Determination of complementary antibody pairs using protein A capture with the AlphaScreen assay format

The utility of antibody reagents for the detection of specific cellular targets for both research and diagnostic applications is widespread and continually expanding. Often it is useful to develop specific antibodies as reagent pairs that distinguish different epitopes of the target such that sandwich enzyme-linked immunosorbent assay can be used for selective and specific detection. However, the identification of pairing antibodies is often cumbersome and labor-intensive even with the use of designed peptide-specific epitopes as antigens. We have developed a robust and high-throughput method for identifying pairing complementary antibodies derived either from commercial sources or during a rabbit hybridoma monoclonal screening and selection process using protein A capture with the AlphaScreen bead-based assay format. We demonstrate the value and effectiveness of this assay with three protein targets: Akt2, ATF3, and NAEβ (the β-subunit of the neddylation activation enzyme).     

Mediational Effects of Self-Efficacy Dimensions in the Relationship between Knowledge of Dengue and Dengue Preventive Behaviour with Respect to Control of Dengue Outbreaks: A Structural Equation Model of a Cross-Sectional Survey

Background

Dengue fever is endemic in Malaysia, with frequent major outbreaks in urban areas. The major control strategy relies on health promotional campaigns aimed at encouraging people to reduce mosquito breeding sites close to people''s homes. However, such campaigns have not always been 100% effective. The concept of self-efficacy is an area of increasing research interest in understanding how health promotion can be most effective. This paper reports on a study of the impact of self-efficacy on dengue knowledge and dengue preventive behaviour.

Methods and Findings

We recruited 280 adults from 27 post-outbreak villages in the state of Terengganu, east coast of Malaysia. Measures of health promotion and educational intervention activities and types of communication during outbreak, level of dengue knowledge, level and strength of self-efficacy and dengue preventive behaviour were obtained via face-to-face interviews and questionnaires. A structural equation model was tested and fitted the data well (χ² = 71.659, df = 40, p = 0.002, RMSEA = 0.053, CFI = 0.973, TLI = 0.963). Mass media, local contact and direct information-giving sessions significantly predicted level of knowledge of dengue. Level and strength of self-efficacy fully mediated the relationship between knowledge of dengue and dengue preventive behaviours. Strength of self-efficacy acted as partial mediator in the relationship between knowledge of dengue and dengue preventive behaviours.

Conclusions

To control and prevent dengue outbreaks by behavioural measures, health promotion and educational interventions during outbreaks should now focus on those approaches that are most likely to increase the level and strength of self-efficacy.     

Meta-analyses of adverse effects data derived from randomised controlled trials as compared to observational studies: methodological overview

Background

There is considerable debate as to the relative merits of using randomised controlled trial (RCT) data as opposed to observational data in systematic reviews of adverse effects. This meta-analysis of meta-analyses aimed to assess the level of agreement or disagreement in the estimates of harm derived from meta-analysis of RCTs as compared to meta-analysis of observational studies.

Methods and Findings

Searches were carried out in ten databases in addition to reference checking, contacting experts, citation searches, and hand-searching key journals, conference proceedings, and Web sites. Studies were included where a pooled relative measure of an adverse effect (odds ratio or risk ratio) from RCTs could be directly compared, using the ratio of odds ratios, with the pooled estimate for the same adverse effect arising from observational studies. Nineteen studies, yielding 58 meta-analyses, were identified for inclusion. The pooled ratio of odds ratios of RCTs compared to observational studies was estimated to be 1.03 (95% confidence interval 0.93–1.15). There was less discrepancy with larger studies. The symmetric funnel plot suggests that there is no consistent difference between risk estimates from meta-analysis of RCT data and those from meta-analysis of observational studies. In almost all instances, the estimates of harm from meta-analyses of the different study designs had 95% confidence intervals that overlapped (54/58, 93%). In terms of statistical significance, in nearly two-thirds (37/58, 64%), the results agreed (both studies showing a significant increase or significant decrease or both showing no significant difference). In only one meta-analysis about one adverse effect was there opposing statistical significance.

Conclusions

Empirical evidence from this overview indicates that there is no difference on average in the risk estimate of adverse effects of an intervention derived from meta-analyses of RCTs and meta-analyses of observational studies. This suggests that systematic reviews of adverse effects should not be restricted to specific study types. Please see later in the article for the Editors'' Summary     

Assessment of factors influencing morale in the elderly

Background

We examined the relationship between morale measured by the Philadelphia Geriatric Morale Scale (PGC) and disability, social support, religiosity, and personality traits. Instruments predicting morale were then tested against PGC domains.

Methods

The study utilized a cross-sectional survey with a multistage cluster sampling design. Instruments used were disability (disease burden; WHO Disability Score-II, WHODAS-II), social support (Duke Social Support Scale, DUSOCS; Lubben Social Network Scale, LSNS-6; Medical Outcomes Study Social Support Survey, MOS-SSS), religiosity (Revised Intrinsic-Extrinsic Religious Orientation Scale, I/E-R), and personality (Ten-Item Personality Inventory, TIPI). These were plotted as bar charts against PGC, resolved with one-way ANOVA and Kruskal-Wallis tests, then corrected for multiple comparisons. This process was repeated with PGC domains. Contribution of factors was modeled using population attributable risk (PAR) and odds ratios. Effect of confounders such as gender, age, and ethnicity were checked using binary logistic regression.

Results

All instruments showed clear relationships with PGC, with WHODAS-II and DUSOCS performing well (ANOVA p<0.001). For PGC domains, attitude toward aging and lonely dissatisfaction trended together, while agitation did not. PAR, odds ratios, and Exp(β) were disability (WHODAS-II: 28.5%, 3.8, 2.8), social support (DUSOCS: 28.0%, 3.4, 2.2), religiosity (I/E-R: 21.6%, 3.2, 2.1), and personality (TIPI: 27.9%, 3.6, 2.4). Combined PAR was 70.9%.

