered incertae sedis within Hydraena. The origin of the genus was estimated to be in the Lower Eocene, with many species complexes diversifying in the Pleistocene. Dispersal events seem to have played a key role in order to determine the current distribution of the species groups in the southern hemisphere (mainly in Hydraenopsis).     

An optimized protocol for the identification of diatoms,flagellated algae and pathogenic protozoa with phylochips

In the past decade, molecular probe‐based methods have proved successful in improving both the efficiency and accuracy of the identification of microorganisms, especially those that are devoid of distinct morphological features. However until recently, these methods had the major drawback of being limited to the identification of only one or just a few species at a time. With the use of DNA microarrays, it is possible to identify large numbers of taxa on a single‐glass slide, the so‐called phylochip. There are numerous microarray protocols in the literature. These protocols share the same principles, but vary in details, e.g. labelling approach or detergent concentration in the washing buffer. In this study, we show that even small variations in hybridization protocols can have a strong impact on the outcome of the microarray hybridization. An optimized protocol for species identification on phylochips is presented. The optimized protocol is the result of a joined effort of three laboratories to develop phylochips for microbial species identification.     

Adaptive significance of food income in European snakes: body size is related to prey energetics

Feeding strategies and diet patterns have been extensively investigated in vertebrates and, more specifically, in snakes. Although it has been hypothesized that prey species may differ in terms of energy content, almost no theoretical or practical study has been carried out to determine actual nutritional values of the common prey types of wild snakes. Our model taxa were a selection of widely distributed and well known European snake species, which have all been studied in depth: approximately 76% of their diet is composed of mammals, reptiles, and insects. We therefore selected a single model species for each of these categories and proceeded with the analyses. Nutritional values were determined using a standard procedure: lizards and mice were richer in proteins than insects (crickets); insects and mice were richer in lipids than lizards, and mice and crickets have a higher energy content than lizards; lizards were rich in ashes. We then applied our experimental results to a selected sample of European terrestrial snakes (11 populations, ten species, seven genera, two families) characterized by different body size (50–160 cm total length) and reproductive strategies (oviparous versus viviparous), aiming to correlate these parameters with patterns of energy income. A direct relationship was found between body mass/body length ratio (BCI, body condition index) and meal energetics: the higher the BCI, the higher was the metabolic requirement, whereas BCI was independent of species or of reproductive system effect. Large‐sized snakes thus need a highly diversified and more energy‐rich diet than smaller snakes, supporting previous hypotheses. The simple applicability of this method could be of valuable support in further comparative research work, reducing experimental costs and stimulating further ecological, behavioural, and, possibly, phylogenetic comparisons. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 100 , 307–317.     

The evolution of Metriorhynchoidea (mesoeucrocodylia,thalattosuchia): an integrated approach using geometric morphometrics,analysis of disparity,and biomechanics

Metriorhynchoid crocodylians represent the pinnacle of marine specialization within Archosauria. Not only were they a major component of the Middle Jurassic–Early Cretaceous marine ecosystems, but they provide further examples that extinct crocodilians did not all resemble their modern extant relatives. Here, we use a varied toolkit of techniques, including phylogenetic reconstruction, geometric morphometrics, diversity counts, discrete character disparity analysis, and biomechanical finite‐element analysis (FEA), to examine the macroevolutionary history of this clade. All analyses demonstrate that this clade became more divergent, in terms of biodiversity, form, and function, up until the Jurassic–Cretaceous boundary, after which there is no evidence for recovery or further radiations. A clear evolutionary trend towards hypercarnivory in Dakosaurus is supported by phylogenetic character optimization, morphometrics, and FEA, which also support specialized piscivory within Rhacheosaurus and Cricosaurus. Within Metriorhynchoidea, there is a consistent trend towards increasing marine specialization, with the hypermarine Cricosaurus exhibiting numerous convergences with other Mesozoic marine reptiles (e.g. loss of the deltopectoral crest and retracted external nares). In addition, biomechanics, morphometrics, and character‐disparity analyses consistently distinguish the two newly erected metriorhynchid subfamilies. This study illustrates that together with phylogeny, quantitative assessment of diversity, form, and function help elucidate the macroevolutionary pattern of fossil clades. © 2010 The Linnean Society of London, Zoological Journal of the Linnean Society, 2010, 158 , 801–859.     

Effects of host plant architecture on colonization by galling insects

Abstract: To study the abundance and occurrence of herbivore insects on plants it is important to consider plant characteristics that may control the insects. In this study the following hypotheses were tested: (i) an increase of plant architecture increases species richness and abundance of gall‐inducing insects and (ii) plant architecture increases gall survival and decreases parasitism. Two hundred and forty plants of Baccharis pseudomyriocephala Teodoro (Asteraceae) were sampled, estimating the number of shoots, branches and their biomass. Species richness and abundance of galling insects were estimated per module, and mortality of the galls was assessed. Plant architecture influenced positively species richness, abundance and survival of galls. However, mortality of galling insects by parasitoids was low (13.26%) and was not affected by plant architecture, thus suggesting that other plant characteristics (a bottom‐up pressure) might influence gall‐inducing insect communities more than parasitism (a top‐down pressure). The opposite effect of herbivore insects on plant characteristics must also be considered, and such effects may only be assessed through manipulative experiments.