Nutrient versus seed bank depletion approaches to controlling exotic annuals in threatened Box Gum woodlands

Control of exotic annuals is often a priority when restoring degraded grasslands or shrublands. This study evaluated combinations of nutrient‐depleting (carbon addition) and seed bank‐depleting approaches for controlling exotic annuals, and compared the seed bank depletion technique of spring burning with the more easily applied technique of pulse grazing. Treatments were applied in two Box Gum woodlands over 4 years. Consistent with earlier studies, carbon addition dramatically reduced exotic annuals and available nutrients in all 3 years at both sites. Exotic annual grass abundance was significantly reduced in burnt plots following the first year and in grazed plots following the second year of application. Spring burning or grazing did not reduce available nutrients or exotic annual broadleaf abundance at either site. The effect of carbon addition on exotic annuals and available nutrients was so powerful that no additional benefit of the combination treatments was found, although at one site burning and grazing slightly reduced the effectiveness of carbon addition in suppressing broadleaf exotic annuals. We conclude that nutrient‐depleting approaches are most effective because they control both exotic annual grasses and broadleaf exotics annuals, but given their expense seed bank‐depleting approaches may be more practical where exotic annual grasses dominate. In particular, pulse grazing is readily applied across large areas, offering a relatively simple tool that if appropriately implemented could enhance outcomes of restoration investments in vegetation communities invaded by exotic annual grasses.     

Premature Decline of <Emphasis Type="Italic">Eucalyptus</Emphasis> and Altered Ecosystem Processes in the Absence of Fire in Some Australian Forests

We propose a model of ‘premature tree decline’ whereby an absence of fire hastens the mortality of overstorey eucalypts in some forests. This model is relevant to some temperate Australian forests in which fire regimes have shifted from relatively frequent before European settlement to infrequent following settlement. The increased development of midstorey vegetation and litter accumulation has occurred since European settlement in some specific examples of Australian forests and woodlands. Our model proposes that in the long absence of fire: 1. midstorey vegetation reduces the availability of soil water for eucalypts and; 2. Eucalypts have less access to P and/or cations as these elements become locked up in soil, litter and midstorey biomass. We highlight important knowledge gaps and argue that research into ecological burning, for eucalypt health and other values such as biodiversity, is urgently required.     

Properties of α-bungarotoxin binding sites in foetal human brain

Maximum levels of binding of α-bungarotoxin to foetal human brain membranes were found to remain essentially constant at 30–50 fmol/mg protein (1.1–1.5 pmol/g wet weight in whole brain) between gestational ages of 10 and 24 weeks. Equilibrium binding of α-bungarotoxin to both membranes and to detergent extracts showed saturable specific binding to a single class of sites with K_d (app) values of 3.5 × 10^?9 M and 2.4 × 10^?9 M respectively. Association rate constants, determined from time courses of binding of α-bungarotoxin to membranes and detergent extracts, were 2.3 × 10⁵ M^?1 sec^?1 and 2.6 × 10⁵ M^?1 sec^?1 respectively. Dissociation of α-bungarotoxin from both membrane and detergent extracts showed a rapid initial rate with $\text{T}{}_{\mathrm{<mtext>1</mtext><mtext>2</mtext>}}$ approx 15 min which, in the case of the detergent extract, was followed by a slower dissociation accounting for the remaining 20% of the bound ligand. Competition studies with a number of cholinergic ligands indicated that the α-bungarotoxin-binding sites in foetal brain display a predominantly nicotinic profile.     

Effects of Organic Enrichment of Mine Spoil on Growth and Nutrient Uptake in Oak Seedlings Inoculated with Selected Ectomycorrhizal Fungi

Abstract Poor growth of Quercus robur L. (oak) trees has been reported on mine sites where overburden and subsoil have been used in the reinstatement of surface layers. This stunting has been attributed to a lack of macronutrients and to an adverse soil environment for root growth and mycorrhizal development. Growth, mineral nutrition, and ectomycorrhizal colonization of Q. robur seedlings were studied in an experiment carried out under controlled growing conditions in which mine spoil material was enriched with a leaf litter mulch. Enrichment of mine spoil material was found to produce a significant increase in growth and foliar N concentrations of oak seedlings. Inoculation with three taxa of ectomycorrhizal fungi did not benefit seedlings when mine spoil was the only substrate, possibly due to the poor physical properties of the unamended spoil and lack of nutrients. Inoculation with two taxa, Laccaria laccata and Hebeloma crustuliniforme, isolated from 3‐year‐old trees produced a significant stimulation of growth in the organically enriched treatment, which was believed to be due to greater uptake of mineralized N. However, Cortinarius anomalus isolated from fruit bodies associated with a 15‐year‐old tree did not increase biomass. The presence of organic matter was found to result in a significant stimulation of mycorrhizal infection by both inoculum and contaminant mycobionts. Recommendations are made for improving the establishment and growth of oak seedlings on reinstated sites.     