Conclusions

Disability, social support, religiosity, and personality strongly influence morale in the elderly. WHODAS-II and DUSOCS perform best in measuring disability and social support respectively.     

Spatiotemporal distribution of the hemlock woolly adelgid predator Laricobius nigrinus after release in eastern hemlock forests

• 1 Post‐release distributions of Laricobius nigrinus, a biological control predator of hemlock woolly adelgid Adelges tsugae Annand, were evaluated at eight hemlock forests in the eastern U.S.A.
• 2 Vertical dispersal of F₁ and F₂L. nigrinus were assessed from within three crown strata (<7, 7–15 and >15 m) at four release sites.
• 3 Horizontal distributions of L. nigrinus within the forest surrounding central release areas were observed in two separate studies, which included (i) release and monitor to capture parent and F₁ movement by sampling the immature life stages of the offspring, and (ii) assessment of F₃ to F₆ generations where beetles were previously determined to be established.
• 4 Laricobius nigrinus, released on lower crown branches, oviposited within the upper crown stratum and were slow to disperse from release trees. Monitoring L. nigrinus only from the lower crown would likely underestimate its presence because 86% of the F₂ generation were detected above 15 m.
• 5 By the fifth generation, the frequency distributions of larvae increased at increasing distance from release areas; larvae were recovered at a maximum distance of approximately 400 m and the spread rate was approximately 39 m/year.
• 6 Slow dispersal of L. nigrinus and uninterrupted recovery of six generations in the presence of fluctuating prey density support its continued release as part of the A. tsugae biological control programme. These data contribute toward improved release strategies and monitoring for this biological control agent.

     

Engagement of ubiquitination and de-ubiquitination at rostral ventrolateral medulla in experimental brain death

Background

Whereas brain death is a vitally important clinical phenomenon, our contemporary understanding on its underlying cellular mechanisms remains elusive. This study evaluated whether the ubiquitin-proteasome system (UPS) in the rostral ventrolateral medulla (RVLM), a neural substrate that our laboratory identified previously to be intimately related to brain death, is engaged in this fatal process.

Methods

We performed proteomics, Western Blot, real-time PCR, ELISA and pharmacological experiments in conjunction with a clinically relevant experimental endotoxemia model of brain death based on intravenous administration of Escherichia coli lipopolysaccharide in adult male Sprague–Dawley rats.

Results

Proteomics, Western blot and enzyme activity analyses demonstrated that polyubiquitination was preserved and de-ubiquitination by ubiquitin C-terminal hydrolase isozyme-L1 (UCH-L1) was sustained, alongside increased monoubiquitin availability or proteasome activity in RVLM over the course of experimental endotoxemia. However, real-time PCR revealed no significant alteration in proteasome subunit alpha type-1, ubiquitin or UCH-L1 at mRNA level. Functionally, whereas microinjection into the bilateral RVLM of proteasome inhibitors (lactacystin or proteasome inhibitor II) potentiated survival, an inhibitor of ubiquitin-recycling (ubiquitin aldehyde) or an UCH-L1 inhibitor exacerbated mortality.

Conclusions

We proposed previously that the progression towards brain death entails a tug-of-war between pro-death and pro-life programs in RVLM. It is conceivable that ubiquitination or de-ubiquitination in RVLM participate in brain death by regulating the degradation of the proteins involved in those programs.     

In situ nurseries enhance coral transplant growth in sedimented waters

In situ nurseries have been a crucial part of coral reef restoration initiatives for the past two decades. However, the advantages over direct transplantation in sedimented waters has yet to be examined. In the present study, we showed that Pachyseris speciosa and Pocillopora damicornis fragments reared in in situ nurseries (NR) in Singapore’s sedimented waters grew significantly faster (by three to five times) than those which were directly transplanted (DT) onto the substrates. The increased growth rate during the nursery phase augmented the size of NR transplants, and had a flow-on effect on their performance during the post-transplantation phase. Overall, the maximum diameter of the NR transplants was 1.8–2.7 times larger than DT transplants after 11 months. The growth enhancement of the nursery-reared transplants improved the cost-effectiveness of our restoration effort: the estimated cost per centimetre growth of NR transplants was one-fifth of the DT corals despite the additional costs incurred to construct the nurseries. These results highlight that coral nurseries are beneficial to reef restoration in chronically sedimented waters.     

Phytoplankton primary productivity seasonality and changes in a small African lake,Lake Hora-Kilole,Ethiopia

The seasonality of primary productivity by phytoplankton in relation to physico-chemical and biological variables was studied in Lake Hora-Kilole from August 2007 to May 2008. In 1989, the Mojo River was temporarily diverted to flow into the lake, which substantially changed its physico-chemical conditions and the composition of the phytoplankton. Primary productivity was controlled primarily by soluble reactive phosphorus (SRP), ammonia (NH₃), temperature and euphotic depth (Z_eu). The light-saturated rate of photosynthesis (A_max) varied from 370 to 3 843?mg O₂ m^?3 h^?1 with the maximum value corresponding to the seasonal maximum of phytoplankton biomass. Compared to the period before the diversion of the river, A_max was reduced by more than ninety-fold in early 1990s and by less than five-fold in 2007 and 2008. Similarly, average phytoplankton chlorophyll a was reduced by more than 2.5 × in the early 1990s and to less than 50% in 2007 and 2008. This highlights the importance of the diversion river water on the physico-chemical and biological environment of the lake.