The key role of the chemolimnion in meromictic cenotes of the Yucatan Peninsula,Mexico

This study tests the ecological and physico-chemical effect of sharp density boundaries of meromictic lakes. The investigation was carried out in Nohoch Hol, an anchialine meromictic cenote situated 2.0 km inland from the Caribbean coast of the Yucatan Peninsula, Mexico. In situ physico-chemical parameters were recorded with a water quality datalogger at depth intervals of 0.5 m. In addition, seven water samples for determination of nutrients, bacterioplankton and phytoplankton in the water column were obtained using SCUBA. Bacterioplankton and phytoplankton densities are low, with concentrations consistent with the oligo- to ultraoligotrophic status of Nohoch Hol indicated by the low nutrient concentrations. The phytoplankton was dominated by the chlorophyte Scenedesmus. Maximum concentrations of bacterio- and phytoplankton were found at 10.0 m depth, the top of the chemolimnion. The similarity analysis clustered the samples in three defined groups: (a) the mixolimnion, (b) the mid- and bottom of the chemolimnion and the monimolimnion, and (c) the top of the chemolimnion. The principal component analysis explained over 85% of the total variance in two components (PC). PC1 was related to turbidity and the aggregation of the chlorophytes at the top of the chemolimnion. PC2 was related to dissolved oxygen and the accumulation of filamentous and total bacteria also at the top of the chemolimnion. The top of the chemolimnion acts as a boundary within the water column to the exchange of dissolved and particulate matter between the mixo and the monimolimnion and as an ecological zone with a crucial role in the biogeochemistry of Nohoch Hol.     

Regulation of chimeric phosphoenolpyruvate carboxykinase genes by the trans-dominant locus TSE1.

Extinction of phosphoenolpyruvate carboxykinase (PCK) gene expression in hepatoma x fibroblast hybrids is mediated by a trans-acting genetic locus designated tissue-specific extinguisher 1 (TSE1). To identify PCK gene sequences required for extinction, hepatoma transfectants expressing PCK-thymidine kinase (TK) chimeric genes were fused with TK- fibroblasts and PCK-TK expression in the resulting hybrids was monitored. Expression of a PCK-TK chimera containing PCK sequences between base pairs -548 and +73 was extinguished in four of five hepatoma transfectants tested, although hybrids derived from one transfectant clone failed to extinguish PCK-TK expression. In contrast, crosses between hepatoma transfectants expressing the herpesvirus TK gene from its own promoter and TK- fibroblasts produced TK+ hybrids; extinction of the transfected TK gene was not observed. Thus, rat PCK gene sequences between base pairs -548 and +73 are sufficient for tissue-specific extinction in hybrid cells. Extinction of PCK-TK gene expression in transfectant microcell hybrids mapped specifically to human chromosome 17, the site of human TSE1.     

Place of Preoperative Treatment of Acromegaly with Somatostatin Analog on Surgical Outcome: A Systematic Review and Meta-Analysis

Context

Transsphenoidal neurosurgery is the accepted first-line treatment of acromegaly in the majority of patients. Previous studies addressing preoperative somatostatin analog (SSA) treatment and subsequent surgical cure rates are conflicting, reporting either benefits or no significant differences.

Objective

The aim of this study, based on a meta-analysis of all published reports, was to investigate whether treatment with SSA before surgery improves the surgical outcome of acromegaly.

Data Sources

All studies of preoperative treatment of acromegaly with SSA were systematically reviewed up to December 2011. We searched the Medline, Embase, Cochrane and Google Scholar electronic databases. Study Selection: The primary endpoint was the biochemical postoperative cure rate. We identified 286 studies, out of which 10 studies (3.49%) fulfilling the eligibility criteria were selected for analysis; five retrospective studies with a control group, two prospective non-randomized trials, and three prospective controlled trials. The meta-analysis was conducted using the random-effects model.

Data Extraction

Data were extracted from published reports by two independent observers. Data Synthesis: A borderline effect was detected in the analysis of all of the trials with control groups, with a pooled odds ratio (OR) for biochemical cure with SSA treatment of 1.62 (95% CI, 0.93–2.82). In the analysis of the three prospective controlled trials, a statistically significant effect was idenfified OR: 3.62 (95% CI, 1.88–6.96).

Conclusions

Preoperative treatment with SSA og GH-secreting pituitary adenomas shows a significant improvement on surgical results. This meta-analysis suggests that in centers without optimal results all patients with a GH-secreting pituitary macroadenoma should be treated with a long-acting SSA prior to surgical treatment.     