Growth and nutrient uptake of Newport bluegrass as affected by soil oxygen

Summary An oxygen diffusion rate of 20×10^–8 g cm^–2 min^–1 is required for root growth of Newport bluegrass. The optimum O.D.R. is in a range above 40.During the first growth period, the vegetative growth was not greatly affected by oxygen treatment except during the <1% treatment which did not permit root growth. After clipping, the growth increased with increasing oxygen to a maximum at the 10% treatment and then exhibited a lower growth under the 21% treatment. The plants survived through all oxygen treatments.The concentration of N, P, and K in the leaves generally increased with increased oxygen supply. Na accumulated to a high concentration under the lowest oxygen treatment.Paper No. 1489, Citrus Research Center, Agricultural Experiment Station, Riverside, California.     

Dissecting the specificity of protein-protein interaction in bacterial two-component signaling: orphans and crosstalks

Predictive understanding of the myriads of signal transduction pathways in a cell is an outstanding challenge of systems biology. Such pathways are primarily mediated by specific but transient protein-protein interactions, which are difficult to study experimentally. In this study, we dissect the specificity of protein-protein interactions governing two-component signaling (TCS) systems ubiquitously used in bacteria. Exploiting the large number of sequenced bacterial genomes and an operon structure which packages many pairs of interacting TCS proteins together, we developed a computational approach to extract a molecular interaction code capturing the preferences of a small but critical number of directly interacting residue pairs. This code is found to reflect physical interaction mechanisms, with the strongest signal coming from charged amino acids. It is used to predict the specificity of TCS interaction: Our results compare favorably to most available experimental results, including the prediction of 7 (out of 8 known) interaction partners of orphan signaling proteins in Caulobacter crescentus. Surveying among the available bacterial genomes, our results suggest 15～25% of the TCS proteins could participate in out-of-operon "crosstalks". Additionally, we predict clusters of crosstalking candidates, expanding from the anecdotally known examples in model organisms. The tools and results presented here can be used to guide experimental studies towards a system-level understanding of two-component signaling.     

Regional mapping of facioscapulohumeral muscular dystrophy gene on 4q35: Combined analysis of an international consortium

Members of an international consortium for linkage analysis of the facioscapulohumeral muscular dystrophy (FSHD) gene have pooled data for joint analyses, in an attempt to determine the precise location of the FSHD gene and the order of four DNA markers on 4q35 region. Six laboratories determined a total of 3,078 genotypes in 65 families, consisting of a total of 504 affected subjects and 559 unaffected subjects. For each marker, a mean of 648 meioses were informative. D4S139 and D4S163 were identified as the closest linked markers to the FSHD locus, with 99% upper confidence intervals of recombination fractions of .08 and .10, respectively. We have used the CRI-MAP program to construct the most likely order of cen-D4S171-F11-D4S163-D4S139-FSHD-tel, with favorable odds of 10(8)-10(114) over all other orders except that in which F11 and D4S171 are reversed, for which the odds ratio was 191:1. With this order, the genetic map of this region extends 25.5 cM in males and 13.8 cM in females (averaging 19.5 cM for sexes combined); the sex difference was statistically significant (P = .0013). Comparison between families for the two-point and multipoint lod scores involving FSHD showed no evidence for heterogeneity of this disorder. However, after the completion of this analysis, one large family which might show heterogeneity was identified. In view of this and the fact that all of the linked markers reside on the same side of the FSHD locus, the clinical application of these markers is not recommended at this time.     

Full genome sequencing and genetic characterization of Eubenangee viruses identify Pata virus as a distinct species within the genus Orbivirus

Eubenangee virus has previously been identified as the cause of Tammar sudden death syndrome (TSDS). Eubenangee virus (EUBV), Tilligery virus (TILV), Pata virus (PATAV) and Ngoupe virus (NGOV) are currently all classified within the Eubenangee virus species of the genus Orbivirus, family Reoviridae. Full genome sequencing confirmed that EUBV and TILV (both of which are from Australia) show high levels of aa sequence identity (>92%) in the conserved polymerase VP1(Pol), sub-core VP3(T2) and outer core VP7(T13) proteins, and are therefore appropriately classified within the same virus species. However, they show much lower amino acid (aa) identity levels in their larger outer-capsid protein VP2 (<53%), consistent with membership of two different serotypes - EUBV-1 and EUBV-2 (respectively). In contrast PATAV showed significantly lower levels of aa sequence identity with either EUBV or TILV (with <71% in VP1(Pol) and VP3(T2), and <57% aa identity in VP7(T13)) consistent with membership of a distinct virus species. A proposal has therefore been sent to the Reoviridae Study Group of ICTV to recognise 'Pata virus' as a new Orbivirus species, with the PATAV isolate as serotype 1 (PATAV-1). Amongst the other orbiviruses, PATAV shows closest relationships to Epizootic Haemorrhagic Disease virus (EHDV), with 80.7%, 72.4% and 66.9% aa identity in VP3(T2), VP1(Pol), and VP7(T13) respectively. Although Ngoupe virus was not available for these studies, like PATAV it was isolated in Central Africa, and therefore seems likely to also belong to the new species, possibly as a distinct 'type'. The data presented will facilitate diagnostic assay design and the identification of additional isolates of these viruses.