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41.
To gain insight into the evolution of rodent major histocompatibility complex (MHC) class I genes and identify important (conserved) nonclassical class I (class Ib) gene products and residues in these proteins,
sixPeromyscus maniculatus MHC (Pema) class I cDNA clones were isolated and sequenced. FivePema class I cDNAs appeared most similar to mouse and rat classical class I (class Ia) genes. One exhibited highest similarity
to anH2 class Ib gene,H2-T23 (encoding the Qa1 antigen). Phylogenetic trees constructed withPema, RT1, andH2 class I sequences suggested that the lineages of some rodent class Ib genes (e.g.,T23 andT24) originated prior toMus andPeromyscus speciation [>50 million years (My) ago]. Sequences of four Qa1-like proteins from three species permitted the identification
of ten Qa1-specific amino acids. On the basis of molecular modeling, three residues showed the potential to interact with
T-cell receptors and three residues (all corresponding to polymorphic positions among H2 class Ia proteins) were predicted
to influence antigen binding. The recognition of mouse Qa1 proteins by a subset of T-cells in influenced by a locus,Qdm, which encodes the H2-D leader peptide. One of thePema class I cDNA clones classified asH2-K, D/L-like (class Ia) is predicted to encode an identical peptide, implying that an antigen binding protein (Qa1) and the antigen
to which it binds (the product ofQdm) has been conserved for over 50 My.
The nucleotide sequence data reported in this paper have been submitted to the GenBank nucleotide sequence database and have
been assigned the accession numbers U12822 (Pm13), U12885 (Pm41), U12886 (Pm52), U12887 (Pm62), U16846 (Pm11), and U16847 (Pm53) 相似文献
42.
Summary The Linnaean nameCryptozo?n proliferum
Hall was proposed in 1883 for a previously undescribed life-form preserved in spectacular exposures of Cambrian limestones in
New York State, USA. It is now recognised that these are exposures of stromatolitic microbialites, laminated organosedimentary
structures formed from interaction between a benthic microbial community (BMC) and the environment. Microbialites are neither
fossil organisms nor trace fossils. These complex structures are the products of dissipative, self-organising systems involving
a BMC, the external environment and the accreting microbialite. Functionally analogous BMCs of different species compositions
may build similar structures in similar environments in quite separate periods. The type exposures ofCryptozo?n proliferum show objects composed of complex, concentric rings, up to a metre in diameter, that have grown laterally without any restriction
other than that provided by neighbouring structures. They are not the relicts of domes truncated by penecontemporaneous erosion
or Pleistocene glaciation, but depositional forms in which upward growth was restricted. Analogous modern structures occur
on a reef platform along the north east shore of hyposaline Lake Clifton, Western Australia. These are tabular thrombolitic
microbialites that vary lakeward across the reef platform from low, compound structures to discrete, concentric structures
up to 50 cm high. The Lake Clifton forms are, in turn, morphological analogues of microatolls found on coral reef platforms.
Coral microatolls are coral colonies with flat, dead tops and living perimeters in which upward growth is constrained by the
sea surface. In shallow water they form circular rims of laterally growing coral around a dead centre. In deeper water they
form coral heads that develop flat tops on reaching sea level. It is concluded that both the tabular microbialites of Lake
Clifton and the type exposures ofCryptozo?n proliferum are analogous to coral microatolls in both form and origin-structures that have been able to grow laterally, but in which
upward growth is restricted by subaerial exposure. Similar microatoll microbialites have been described from other modern
environments, including Great Salt Lake, Utah, USA and Stocking Island, Exuma Cays, Bahamas. Ancient examples may include
some of the “tufa” deposits of the Basal Purbeck Formation in Dorset, UK, as well as the coalesced domal bioherms of the Upper
Cambrian Arrinthrunga Formation of the Georgina Basin, Central Australia, and the “washbowl” structures described from the
B?tsfjord Formation of the Varanger Peninsula, north Norway. Progress towards a reliable interpretation of ancient microbialites
depends on an understanding of modern environments in which analogous structures are forming. This study of microatolls has
demonstrated that other sessile life forms may create colonial ecomorphs that, used cautiously, can serve as analogues for
understanding the factors controlling the growth and form of microbialites. The surprising lack of pre-Pleistocene examples
of microatolls recorded to date has simply been due to their lack of recognition in the geological record. They occur in sequences
from the Proterozoic onwards, and provide powerful environmental indicators of ancient reef platforms on which biological
growth was adjusted to contemporary sea level. 相似文献
43.
44.
45.
Age-Dependent Impairment of Mitochondrial Function in Primate Brain 总被引:11,自引:2,他引:9
Allen C. Bowling Elizabeth M. Mutisya Lary C. Walker† Donald L. Price†‡§ Linda C. Cork† M. Hint Beal 《Journal of neurochemistry》1993,60(5):1964-1967
Abstract: It has been hypothesized that some of the functional impairments associated with aging are the result of increasing oxidative damage to mitochondrial DNA that produces defects in oxidative phosphorylation. To test this hypothesis, we examined the enzymes that catalyze oxidative phosphorylation in crude mitochondrial preparations from frontoparietal cortex of 20 rhesus monkeys (5-34 years old). Samples were assayed for complex I, complex II-III, complex IV, complex V, and citrate synthase activities. When enzyme activities were corrected for citrate synthase activities (to account for variable degrees of mitochondrial enrichment), linear regression analysis demonstrated a significant negative correlation of the activities of complex I (p < 0.002) and complex IV (p < 0.03) with age but no significant change in complex II-III or complex V activities. Relative to animals 6.9 ± 0.9 years old (n = 7), the citrate synthase-corrected activity of complex I was reduced by 17% in animals 22.5 ± 0.9 years old (n = 6) (p < 0.05) and by 22% in animals 30.7 ± 0.9 years old (n = 7) (p < 0.01). Similar age-related reductions in the activities of complexes I and IV were obtained when enzyme activities were corrected for complex II-III activity. These findings show an age-associated progressive impairment of mitochondrial complex I and complex IV activities in cerebral cortices of primates. 相似文献
46.
