Radiation damage to φX174 DNA and biological effects

Summary Dilute aqueous solutions of biologically active DNA can serve as a simplified model system of the cell. As a biological endpoint the survival of the DNA (after transfection to E. coli spheroplasts) is used. Damage in the DNA, irradiated in water with gamma rays, can be ascribed to reactions with primary waterradicals. By introducing additives in such solutions, which will scavenge the primary waterradicals, competition between a scavenger and DNA for such radicals can be studied. Comparison of different additives makes it possible to decide whether a compound behaves like a simple scavenger, radiosensitizer or like a radioprotector. In this context work has been done with the electron-affinic radiosensitizers metronidazole, misonidazole and nifuroxime. We have found that these wellknown cellular sensitizers do not enhance the inactivation of biologically active DNA. They act as simple competitive scavenger for waterradicals. However, if besides a sensitizer a trace of a metalloporphyrin containing compound (e.g. cyt. c) is present during irradiation an enhanced DNA inactivation, which can be interpreted as sensitization, is observed. Without sensitizer metalloporphyrins induce an enhanced protection of DNA.Apart from these effects the consequences of both chemical-(sulphy-dryl) and enzymatic-(excision; recombination) repair has been studied. It has been found that sulphydryl compounds are able to react with DNA radicals, modifying the radiation damage in such a way that e.g. breaks are prevented. Further in double-stranded DNA a considerable amount of OH and also H radical damage appeared to be reparable by the excision-repair mechanism. However, post-replication repair had only very small or no effect on the amount of damage.     

Adduct formation is involved in radiosensitization, mediated by cytochrome c, of phi X174 DNA by misonidazole

Radiosensitization by misonidazole of biologically active phi X174 DNA, mediated by cytochrome c, is most probably at least partly due to formation of an adduct between sensitizer and DNA, which can be removed from the DNA by a mild alkaline treatment thereby restoring the activity of the DNA.     

A model of clutch size determination in birds

Summary This paper tests the hypothesis that the timing and the size of bird clutches are determined by (1) a tendency to delay reproduction so that the female can store enough internal resources for laying a large clutch; (2) a tendency to breed early because survival of offspring late in the breeding season might be lower than early. These factors are approximated by linear functions in a model. The model predicts that there will be a correlation between early breeding females and those that have large clutches. This agrees with published data for several bird species. Predictions from the model are also made of clutch size and the impact on final clutch-size if one egg is removed or added during the laying. These predictions were compared with data from a crow (Corvus cornix) population and were supported if it is assumed that the formation of an egg is a relatively costly process. More precisely, the model is supported if the formation of an extra egg requires a delay of about four or five days before laying can begin.     

Reproduction in a population of the hooded crow Corvus cornix

Nest density was stable during the 8-year study period. The mean clutch size was 4.3, and the production of fledglings was 2.0 per pair. Incubation started, on average, when there were still two eggs to be laid and lasted for 18 days. Few eggs were lost but 23% of all broods of nestlings were lost to predators. Single nestlings in a brood were not lost to predators but often starved to death, this applied to 25% of all nestlings. A large proportion of the nestlings were probably infected by Syngamus tracheae , and some of these succumbed during the first weeks after fledging. A comparison with other studies of crow populations shows that the major causes of breeding failure are different in different populations. The causes of variation in breeding success between populations are discussed, especially considering the role of nonbreeding crows.     

Reaction rate of OH radicals with phi X174 DNA: influence of salt and scavenger

A derivation is given for the dependence of the rate constant of the reaction of OH radicals with a spherical macromolecule on the rate by which such radicals are scavenged by the medium. Experiments were carried out with oxygenated solutions of dilute single-stranded phi X174 DNA at 10(-4)M NaCl (large reaction radius of DNA) or at 10(-4)M NaCl + MgCl2 (small reaction radius) with t-butanol as a scavenger. The results of these experiments cannot be described by simple second-order competition, but can be explained by the predicted dependence of the rate constant of the reaction OH + DNA on the concentration of t-butanol. Furthermore, the results show that only part of the reactions of OH radicals with phi X174 DNA leads to DNA inactivation, and that even at zero scavenger concentration OH radicals are scavenged by other molecules than DNA, presumably impurities remaining even after careful purification of the DNA.