Soil oxygen availability and biogeochemistry along rainfall and topographic gradients in upland wet tropical forest soils

We measured soil oxygen concentrations at 10 and 35 cm depths and indices of biogeochemical cycling in upland forest soils along a rainfall and elevation gradient (3500–5000 mm y^–1; 350–1050 masl) and along topographic gradients (ridge to valley, 150 m) in the Luquillo Experimental Forest, Puerto Rico. Along the rainfall gradient, soil O₂ availability decreased significantly with increasing annual rainfall, and reached very low levels (<3%) in individual chambers for up to 25 consecutive weeks over 82 weeks of study. Along localized topographic gradients, soil O₂ concentrations were variable and decreased significantly from ridges to valleys. In the valleys, up to 35% of the observations at 10–35 cm depth were <3% soil O₂. Cross correlation analyses showed that soil O₂ concentrations were significantly positively correlated along the topographic gradient, and were sensitive to rainfall and hydrologic output. Soil O₂ concentrations in valley soils were correlated with rainfall from the previous day, while ridge sites were correlated with cumulative rainfall inputs over 4 weeks. Soils at the wettest point along the rainfall gradient had very high soil methane concentrations (3–24%) indicating a strong influence of anaerobic processes. We measured net methane emission to the atmosphere at the wettest sites of the rainfall gradient, and in the valleys along topographic gradients. Other measures of biogeochemical function such as soil organic matter content and P availability were sensitive to chronic O₂ depletion along the rainfall gradient, but less sensitive to the variable soil O₂ environment exhibited at lower elevations along topographic gradients.     

New Insights into the Drug Binding,Transport and Lipid Flippase Activities of the P-Glycoprotein Multidrug Transporter

The MDR1 P-glycoprotein, an ATP-binding cassette (ABC) superfamily member that functions as an ATP-driven drug efflux pump, has been linked to resistance of human tumors to multiple chemotherapeutic agents. P-glycoprotein binds and actively transports a large variety of hydrophobic drugs and peptides. P-glycoprotein in reconstituted proteoliposomes is also an outwardly directed flippase for membrane phospholipids and simple glycosphinglipids. This review focuses on recent advances in our understanding of P-glycoprotein structure and function, particularly through the use of fluorescence spectroscopic approaches. Progress is being made towards understanding the structure of the transporter, especially the spatial relationship between the two nucleotide-binding domains. Exploration of the P-glycoprotein catalytic cycle using vanadate-trapped complexes has revealed that drug transport likely takes place by concerted conformational changes linked to relaxation of a high energy intermediate. Low resolution mapping of the protein using fluorescence resonance energy transfer showed that both the H and R drug-binding sites are located within the cytoplasmic leaflet. Two drugs can bind to the R-site simultaneously, suggesting that the protein contains a large flexible binding region.     

Rehabilitation of Tropical Lands: A Key to Sustaining Development

Land rehabilitation is proposed as a management strategy to reverse the negative consequences of tropical deforestation and land degradation. We first define the concepts associated with ecosystem modification—conversion, damage, and degradation—and those associated with ecosystem repair—restoration, rehabilitation, and reclamation. We then present a scheme of sustainable land use in the tropics, with illustrations of how rehabilitation and restoration activities fit into the overall scheme of the use of land. Because damaged lands cannot contribute effectively to sustained economic development, land rehabilitation is a necessary step for increasing the chances of attaining sustainability. Approaches for rehabilitating ecosystems are discussed, including the management of stressors and subsidies in relation to their point of interaction in the ecosystem. Finally, we illustrate the concepts of ecosystem rehabilitation of damaged, degraded, and derelict lands with examples of case studies from dry to humid life zones in island and continental situations throughout the tropics. The case studies demonstrate that opportunities for success exist, even with severely degraded lands, but a considerable amount of research remains to be done before we have a full understanding of the complexity of the task facing us.     

Abrupt and altered cell-type specific DNA methylation profiles in blood during acute HIV infection persists despite prompt initiation of ART

HIV-1 disrupts the host epigenetic landscape with consequences for disease pathogenesis, viral persistence, and HIV-associated comorbidities. Here, we examined how soon after infection HIV-associated epigenetic changes may occur in blood and whether early initiation of antiretroviral therapy (ART) impacts epigenetic modifications. We profiled longitudinal genome-wide DNA methylation in monocytes and CD4⁺ T lymphocytes from 22 participants in the RV254/SEARCH010 acute HIV infection (AHI) cohort that diagnoses infection within weeks after estimated exposure and immediately initiates ART. We identified monocytes harbored 22,697 differentially methylated CpGs associated with AHI compared to 294 in CD4⁺ T lymphocytes. ART minimally restored less than 1% of these changes in monocytes and had no effect upon T cells. Monocyte DNA methylation patterns associated with viral load, CD4 count, CD4/CD8 ratio, and longitudinal clinical phenotypes. Our findings suggest HIV-1 rapidly embeds an epigenetic memory not mitigated by ART and support determining epigenetic signatures in precision HIV medicine.Trial Registration:{"type":"clinical-trial","attrs":{"text":"NCT00782808","term_id":"NCT00782808"}}NCT00782808 and {"type":"clinical-trial","attrs":{"text":"NCT00796146","term_id":"NCT00796146"}}NCT00796146.