Long noncoding RNA CYTOR triggers gastric cancer progression by targeting miR-103/RAB10

Growing evidence has indicated that the long noncoding RNA (IncRNA) CYTOR is involved in the initiation and progression of malignancies,including gastric cancer...     

卧龙自然保护区典型生态系统服务时空变化研究

自然保护区作为生态系统服务的产生区和生物多样性保护的重点区,评估其关键生态系统服务,对提高保护区管理水平和生态保护与建设效率有重要意义。利用CASA模型、RUSLE模型、InVEST模型及水量平衡原理等方法分别定量评估了卧龙自然保护区2000年和2015年碳固定（NPP）、土壤保持、生境质量和水源涵养4种生态系统服务并分析了其时空分布及其变化特征,揭示了不同地形位梯度和土地利用类型上生态系统服务的差异,识别了生态系统服务的热点区域。研究结果揭示了2000-2015年4种生态系统服务及其变化的时空异质性：1）研究期间保护区4种生态系统服务供给量均有所增加,且增益面积大于减损面积;2）空间上,NPP、土壤保持和生境质量3种服务表现为东南高、西北低,水源涵养空间分布无明显规律,4种服务的空间分布特征均变化不大且保持相对稳定;3）4种生态系统服务空间分布及变化与地形位和土地利用类型有关。4种服务的高值和增益的优势分布区均位于较低地形位指数梯度上,以保护区东南部最为突出;林地和草地是对保护区生态系统服务贡献较大的土地利用类型,尤以林地突出;4）热点分析表明保护区东南部是主要的生态系统服务供给热点区,研究期间Ⅳ类热点区面积显著增加。结合研究区域生态系统特征和生态恢复与管理政策,探讨分析了目标生态系统服务时空变化的自然生态和社会经济驱动力,为本区域生态系统恢复和生物多样性保护提供依据和建议。     

JQ-1 ameliorates schistosomiasis liver granuloma in mice by suppressing male and female reproductive systems and egg development of Schistosoma japonicum

Schistosomiasis is a serious and widespread parasitic disease caused by infection with Schistosoma. Because the parasite’s eggs are primarily responsible for schistosomiasis dissemination and pathogenesis, inhibiting egg production is a potential approach to control the spread and severity of the disease. The bromodomain and extra-terminal (BET) proteins represent promising targets for the development of epigenetic drugs against Schistosoma. JQ-1 is a selective inhibitor of the BET protein family. In the present study, JQ-1 was applied to S. japonicum in vitro. By using laser confocal scanning microscopy and EdU incorporation assays, we showed that application of JQ-1 to worms in vitro affected egg laying and the development of both the male and female reproductive systems. JQ-1 also inhibited the expression of the reproductive-related genes SjPlk1 and SjNanos1 in S. japonicum. Mice infected with S. japonicum were treated with JQ-1 during egg granuloma formation. JQ-1 treatment significantly reduced the size of the liver granulomas and levels of serum alanine aminotransferase and aspartate aminotransferase in mice and suppressed both egg laying and the development of male and female S. japonicum reproductive systems in vivo. Moreover, the mRNA expression levels of some proinflammatory cytokines were decreased in the parasites. Our findings suggest that JQ-1 treatment attenuates S. japonicum egg–induced hepatic granuloma due at least in part to suppressing the development of the reproductive system and egg production of S. japonicum. These findings further suggest that JQ-1 or other BET inhibitors warrant additional study as a new approach for the treatment or prevention of schistosomiasis.     

三江源国家公园草地地上生物量时空动态及其气候影响

三江源区位于青藏高原腹地,作为长江、黄河、澜沧江三大河流的发源地,是我国重要的生态安全屏障。基于三江源区域草地AGB的野外调查数据,本研究采用多种机器学习算法集成分析的方式构建模型,实现了高精度的三江源国家公园草地AGB时空估算。基于AGB时空模拟结果,分析了近19年(2000—2018年)三江源国家公园区域草地AGB的时空动态变化。研究结果显示：(1)通过多种机器学习结合贝叶斯平均模型,草地AGB模拟值与实测值的r为0.88,RMSE为71.60g/m²,表明多模型集成分析的方式对草地AGB估算获得了较好的模拟效果。(2)三江源国家公园区域草地AGB的空间分布具有明显的空间异质性,呈从东南向西北递减的趋势。(3)2000—2018年长江源国家公园、黄河源国家公园和澜沧江国家公园区域草地AGB多年平均值分别为82.96 g/m²、117.54g/m²和168.39 g/m²。(4)近19年间,在黄河和长江源园区受到温度上升的影响草地AGB呈现出非显著性上升趋势;澜沧江区域,由于2015和2016年的...     

