Single-Cell Heterogeneity Analysis and CRISPR Screen Identify Key β-Cell-Specific Disease Genes

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酿酒酵母DNA复制的精确时空控制

DNA复制是最基本的生命活动之一。DNA复制本身的错误及其过程控制的异常是细胞内基因组不稳定的主要来源,会导致细胞生长异常、衰老、癌变乃至死亡。为了保证基因组DNA能够精确且完整的复制,DNA复制受到严格的调控。在G1期,DNA复制解旋酶的核心组分Mcm2-7复合体被招募到复制起点,获得复制许可资格。进入S期后,在两个周期性蛋白激酶及多个支架蛋白的作用下,复制解旋酶的激活因子Cdc45和GINS复合体被招募至Mcm2-7,形成解旋酶全酶Cdc45-Mcm2-7-GINS (CMG)复合体。随后,众多复制相关蛋白在精准的时空控制下被招募至CMG平台并组装成复制机器,起始DNA双向复制。当相向而行的两个复制叉相遇,复制机器会从DNA链上解离下来,从而完成DNA复制。关于DNA复制过程的研究在近十年来取得了跨越式的突破。本文以酿酒酵母为例,围绕所有真核生物中都高度保守的DNA复制控制开关——CMG解旋酶,对真核生物DNA复制的最新进展进行综述。     

Structural and functional insights into polymorphic enzymes of cytochrome P450 2C8

The cytochrome P450 (CYP) superfamily plays a key role in the oxidative metabolism of a wide range of drugs and exogenous chemicals. CYP2C8 is the principal enzyme responsible for the metabolism of the anti-cancer drug paclitaxel in the human liver. Nearly all previous works about polymorphic variants of CYP2C8 were focused on unpurified proteins, either cells or human liver microsomes; therefore their structure–function relationships were unclear. In this study, two polymorphic enzymes of CYP2C8 (CYP2C8.4 (I264M) and CYP2C8 P404A) were expressed in E. coli and purified. Metabolic activities of paclitaxel by the two purified polymorphic enzymes were observed. The activity of CYP2C8.4 was 25% and CYP2C8 P404A was 30% of that of WT CYP2C8, respectively. Their structure–function relationships were systematically investigated for the first time. Paclitaxel binding ability of CYP2C8.4 increased about two times while CYP2C8 P404A decreased about two times than that of WT CYP2C8. The two polymorphic mutant sites of I264 and P404, located far from active site and substrate binding sites, significantly affect heme and/or substrate binding. This study indicated that two important nonsubstrate recognition site (SRS) residues of CYP2C8 are closely related to heme binding and/or substrate binding. This discovery could be valuable for explaining clinically individual differences in the metabolism of drugs and provides instructed information for individualized medication.     

Statures in Han populations of China

<正>Dear Editor,Shortly after initiating thePhysical Anthropological Research on Han Chineseresearch project,we applied uniform sampling methods as well as methods and instruments of measurement to obtain a complete set of measurements of physical anthropological indicators among Han populations across China.Among these measurements,body stature was a key indicator.Currently,there should be reliable     

Strong effects of hydrologic environment and weak effects of elevated CO<Subscript>2</Subscript> on the invasive weed <Emphasis Type="Italic">Alternanthera philoxeroides</Emphasis> and the biocontrol beetle <Emphasis Type="Italic">Agasicles hygrophila</Emphasis>

Global change, such as elevated CO₂, may alter interactions between invasive plants and biocontrol agents, impacting biocontrol efficacy. Here, we conducted four experiments in Texas, USA to test how elevated CO₂ influences an invasive plant (Alternanthera philoxeroides) and its interactions with an introduced biocontrol beetle (Agasicles hygrophila) in terrestrial (well-watered) and flooded environments. We grew plants for 9 months in ambient or elevated CO₂ (800 ppm) chambers in continuously flooded or well-watered conditions. In no-choice trials, flooding increased leaf toughness and decreased beetle consumption but beetles only oviposited on ambient CO₂ leaves. In choice trials, beetles preferred to feed and oviposit on terrestrial plants but were also less likely to damage elevated CO₂ leaves. Caged beetle populations were larger in terrestrial conditions than aquatic conditions for a second set of plants grown in the chambers. With a third set of plants grown in the ambient or elevated CO₂ chambers, damage for plants placed in the field (aquatic setting) was higher for plants grown in terrestrial conditions vs. flooded conditions at ambient CO₂. Our results suggest that elevated CO₂ will have minor effects on the efficacy of this biocontrol agent by decreasing oviposition and number of leaves damaged, and hydrologic environment may affect invasive plant performance by altering herbivore oviposition and feeding preferences. A broader understanding of the effects of global change on biocontrol will help prevent and manage future spread of invasive plants.     

