Lipids Alter Rhodopsin Function via Ligand-like and Solvent-like Interactions

Rhodopsin, a prototypical G protein-coupled receptor, is a membrane protein that can sense dim light. This highly effective photoreceptor is known to be sensitive to the composition of its lipidic environment, but the molecular mechanisms underlying this fine-tuned modulation of the receptor’s function and structural stability are not fully understood. There are two competing hypotheses to explain how this occurs: 1) lipid modulation occurs via solvent-like interactions, where lipid composition controls membrane properties like hydrophobic thickness, which in turn modulate the protein’s conformational equilibrium; or 2) protein-lipid interactions are ligand-like, with specific hot spots and long-lived binding events. By analyzing an ensemble of all-atom molecular dynamics simulations of five different states of rhodopsin, we show that a local ordering effect takes place in the membrane upon receptor activation. Likewise, docosahexaenoic acid acyl tails and phosphatidylethanolamine headgroups behave like weak ligands, preferentially binding to the receptor in inactive-like conformations and inducing subtle but significant structural changes.     

A hydrogeologic model of submarine groundwater discharge: Florida intercomparison experiment

A hydrogeologic model of submarine groundwater discharge (SGD) to the near-shore environment at a site on the northeast Gulf of Mexico has been developed to provide a basis for comparison with measurements of SGD made using seepage meters, and with estimates derived from chemical tracers. The hydrogeologic model incorporates the seaward movement of fresh water and the recirculation of sea water at the fresh water–salt water interface. The hydrostratigraphy at the site includes the Surficial Aquifer, a thin confining unit known as the Intracoastal Formation, and the underlying Upper Floridan Aquifer. It is not possible to explain either the magnitude or spatial distribution of SGD recorded by the seepage meters, or the magnitude of SGD estimated using radium and radon tracers, if only steady state flow in the Surficial Aquifer is considered. Nor does it appear likely that the difference between the model-based prediction of SGD and the field-based estimates can be fully resolved by leakage across the Intracoastal Formation from a source in the Floridan Aquifer. These results suggest that processes driven by variations in fluid pressure in the marine water column, which occur on a variety of time scales, be examined to quantify their contribution to fluid circulation within and discharge from that segment of the Surficial Aquifer located beyond the low tide line.     

The SERK1 receptor‐like kinase regulates organ separation in Arabidopsis flowers

Through a sensitized screen for novel components of pathways regulating organ separation in Arabidopsis flowers, we have found that the leucine‐rich repeat receptor‐like kinase SOMATIC EMBRYOGENESIS RECEPTOR‐LIKE KINASE1 (SERK1) acts as a negative regulator of abscission. Mutations in SERK1 dominantly rescue abscission in flowers without functional NEVERSHED (NEV), an ADP‐ribosylation factor GTPase‐activating protein required for floral organ shedding. We previously reported that the organization of the Golgi apparatus and location of the trans‐Golgi network (TGN) are altered in nev mutant flowers. Disruption of SERK1 restores Golgi structure and the close association of the TGN in nev flowers, suggesting that defects in these organelles may be responsible for the block in abscission. We have also found that the abscission zones of nev serk1 flowers are enlarged compared to wild‐type. A similar phenotype was previously observed in plants constitutively expressing a putative ligand required for organ separation, INFLORESCENCE DEFICIENT IN ABSCISSION (IDA), suggesting that signalling through IDA and its proposed receptors, HAESA and HAESA‐LIKE2, may be deregulated in nev serk1 abscission zone cells. Our studies indicate that in addition to its previously characterized roles in stamen development and brassinosteroid perception, SERK1 plays a unique role in modulating the loss of cell adhesion that occurs during organ abscission.