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Lenka Franková Katarína Cibírová Károly Bóka Otília Gašparíková Mikuláš Pšenák 《Biologia》2006,61(1):97-102
Colchicum autumnale L. is a monocotyledonous geophyte with hysteranthous leaves, i.e. flowering and leaf growth occur in different time periods.
Because after the starch, the second prominent storage compound of corm is represented by proteins, we were interested in
nitrogen remobilisation during the annual life cycle of C. autumnale. In this context the content of soluble and insoluble proteins were measured in parallel with determination of some exo-and
endopeptidase activities. Our results indicate that the continual proteolysis occurs in both mother and new daughter corms
during the whole life-cycle of the plant. L-Ala-aminopeptidase and trypsin-like endopeptidase were the most active peptidases
in both mother and daughter corms. As the protein level of mother corm did not change significantly during the development
of the future above-ground part under the soil surface (the first, autumnal developmental stage), the developmental profile
of nitrate reductase activity was estimated followed by evaluation of total nitrogen and amino acid contents. Significant
activity of root nitrate reductase was detected in the roots only in the second, vernal stage. Our results showed that the
stored proteins constituted a relevant nitrogen source partly required by the growth processes of the late autumnal stage,
but mainly by the intensive growth of leaves and reproductive structures during the second, photosynthetically active stage
of the life-cycle. 相似文献
13.
Niclas Thomas Lenka Matejovicova Wichat Srikusalanukul John Shawe-Taylor Benny Chain 《PloS one》2012,7(9)
Naive T lymphocytes exhibit extensive antigen-independent recirculation between blood and lymph nodes, where they may encounter dendritic cells carrying cognate antigen. We examine how long different T cells may spend in an individual lymph node by examining data from long term cannulation of blood and efferent lymphatics of a single lymph node in the sheep. We determine empirically the distribution of transit times of migrating T cells by applying the Least Absolute Shrinkage & Selection Operator () or regularised to fit experimental data describing the proportion of labelled infused cells in blood and efferent lymphatics over time. The optimal inferred solution reveals a distribution with high variance and strong skew. The mode transit time is typically between 10 and 20 hours, but a significant number of cells spend more than 70 hours before exiting. We complement the empirical machine learning based approach by modelling lymphocyte passage through the lymph node . On the basis of previous two photon analysis of lymphocyte movement, we optimised distributions which describe the transit times (first passage times) of discrete one dimensional and continuous (Brownian) three dimensional random walks with drift. The optimal fit is obtained when drift is small, i.e. the ratio of probabilities of migrating forward and backward within the node is close to one. These distributions are qualitatively similar to the inferred empirical distribution, with high variance and strong skew. In contrast, an optimised normal distribution of transit times (symmetrical around mean) fitted the data poorly. The results demonstrate that the rapid recirculation of lymphocytes observed at a macro level is compatible with predominantly randomised movement within lymph nodes, and significant probabilities of long transit times. We discuss how this pattern of migration may contribute to facilitating interactions between low frequency T cells and antigen presenting cells carrying cognate antigen. 相似文献
14.
Barbora Vidová Zuzana Šramková Lenka Tišáková Michaela Oravkinová Andrej Godány 《Biologia》2014,69(5):541-556
Endolysins as a class of antibacterial enzymes are expected to become a very useful tool for many purposes to control spreading of, e.g., multiresistant bacteria in different environments. Their antimicrobial properties could be broadened or altered by mutagenesis, domain swapping or gene shuffling. Therefore, the specific designing of endolysins to achieve their desired properties is challenging. This work is focused on the in silico analysis of protein domains presence in sequences of phage and prophage endolysins, followed by the study of variety of domain combinations in the individual endolysin types. The multiple sequence alignment of endolysin sequences revealed the recognition of sequence types with typical domain arrangement and conserved amino acids, divided according to the target substrate in bacterial cell walls. The five protein families of catalytic domains are specifically occurring in dependence of bacterial Gram-type. The presence, types and numbers of binding domains within endolysin sequences were also studied. The obtained results enable a more targeted design of endolysins with required antimicrobial properties. 相似文献
15.
Abelovska L Bujdos M Kubova J Petrezselyova S Nosek J Tomaska L 《Canadian journal of microbiology》2007,53(4):533-535
The cellular functions are strongly influenced by the composition of the environment. In particular, phenotypes of microbial strains are modulated by concentrations of ions in the culture medium, and differences in element levels may be responsible for a phenotypic variability observed when microbial strains are grown on synthetic versus complex media. In this report, we analyzed the levels of nine elements (magnesium, potassium, sodium, calcium, iron, copper, manganese, zinc, and phosphorus) and sulphate ions in commercially available peptone and yeast extract and compared them with those in yeast nitrogen base routinely used for preparation of synthetic minimal media. We observed that whereas some elements are present at similar levels, the levels of others differ by a factor as high as 20. The observed differences should be taken into account when interpreting different phenotypes observed for microbial strains grown on synthetic versus complex media. 相似文献
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17.