氮磷肥配施对苦荞根系生理生态及产量的影响

以苦荞品种‘迪庆’为材料,在盆栽试验条件下,研究了氮(纯氮用量分别为0g/kg、0.1g/kg、0.2g/kg)、磷(P2O5用量分别为0.1g/kg和0.2g/kg)配施对苦荞根系生长、生理指标及其产量的影响,旨在为黄土高原苦荞高产优质栽培提供理论依据。结果表明:(1)在相同施磷量条件下,苦荞幼苗的株高、茎粗、茎叶干重、主根长、根表面积、根系体积、根系直径、根系干重以及壮苗指数等均随施氮量的增加而呈先升后降的趋势,但根冠比随施氮量的增加而呈先降后升的趋势;叶片叶绿素含量以及根系活力、酸性磷酸酶(Apase)活性、可溶性蛋白含量和植株氮积累量随施氮量的增加呈抛物线变化趋势,根系硝酸还原酶(NR)活性和植株氮含量随施氮量的增加而增加;而根系可溶性糖含量、超氧化物歧化酶(SOD)活性、过氧化物酶(POD)活性、丙二醛(MDA)含量和游离脯氨酸含量等指标均随施氮量的增加而呈先降后升的趋势,0.1g/kg施氮处理各指标均显著低于其他处理;成熟期单株粒重、百粒重随施氮量的增加呈先升后降的趋势,0.1g/kg施氮处理各指标均显著高于其他处理。(2)在相同施氮量条件下,随着施磷量的增加,苦荞根系酸性磷酸酶(Apase)活性、SOD活性、POD活性、MDA含量、可溶性糖含量、可溶性蛋白以及游离脯氨酸含量等指标均降低,其余各指标则呈增加趋势。(3)无论施磷量条件如何,0.1g/kg的施氮处理下苦荞产量最高,与其他施氮处理相比,在低磷和高磷处理下的增产幅度分别为7.04%~37.40%和14.73%~68.26%;在施氮量一定的情况下,高磷处理比低磷处理增产15.96%~42.00%。(4)在该试验条件下,适当的氮磷肥配施表现出了明显的正加和效应,但过量施肥也有可能导致增产幅度下降,中氮高磷(施纯N量0.1g/kg,施P2O5量0.2g/kg)配施效果最优。     

<Emphasis Type="Italic">Halomonas tibetensis</Emphasis> sp. nov., isolated from saline lakes on Tibetan Plateau

Strains pyc13^T and ZGT13 were isolated from Lake Pengyan and Lake Zigetang on Tibetan Plateau, respectively. Both strains were Gram-negative, catalase- and oxidase-positive, aerobic, rod-shaped, nonmotile, and nonflagellated bacteria. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains pyc13^T and ZGT13 belong to the genus Halomonas, with Halomonas alkalicola 56-L4-10aEn^T as their closest neighbor, showing 97.4% 16S rRNA gene sequence similarity. The predominant respiratory quinone of both strains was Q-9, with Q-8 as a minor component. The major fatty acids of both strains were C_18:1ω6c/C_18:1ω7c, C_16:1ω6c/C_16:1ω7c, C_16:0, and C_12:0 3OH. The polar lipids of both strains consisted of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, glycolipid, phospholipids of unknown structure containing glucosamine, and unidentified phospholipids. The DNA G + C content of pyc13^T and ZGT13 were 62.6 and 63.4 mol%, respectively. The DNA-DNA hybridization values of strain pyc13^T were 34, 41, 61, 35, and 35% with the reference strains H. alkalicola 56-L4-10aEn^T, H. sediminicola CPS11^T, H. mongoliensis Z-7009^T, H. ventosae Al12^T, and H. fontilapidosi 5CR^T, respectively. Phenotypic, biochemical, genotypic, and DNA-DNA hybridization data showed that strains pyc13^T and ZGT13 represent a new species within the genus Halomonas, for which the name H. tibetensis sp. nov. is proposed. The type strain is pyc13^T (= CGMCC 1.15949^T = KCTC 52660^T).