A novel salt-tolerant endo-β-1,4-glucanase Cel5A in Vibrio sp. G21 isolated from mangrove soil

Although cellulases have been isolated from various microorganisms, no functional cellulase gene has been reported in the Vibrio genus until now. In this report, a novel endo-β-1,4-glucanase gene, cel5A, 1,362 bp in length, was cloned from a newly isolated bacterium, Vibrio sp. G21. The deduced protein of cel5A contains a catalytic domain of glycosyl hydrolase family 5 (GH5), followed by a cellulose binding domain (CBM2). The GH5 domain shows the highest sequence similarity (69%) to the bifunctional beta 1,4-endoglucanase/cellobiohydrolase from Teredinibacter turnerae T7902. The mature Cel5A enzyme was overexpressed in Escherichia coli and purified to homogeneity. The optimal pH and temperature of the recombinant enzyme were determined to be 6.5–7.5 and 50°C, respectively. Cel5A was stable over a wide range of pH and retained more than 90% of total activity even after treatment in pH 5.5–10.5 for 1 h, indicating high alkali resistance. Moreover, the enzyme was activated after pretreatment with mild alkali, a novel characteristic that has not been previously reported in other cellulases. Cel5A also showed a high level of salt tolerance. Its activity rose to 1.6-fold in 0.5 M NaCl and remained elevated even in 4 M NaCl. Further experimentation demonstrated that the thermostability of Cel5A was improved in 0.4 M NaCl. In addition, Cel5A showed specific activity towards β-1,4-linkage of amorphous region of lignocellulose, and the main final hydrolysis product of carboxymethylcellulose sodium and cellooligosaccharides was cellobiose. As an alkali-activated and salt-tolerant enzyme, Cel5A is an ideal candidate for further research and industrial applications.     

Heterologous expression and characterization of a recombinant thermostable alkylsulfatase (<Emphasis Type="Italic">sdsAP</Emphasis>)

A novel alkylsulfatase gene, sdsAP, was cloned from a newly isolated bacterium Pseudomonas sp. S9. It encoded a protein of 675 amino acids with a calculated molecular mass of 74.9 kDa. The protein contained a typical N-terminal signal peptide of 41 amino acid residues, followed by a metallo-β-lactamase like domain at the N-terminus and a SCP-2-like domain at the C-terminus. This domain organization mode suggested that it belonged to the type III sulfatase. The mature alkylsulfatase was overexpressed in Escherichia coli. The optimal temperature and pH of the recombinant SdsAP were 70°C and 9.0, respectively. Notably, at optimal conditions, the purified recombinant SdsAP had a high specific activity of 23.25 μmol min⁻¹ mg⁻¹, a K _{m (app)} of 264.3 μmol, and a V _{max (app)} of 33.8 μmol min⁻¹ mg⁻¹ for SDS. Additionally, it still retained more than 90% activity after incubation at 65°C for 1 h, which was much different from other alkylsulfatases reported. The recombinant enzyme hydrolyzed the primary alkyl sulfate such as sodium octyl sulfate and sodium dodecyl sulfate (SDS). It was a Zn²⁺-containing and Ca²⁺ activated alkylsulfatase. This is the first report to explore the various characteristics of the heterologous recombinant alkylsulfatase in details. These favorable properties could make SdsAP attractive to be useful in the degradation of SDS-containing waste.     

Genome sequence of Anaerophaga sp. strain HS1, a novel, moderately thermophilic, strictly anaerobic bacterium isolated from hot spring sediment

Anaerophaga sp. strain HS1 was isolated from offshore hot spring sediment in Xiamen, China. It was identified as a novel, moderately thermophilic, strictly anaerobic bacterium affiliated with the family Marinilabiaceae and showed xylanase activity. Here, we describe the 3.88-Mb draft genome sequence of Anaerophaga sp. strain HS1 and the annotation analysis of related xylanase genes.     