Biomimetic apatite coatings--carbonate substitution and preferred growth orientation 总被引:3,自引:0,他引:3
Biomimetic apatite coatings were obtained by soaking chemically treated titanium in SBF with different HCO(3)(-) concentration. XRD, FTIR and Raman analyses were used to characterize phase composition and degree of carbonate substitution. The microstructure, elemental composition and preferred alignment of biomimetically precipitated crystallites were characterized by cross-sectional TEM analyses. According to XRD, the phase composition of precipitated coatings on chemically pre-treated titanium after exposure to SBF was identified as hydroxy carbonated apatite (HCA). A preferred c-axis orientation of the deposited crystals can be supposed due to the high relative peak intensities of the (002) diffraction line at 2theta=26 degrees compared to the 100% intensity peak of the (211) plane at 2theta=32 degrees . The crystallite size in direction of the c-axis of HCA decreased from 26 nm in SBF5 with a HCO(3)(-) concentration of 5 mmol/l to 19 nm in SBF27 with a HCO(3)(-) concentration of 27 mmol/l. Cross-sectional TEM analyses revealed that all distances correspond exactly to the hexagonal structure of hydroxyapatite. The HCO(3)(-) content in SBF also influences the composition of precipitated calcium phosphates. Biomimetic apatites were shown to have a general formula of Ca(10-x-y)Mg(y)(HPO(4))(x-z)(CO(3))(z)(PO(4))(6-x)(OH)(2-x-w)(CO(3))(w/2). According to FTIR and Raman analyses, it can be supposed that as long as the HCO(3)(-) concentration in the testing solutions is below 20 mmol/l, only B-type HCA (0相似文献
18.
Release of resource constraints allows greater carbon allocation to secondary metabolites and storage in winter wheat 下载免费PDF全文
Jianbei Huang Almuth Hammerbacher Lenka Forkelová Henrik Hartmann 《Plant, cell & environment》2017,40(5):672-685
The atmospheric CO2 concentration ([CO2]) is rapidly increasing, and this may have substantial impact on how plants allocate metabolic resources. A thorough understanding of allocation priorities can be achieved by modifying [CO2] over a large gradient, including low [CO2], thereby altering plant carbon (C) availability. Such information is of critical importance for understanding plant responses to global environmental change. We quantified the percentage of daytime whole‐plant net assimilation (A) allocated to night‐time respiration (R), structural growth (SG), nonstructural carbohydrates (NSC) and secondary metabolites (SMs) during 8 weeks of vegetative growth in winter wheat (Triticum aestivum) growing at low, ambient and elevated [CO2] (170, 390 and 680 ppm). R/A remained relatively constant over a large gradient of [CO2]. However, with increasing C availability, the fraction of assimilation allocated to biomass (SG + NSC + SMs), in particular NSC and SMs, increased. At low [CO2], biomass and NSC increased in leaves but decreased in stems and roots, which may help plants achieve a functional equilibrium, that is, overcome the most severe resource limitation. These results reveal that increasing C availability from rising [CO2] releases allocation constraints, thereby allowing greater investment into long‐term survival in the form of NSC and SMs. 相似文献
19.
Cyntia Anabel Amorosi Helena Myskóva Mariela Roxana Monti Carlos Enrique Argara?a Masashi Morita Stephan Kemp Raquel Dodelson de Kremer Lenka Dvoráková Ana María Oller de Ramírez 《PloS one》2012,7(12)
X-linked adrenoleukodystrophy (X-ALD) is an inherited metabolic disease associated with mutations in the ABCD1 gene that encodes an ATP-binding cassette transporter protein, ALDP. The disease is characterized by increased concentrations of very long-chain fatty acids (VLCFAs) in plasma and in adrenal, testicular and nervous tissues, due to a defect in peroxisomal VLCFA β-oxidation. In the present study, we analyzed 10 male patients and 17 female carriers from 10 unrelated pedigrees with X-ALD from Argentina. By sequencing the ABCD1 we detected 9 different mutations, 8 of which were novel. These new mutations were verified by a combination of methods that included both functional (western blot and peroxisomal VLCFA β-oxidation) and bioinformatics analysis. The spectrum of novel mutations consists of 3 frameshift (p.Ser284fs*16, p.Glu380Argfs*21 and p.Thr254Argfs*82); a deletion (p.Ser572_Asp575del); a splicing mutation (c.1081+5G>C) and 3 missense mutations (p.Ala341Asp, p.His420Pro and p.Tyr547Cys). In one patient 2 changes were found: a known missense (p.His669Arg) and an unpublished amino acid substitution (p.Ala19Ser). In vitro studies suggest that p.Ala19Ser is a polymorphism. Moreover, we identified two novel intronic polymorphisms and two amino acid polymorphisms. In conclusion, this study extends the spectrum of mutation in X-ALD and facilitates the identification of heterozygous females. 相似文献
20.
Karthick Raja Muthu Raja Lucie Rihova Lenka Zahradova Maria Klincova Miroslav Penka Roman Hajek 《PloS one》2012,7(10)