“环境工程微生物学”线上线下混合式教学的改革与实践

“环境工程微生物学”是环境工程专业的一门基础课程,但由于环境微生物学概念抽象、内容繁冗,大部分学生在课堂上注意力不集中,难以理解和应用生物氧化过程、微生物在环境工程中的作用等内容,教学效果较差。为提高学生的学习效果和教师的教学感受,基于超星泛雅网络教学平台,对环境工程微生物学的教学内容、教学方法、考核方式等进行线上线下混合式教学改革与实践。实践结果表明改革后的课程激发了学生内在学习的动力,使学生具有了自学和继续学习的能力,在知识、能力、素质这3个方面取得了成效,并有效提升了学生的专业能力和综合素质;同时,课程教师的教学方法、教学能力、教学感受以及信息技术均得到提升和改进,加强了课程创新实践,提升了环境工程类专业课程的教学质量。     

淋病奈瑟菌肽基脯氨酰异构酶的原核表达及其作为候选疫苗的初步评价

【背景】淋病是我国主要的性传播疾病之一,感染淋病奈瑟菌可促进人类免疫缺陷病毒(human immunodeficiency virus, HIV)的传播和感染。目前我国淋病发病人数呈上升趋势,随着多重耐药菌株的出现,亟须研发保护性疫苗来防治淋病的传播和感染。【目的】分析淋病奈瑟菌(Neisseria gonorrhoeae, NG)肽基脯氨酰异构酶(peptidyl-prolyl isomerase, PPIase)蛋白的高级结构和表位,探讨其作为疫苗和分子诊断靶点的潜力。【方法】利用生物信息学软件分析PPIase蛋白的极性、亲水性、柔韧性、表面可及性、二级和三级结构,以及T、B细胞表位等;用pET32a(+)质粒构建PPIase蛋白的原核表达系统并纯化蛋白,用纯化的重组蛋白和超声波破碎的NG全菌抗原分别免疫BALB/c小鼠,收获免疫血清;制备NG全细胞抗原,分别以全细胞抗原酶联免疫吸附试验(enzyme linked immunosorbent assay, ELISA)和间接免疫荧光试验检测重组PPIase蛋白血清抗体与NG全细胞表面抗原的结合情况。【结果】生物信息学分析结果显示,...     

The role of protein arginine methyltransferase 7 in human developmentally arrested embryos cultured in vitro

Human embryos of in vitro fertilization (IVF) are often susceptible to developmental arrest,which greatly reduces the efficiency of IVF treatment.In recent year...     

Contrasting Patterns in the Early Stage of SARS-CoV-2 Evolution between Humans and Minks

One of the unique features of SARS-CoV-2 is its apparent neutral evolution during the early pandemic (before February 2020). This contrasts with the preceding SARS-CoV epidemics, where viruses evolved adaptively. SARS-CoV-2 may exhibit a unique or adaptive feature which deviates from other coronaviruses. Alternatively, the virus may have been cryptically circulating in humans for a sufficient time to have acquired adaptive changes before the onset of the current pandemic. To test the scenarios above, we analyzed the SARS-CoV-2 sequences from minks (Neovision vision) and parental humans. In the early phase of the mink epidemic (April to May 2020), nonsynonymous to synonymous mutation ratio per site in the spike protein is 2.93, indicating a selection process favoring adaptive amino acid changes. Mutations in the spike protein were concentrated within its receptor-binding domain and receptor-binding motif. An excess of high-frequency derived variants produced by genetic hitchhiking was found during the middle (June to July 2020) and late phase I (August to September 2020) of the mink epidemic. In contrast, the site frequency spectra of early SARS-CoV-2 in humans only show an excess of low-frequency mutations, consistent with the recent outbreak of the virus. Strong positive selection in the mink SARS-CoV-2 implies that the virus may not be preadapted to a wide range of hosts and illustrates how a virus evolves to establish a continuous infection in a new host. Therefore, the lack of positive selection signal during the early pandemic in humans deserves further investigation.     

CRISPR/Cas系统与结核病防控新措施相关性研究

结核分枝杆菌(Mycobacterium tuberculosis,MTB,以下简称结核杆菌)感染引起的结核病仍然是严重影响人类健康全球性重大传染病。全球约1/4人口是结核杆菌的潜伏感染者。2019年,世界卫生组织(Worldhealthorganization,WHO)报道全球约150万人死于结核病。深入研究结核杆菌生物学有望为结核病防控提供新工具。成簇规律性间隔短回文重复(Clusteredregularlyinterspacedshort palindromic repeats,CRISPR)/Cas是细菌免疫系统的重要成分,在结核杆菌等分枝杆菌中也广泛存在,同时,也是分枝杆菌基因编辑的重要工具。本文结合课题组研究工作,综述了结核杆菌III-A型CRISPR/Cas系统各组分的生物学功能以及与致病的相关性,CRISPR/Cas编辑工具在诊断治疗耐药结核杆菌和结核病防控新措施中的进展。     

Retinal Src homology region 2-containing protein tyrosine phosphatase 2 silencing alleviates diabetic retinopathy via suppressing inflammatory response and oxidative stress by regulating Yes-associated protein 1 activity

Diabetic retinopathy (DR) is the prevalent microvascular complication of diabetes mellitus (DM), and it may lead to permanent blindness. The previous publication has indicated that both inflammatory response and oxidative stress are critical factors involved in DR progression, however, the accurate regulatory mechanism remains to be revealed. Src homology region 2 (SH2)-containing protein tyrosine phosphatase 2 (SHP2), a member of the protein tyrosine phosphatase family, was reported to play a role in diabetic nephropathy, whereas its function in DR was unknown and required further exploration. The level of phosphorylated, not the total, SHP2 increased in the retinas of rats with streptozotocin injection-induced DM. Further, the intravitreal injection of SHP2 shRNA lentivirus alleviated retinal pathological changes, and inhibited inflammatory response and oxidative stress, which were accompanied with Yes-associated protein 1 (YAP1) deactivation in DR rats. Additional co-immunoprecipitation results confirmed the interaction of SHP2 and YAP1. Collectively, our data preliminarily show that DR amelioration-induced by SHP2 inhibition in rats may attribute to the deactivation of YAP1 pathway.