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101.
Leslie A. Kuhn Craig A. Swanson Michael E. Pique John A. Tainer Elizabeth D. Getzoff 《Proteins》1995,23(4):536-547
Water-protein interactions drive protein folding, stabilize the folded structure, and influence molecular recognition and catalysis. We analyzed the closest protein contacts of 10,837 water molecules in crystallographic structures to define a specific hydrophilicity scale reflecting specific rather than bulk solvent interactions. The tendencies of different atom and residue types to be the nearest protein neighbors of bound water molecules correlated with other hydrophobicity scales, verified the relevance of crystallographically determined water positions, and provided a direct experimental measure of water affinity in the context of the folded protein. This specific hydrophilicity was highly correlated with hydrogen-bonding capacity, and correlated better with experimental than computationally derived measures of partitioning between aqueous and organic phases. Atoms with related chemistry clustered with respect to the number of bound water molecules. Neutral and negatively charged oxygen atoms were the most hydrophilic, followed by positively-charged then neutral nitrogen atoms, followed by carbon and sulfur atoms. Agreement between observed side-chain specific hydrophilicity values and values derived from the atomic hydrophilicity scale showed that hydrophilicity values can be synthesized for different functional groups, such as unusual side or main chains, discontinuous epitopes, and drug molecules. Two methods of atomic hydrophilicity analysis provided a measure of complementarity in the interfaces of trypsin:pancreatic trypsin inhibitor and HIV protease:U-75875 inhibitor complexes. © 1995 Wiley-Liss, Inc. 相似文献
102.
Is hydrogen peroxide a second messenger of salicylic acid in systemic acquired resistance? 总被引:18,自引:1,他引:17
Urs Neuenschwander Bernard Vernooij Leslie Friedrich Scott Uknes Helmut Kessmann John Ryals 《The Plant journal : for cell and molecular biology》1995,8(2):227-233
Elevated levels of salicylic acid (SA) are required for the induction of systemic acquired resistance (SAR) in plants. Recently, a salicylic acid-binding protein (SABP) isolated from tobacco was shown to have catalase activity. Based on this finding elevated levels of hydrogen peroxide (H2 O2 ) were postulated to act as a second messenger of SA in the SAR signal transduction pathway. A series of experiments have been carried out to clarify the role of H2 O2 in SAR-signaling. No increase of H2 O2 was found during the onset of SAR. Induction of the SAR gene, PR-1, by H2 O2 and H2 O2 -inducing chemicals is strongly suppressed in transgenic tobacco plants that express the bacterial salicylate hydroxylase gene, indicating that H2 O2 induction of SAR genes is dependent on SA accumulation. Following treatment of plants with increasing concentrations of H2 O2 , a dose-dependent accumulation of total SA species was found, suggesting that H2 O2 may induce PR-1 gene expression through SA accumulation. While the results do not support a role for H2 O2 in SAR signaling, it is suggested that SA inhibition of catalase activity may be important in tissues undergoing a hypersensitive response. 相似文献
103.
104.
Grazyna Formicka-Kozlowska Leslie D. Pettit Ian Steel Bianka Hartrodt Klaus Neubert Piotr Rekowski Gotfryd Kupryszewski 《Journal of inorganic biochemistry》1984,22(3):155-163
The synthesis of β-casomorphin-5 (Tyr-Pro-Phe-Pro-Gly, H2L) and a number of its peptide fragments is described. Complexes formed between these peptides and Cu(II) have been investigated spectrophotometrically, using CD and EPR spectroscopy, and potentiometrically. Results show that, with tyrosine as the N-terminal residue, the major complex formed at physiological pH is the dimeric species, [Cu2L2], bonded through the phenolic O? of the Tyr residue of one ligand and the N-terminal amine nitrogen of the second ligand molecule. There is no evidence for coordination through the peptide nitrogens unless the terminal Tyr group is removed. 相似文献
105.