Interpopulation trophic niches and ontogenetic shifts of a mangrove fish predator

Fish trophic niches reflect important ecological interactions and provide insight into the structure of mangrove food webs. Few studies have been conducted in mangrove fish predators to investigate interpopulation trophic niches and ontogenetic shifts. Using stable isotope analysis and two complementary approaches, the authors investigated trophic niche patterns within and between two ontogenetic groups (juveniles and sub-adults) of a generalist predator (Acentrogobius viridipunctatus) in four mangroves with heterogeneous environmental conditions (e.g., tidal regimes, salinity fluctuations and mangrove tree community). The authors hypothesized that the trophic niche between populations would vary regionally and trophic position would increase consistently from juvenile to sub-adult stages. The results revealed that both δ¹³C and δ¹⁵N values varied greatly across populations and between ontogenetic groups, and complex spatio-ontogenetic variations were expressed by Layman's metrics. They also found some niche separation in space, which is most likely related to resource availability in spatially diverse ecosystems. In addition, trophic niche position increased consistently from juveniles to sub-adults, indicating ontogenetic feeding shifts. The isotopic plasticity index and Fulton's condition index also showed significant spatial-ontogenetic variation, which is consistent with optimal foraging theory. The findings highlight that trophic plasticity has a high adaptive value for mangrove fish predators in dynamic ecosystems.     

Medium Bandgap Polymer Donor Based on Bi(trialkylsilylthienyl‐benzo[1,2‐b:4,5‐b′]‐difuran) for High Performance Nonfullerene Polymer Solar Cells

A new 2D‐conjugated medium bandgap donor–acceptor copolymer, J81 , based on benzodifuran with trialkylsilyl thiophene side chains as donor unit and fluorobenzothiazole as acceptor, is synthesized and successfully used in nonfullerene polymer solar cells (PSCs) with low bandgap n‐type organic semiconductor (n‐OS) 3,9‐bis(2‐methylene‐ (3‐(1,1‐dicyanomethylene)‐indanone)‐5,5,11,11‐tetrakis(4‐ hexylphenyl)‐dithieno[2,3‐d:2′,3′‐d′]‐s‐indaceno[1,2‐b:5,6‐b′]‐ dithiophene (ITIC) and m ‐ITIC as acceptor. J81 possesses a lower‐lying highest occupied molecular orbital (HOMO) energy level of ?5.43 eV and medium bandgap of 1.93 eV with complementary absorption in the visible–near infrared region with the n‐OS acceptor. The PSCs based on J81 :ITIC and J81 :m ‐ITIC yield high power conversion efficiency of 10.60% and 11.05%, respectively, with high V _oc of 0.95–0.96 V benefit from the lower‐lying HOMO energy level of J81 donor. The work indicates that J81 is another promising polymer donor for the nonfullerene PSCs.     

古尔班通古特沙漠生物土壤结皮下土壤有机碳垂直分布特征及影响因素

为了探究沙漠不同生物土壤结皮类型覆盖下土壤有机碳(SOC)垂直分布特征及与土壤理化因素的关系,解析影响因素,以古尔班通古特沙漠腹地藻类、藓类生物土壤结皮和裸沙三种不同地被覆盖类型为研究对象,通过野外采集不同类型结皮样品及其下层0-2 cm、2-5 cm、5-10 cm、10-20 cm、20 -30 cm、30-50 cm、50-70 cm以及70-100 cm土层土壤(裸沙对照),测定不同土层的SOC含量及土壤理化指标,开展相关研究。结果表明:(1)不同地被类型下0-100 cm SOC含量随着土壤深度增加呈减小的趋势,在10-30 cm 土层存在SOC含量升高的现象,藓类、藻类和裸沙三种地被类型0-100 cm土层SOC含量范围分别在:1.61-2.70、1.41-2.56、1.21-1.92 g/kg;(2)不同地被类型下同一土层SOC含量在0-5 cm土层存在显著差异,5-100 cm土层SOC整体无显著差异,同层SOC含量均表现为:藓类>藻类>裸沙对照;(3)Pearson法分析结果表明不同地被覆盖下SOC含量与养分(全氮、全磷)呈现正相关关系,与pH和电导率(EC)呈现负相关关系。通过结构方程模型结果表明,土壤养分和粒径(砂粒占比)是影响垂直分布的主要因子,其中粒径是裸沙和藻类的最主要影响因子,藓类最重要的影响因子是养分(全磷)。生物土壤结皮的发育会逐步提高土壤碳的积累,改变SOC的垂直分布特征,对SOC的影响主要集中在5 cm以上土层,土壤理化特征对垂直分布特征具有调控作用。     