47.
Donald H. Burke Linda A. Raubeson Marie Alberti John E. Hearst Elizabeth T. Jordan Susan A. Kirch Angela E. C. Valinski David S. Conant Diana B. Stein 《Plant Systematics and Evolution》1993,187(1-4):89-102
We examinedchlL (frxC) gene evolution using several approaches. Sequences from the chloroplast genome of the fernPolystichum acrostichoides and from the cyanobacteriumSynechococcus sp. 7002 were determined and found to be highly conserved. A complete physical map of the fern chloroplast genome and partial maps of other vascular plant taxa show thatchlL is located primarily in the small single copy region as inMarchantia polymorpha. A survey of a wide variety of non-angiospermous vascular plant DNAs shows thatchlL is widely distributed but has been lost in the pteridophytePsilotum and (presumably independently) within the Gnetalean gymnosperms.The namefrxC was originally used to denote a gene encoding a product with probable Fe : S cluster binding activity. This activity was postulated due to the amino acid sequence similarity between this product and the Fe : S-binding nitrogenase iron proteinnifH. Fe : S-binding is a property shared by ferredoxins, which are denoted by the prefix frx. However, this gene does not encode a ferredoxin. It is much larger than any known ferredoxin, it binds its Fe : S cluster between two halves of a homodimer (Fujita & al. 1989,Burke & al. 1993 a, c) instead of within a single subunit, and it lacks the pattern of clustered cysteines present in all ferredoxins (Meyer 1988). Therefore, we use the namechlL to recognize the sequence and functional similarities to the bacterial PChlide reductase subunit,bchL. Similar usage has been adopted for this (Suzuki & Bauer 1992) and other (Choquet & al. 1992,Burke & al. 1993b) PChlide reductase subunits. 相似文献
48.
Francesco Ricci Kshitij Tandon Maria Moßhammer Ellie H.-J. Cho Linda L. Blackall Michael Kühl Heroen Verbruggen 《Environmental microbiology》2023,25(8):1505-1521
The coral skeleton harbours a diverse community of bacteria and microeukaryotes exposed to light, O2 and pH gradients, but how such physicochemical gradients affect the coral skeleton microbiome remains unclear. In this study, we employed chemical imaging of O2 and pH, hyperspectral reflectance imaging and spatially resolved taxonomic and inferred functional microbiome characterization to explore links between the skeleton microenvironment and microbiome in the reef-building corals Porites lutea and Paragoniastrea benhami. The physicochemical environment was more stable in the deep skeleton, and the diversity and evenness of the bacterial community increased with skeletal depth, suggesting that the microbiome was stratified along the physicochemical gradients. The bulk of the coral skeleton was in a low O2 habitat, whereas pH varied from pH 6–9 with depth. Physicochemical gradients of O2 and pH of the coral skeleton explained the β-diversity of the bacterial communities, and skeletal layers that showed O2 peaks had a higher relative abundance of endolithic algae, reflecting a link between the abiotic environment and the microbiome composition. Our study links the physicochemical, microbial and functional landscapes of the coral skeleton and provides new insights into the involvement of skeletal microbes in the coral holobiont metabolism. 相似文献
49.
Beecham L 《BMJ (Clinical research ed.)》1993,306(6892):1618
50.
Ralph Bertrand-Garcia Linda L. Walling Toshio Murashige 《American journal of botany》1992,79(5):481-487
Callus lines of Nicotiana tabacum were selected for competence and lack of competence in shoot formation. Changes in total and chromosomal polypeptides in these shoot-forming and nonshoot-forming tobacco cultures were examined by twodimensional polyacrylamide gel electrophoresis. Qualitative and quantitative differences in total, nonhistone chromosomal, and basic chromosomal polypeptides were evident throughout the 7-d test period. The analysis of total proteins identified polypeptides specific to shoot-forming and nonshoot-forming tissue during the 7-d sampling period. A small number of basic chromosomal proteins were found solely in shoot-forming or nonshoot-forming tissue. One basic chromosomal protein was detected in only nonshoot-forming tissue at all sampling times. Two proteins, although present in shoot-forming tissue, were present at elevated levels in the nonshoot-forming cultures. No temporal changes in basic proteins over the 7-d incubation period were observed. Qualitative differences in total nonhistone chromosomal polypeptides in the shoot-forming and nonshoot-forming tissue were also observed. Differences in chromosomal polypeptides were observed. In contrast to the basic chromosomal proteins, temporal variation in the nonhistone chromosomal polypeptides was demonstrated. Throughout the 7-d sampling period, 29 and 12 nonhistone chromosomal polypeptides varied qualitatively in shoot-forming and nonshoot-forming callus cultures, respectively. In vitro labeling with 32P-orthophosphate indicated that approximately 1.0% and 0.3% of the nonhistone chromosomal proteins were phosphorylated in the shoot-forming and nonshoot-forming cultures. Of these phosphorylated polypeptides, one was present in nonshoot-forming tissue and three were detected only in the shoot-forming tissue. Phosphorylation occurred at serine or threonine residues. 相似文献