Miriam F. Bennett Leslie E. Reap 《Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology》1978,125(3):205-207
Summary Adult newts,Notophthalmus viridescens, were maintained for 8 days at a constant temperature of 11.0±0.5 °C. In one series, the control animals were kept in constant darkness (DD), while the experimental newts were exposed to alternating 12-hour periods of light and dark (LD). In a second series, controlNotophthalmus lived in DD, and experimental animals lived in constant light (LL). In both series, the newts were sacrificed on the ninth day when blood smears were prepared. Differential counts of the leukocytes of animals that lived under the LD regimen were the same as those of controlNotophthalmus (Table 1). However, in newts that were maintained in LL, the neutrophils increased and the lymphocytes decreased relative to those types of cells in the controls (Table 1). Those changes indicate that continuous light constitutes stress for this species.Supported in part by a grant from the Committee on Research, Travel and Sabbatical Leaves, Colby College 相似文献
106.
107.
A method has been developed for the separation of radioactive inorganic phosphate from rat liver homogenates by a combination of ion-exchange and precipitation chromatography. The method has been applied to normal rat liver. 相似文献
108.
Leaves of greenhouse grown grasses had free protein amino acid contents of generally less than 5 % total amino acids, while field collected grasses averaged 14.7 % free protein amino acid contents. Taxonomic patterns are detectable in the total leaf amino acid profiles of grasses from both sources, those of pooids being distinguishable from those of chloridoids and panicoids, and those of danthonioids showing an intermediate pattern. Leaf profiles of Oryza, Stipeae, and Ehrharteae resemble one another, and are more like those of pooids than those of panicoids. Variations in Thr and Leu are apparently associated with differences in photosynthetic pathway. Grass leaves are generally low in total amino acid contents (2.2 ? 1.0 g % fr. wt), with Ile, Val and Met + Cys identified as the limiting essential amino acids. However, the nutritional ‘chemical scores’ of grass leaf proteins are high (75 %, based on the WHO scoring pattern). 相似文献
109.
John R. Porter Michael F. Allen Leslie C. Lane Michael G. Boosalis 《Plant and Soil》1982,68(2):283-287
Summary A chlorotic condition of soybeans in the river valleys of eastern Nebraska was studied. The pattern of chlorosis, presence
of petiolar necrosis, reductions in rhizobial and mycorrhizal infection, and plant and soil chemical analyses suggest that
the condition is more complex than normal iron deficiency chlorosis or other mineral deficiencies or toxicities. Nodulation
is almost totally inhibited in affected plants. Mycorrhizal fungi, while able to infect early in the season, do not persist
on affected plants. Breakdown of endodermis was observed in the roots of affected plants. The factors contributing to this
condition have not yet been determined.
Published with the approval of the director as Paper No. 5672, Journal Series, Nebraska Agricultural Experiment Station. 相似文献
110.
Reduction of 3-ketosucrose (1) with sodium borohydride gave mainly α-d-allopyranosyl β-d-fructofuranoside (2) characterized as its octabenzoate. Using sodium borodeuteride, [3-2H]allo-sucrose (5) and [3-2H]sucrose (6) were obtained in the ratio 12:1. The mixture was fractionated on Dowex-50 X8 resin (Ca2+ form), and the [3-2H] derivatives were isolated as their octa-acetates. Inspection of the 13C-n.m.r. spectra of 5 and 6 enabled the C-3 signals to be assigned. allo-Sucrose (2) was more readily obtained by oxidation of sucrose with dimethyl sulphoxide-acetic anhydride followed by reduction with sodium borohydride and fractionation on Dowex-50 X8 (Ca2+) resin. Tritylation of 2 followed by acetylation gave, after chromatography, the 6,1′,6′-tritrityl ether (9, 10%), the 6,6′-ditrityl ether (10, 26%), and a mixture of monotrityl ethers (20%). Hydrogenolysis of 9 and 10 gave the penta-acetate and hexa-acetate, respectively, with no detectable migration of AcO-4. Treatment of 2 with sulphuryl chloride at -50° gave the 6,6′-dichloride. 相似文献