Genome sequence of Pseudomonas sp. Strain S9, an extracellular arylsulfatase-producing bacterium isolated from Mangrove Soil

Pseudomonas sp. strain S9 was originally isolated from mangrove soil in Xiamen, China. It is an aerobic bacterium which shows extracellular arylsulfatase activity. Here, we describe the 4.8-Mb draft genome sequence of Pseudomonas sp. S9, which exhibits novel cysteine-type sulfatases.     

致赤大袋鼠皮肤化脓的荚膜血清A型多杀性巴氏杆菌的分离鉴定

正多杀性巴氏杆菌(Pasteurella multocida)是巴氏杆菌属的成员之一,能感染鸡、鸭、兔、猪和牛等多种家养动物和部分野生动物,不同动物感染后的疾病命名不同,如禽霍乱(Eveleth et al.,1949)、猪肺疫和牛出血性败血症(陆承平,2001)。该菌为革兰氏阴性球杆菌或短杆菌,新分离菌株瑞氏染色两极着色明显,有荚膜,人工培养     

未培养厌氧甲烷氧化古菌来源细胞色素c的异源表达优化

细胞色素c是一类在生物体内广泛存在的血红素蛋白,由亚铁血红素和细胞色素c前体组成,在生物电子学、生物医药以及污染物降解等领域具有很大的潜在应用价值.然而,细胞色素c很难通过异源表达而大量获取.对于未培养厌氧甲烷氧化古菌来源的细胞色素c (CytC4),目前尚无成功表达和功能研究.本研究首先通过在CytC4的N端分别引入...     

Improvement of Photovoltaic Performance of Polymer Solar Cells by Rational Molecular Optimization of Organic Molecule Acceptors

Two n‐type organic semiconductor (n‐OS) small molecules m‐ITIC‐2F and m‐ITIC‐4F with fluorinated 2‐(2,3‐dihydro‐3‐oxo‐1H‐inden‐1‐ylidene)propanedinitrile (IC) terminal moieties are prepared, for the application as an acceptor in polymer solar cells (PSCs), to further improve the photovoltaic performance of the n‐OS acceptor 3,9‐bis(2‐methylene‐(3‐(1,1‐dicyanomethylene) indanone) ‐5,5,11,11‐tetrakis(3‐hexylphenyl)‐dithieno[2,3‐d:2′,3′‐d′]‐sindaceno[1,2‐b:5,6‐b′]‐dithiophene (m‐ITIC). Compared to m‐ITIC, these two new acceptors show redshifted absorption, higher molecular packing order, and improved electron mobilities. The power conversion efficiencies (PCE) of the as‐cast PSCs with m‐ITIC‐2F or m‐ITIC‐4F as an acceptor and a low‐cost donor–acceptor (D–A) copolymer PTQ10 as a donor reach 11.57% and 11.64%, respectively, which are among the highest efficiency for the as‐cast PSCs so far. Furthermore, after thermal annealing treatment, improved molecular packing and enhanced phase separation are observed, and the higher PCE of 12.53% is achieved for both PSCs based on the two acceptors. The respective and unique advantage with the intrinsic high degree of order, molecular packing, and electron mobilities of these two acceptors will be suitable to match with different p‐type organic semiconductor donors for higher PCE values, which provide a great potential for the PSCs commercialization in the near future. These results indicate that rational molecular structure optimization is of great importance to further improve photovoltaic properties of the photovoltaic materials.