Microtubule affinity–regulating kinase 4 with an Alzheimer's disease-related mutation promotes tau accumulation and exacerbates neurodegeneration

Accumulation of the microtubule-associated protein tau is associated with Alzheimer''s disease (AD). In AD brain, tau is abnormally phosphorylated at many sites, and phosphorylation at Ser-262 and Ser-356 plays critical roles in tau accumulation and toxicity. Microtubule affinity–regulating kinase 4 (MARK4) phosphorylates tau at those sites, and a double de novo mutation in the linker region of MARK4, ΔG316E317D, is associated with an elevated risk of AD. However, it remains unclear how this mutation affects phosphorylation, aggregation, and accumulation of tau and tau-induced neurodegeneration. Here, we report that MARK4^ΔG316E317D increases the abundance of highly phosphorylated, insoluble tau species and exacerbates neurodegeneration via Ser-262/356–dependent and –independent mechanisms. Using transgenic Drosophila expressing human MARK4 (MARK4^wt) or a mutant version of MARK4 (MARK4^ΔG316E317D), we found that coexpression of MARK4^wt and MARK4^ΔG316E317D increased total tau levels and enhanced tau-induced neurodegeneration and that MARK4^ΔG316E317D had more potent effects than MARK4^wt. Interestingly, the in vitro kinase activities of MARK4^wt and MARK4^ΔG316E317D were similar. When tau phosphorylation at Ser-262 and Ser-356 was blocked by alanine substitutions, MARK4^wt did not promote tau accumulation or exacerbate neurodegeneration, whereas coexpression of MARK4^ΔG316E317D did. Both MARK4^wt and MARK4^ΔG316E317D increased the levels of oligomeric forms of tau; however, only MARK4^ΔG316E317D further increased the detergent insolubility of tau in vivo. Together, these findings suggest that MARK4^ΔG316E317D increases tau levels and exacerbates tau toxicity via a novel gain-of-function mechanism and that modification in this region of MARK4 may affect disease pathogenesis.     

An in-house real-time polymerase chain reaction: standardisation and comparison with the Cobas Amplicor HBV monitor and Cobas AmpliPrep/Cobas TaqMan HBV tests for the quantification of hepatitis B virus DNA

This study aimed to standardise an in-house real-time polymerase chain reaction (rtPCR) to allow quantification of hepatitis B virus (HBV) DNA in serum or plasma samples, and to compare this method with two commercial assays, the Cobas Amplicor HBV monitor and the Cobas AmpliPrep/Cobas TaqMan HBV test. Samples from 397 patients from the state of São Paulo were analysed by all three methods. Fifty-two samples were from patients who were human immunodeficiency virus and hepatitis C virus positive, but HBV negative. Genotypes were characterised, and the viral load was measure in each sample. The in-house rtPCR showed an excellent success rate compared with commercial tests; inter-assay and intra-assay coefficients correlated with commercial tests (r = 0.96 and r = 0.913, p < 0.001) and the in-house test showed no genotype-dependent differences in detection and quantification rates. The in-house assay tested in this study could be used for screening and quantifying HBV DNA in order to monitor patients during therapy.     

Is Poverty Driving Borana Herders in Southern Ethiopia to Crop Cultivation?

This study addresses whether or not crop cultivation by Borana herders in southern Ethiopia is motivated by poverty since 80% of the households belong to poor wealth classes (i.e., poor, very poor and destitute). Yet our findings showed little evidence that Borana communities have become self-sufficient in grain production. Compared to wealthy households, poor households generally cultivated the least land and sampled households, producing yields only 31% of the Ethiopian national average. Grain per capita met only 26% of the annual requirement per person, equivalent to three to four months of self-sufficiency per household. The livelihood response model (LRM) developed for testing the relationship between extent of croplands and household wealth showed that poverty alone cannot be motivating herders to cultivate crops. Factors such as shortage of labor, lack of sufficient traction animals, and unreliable rainfall also need to be considered. Crop cultivation has not enabled self-sufficiency, but it has resulted in fragmented grazing lands. Future policies address changes in land use, including improving soil fertility through manure-nutrient transfers, by promoting better integration of crop cultivation and pastoralism. Research is needed to (a) understand household time allocation between crop cultivation and livestock management, (b) improve the LRM by considering temporal variability in the wealth of households and extent of cultivated lands, and (c) understand the role of poverty in motivating the adoption of alternative livelihood coping strategies.     

Involvement of the 3’ Untranslated Region in Encapsidation of the Hepatitis C Virus

Although information regarding morphogenesis of the hepatitis C virus (HCV) is accumulating, the mechanism(s) by which the HCV genome encapsidated remains unknown. In the present study, in cell cultures producing HCV, the molecular ratios of 3’ end- to 5’ end-regions of the viral RNA population in the culture medium were markedly higher than those in the cells, and the ratio was highest in the virion-rich fraction. The interaction of the 3’ untranslated region (UTR) with Core in vitro was stronger than that of the interaction of other stable RNA structure elements across the HCV genome. A foreign gene flanked by the 3’ UTR was encapsidated by supplying both viral NS3-NS5B proteins and Core-NS2 in trans. Mutations within the conserved stem-loops of the 3’ UTR were observed to dramatically diminish packaging efficiency, suggesting that the conserved apical motifs of the 3´ X region are important for HCV genome packaging. This study provides evidence of selective packaging of the HCV genome into viral particles and identified that the 3’ UTR acts as a cis-acting element for encapsidation.     

Late Quaternary variation of lignin composition in core MD01-2421 off central Japan, NW Pacific

In order to understand the responses of terrestrial vegetation in central Japan to global climate changes, we have generated the record of lignin composition from Core MD01-2421 off central Japan in the NW Pacific during the last 145,000 years by tetramethylammonium hydroxide (TMAH)-pyrolysis-gas chromatography-mass spectrometry (GC/MS). The relative abundance of lignin was significantly low in early MIS-1 and MIS-5e and higher in MIS-5c to early MIS-4. This reflects glacial-interglacial changes in sea level and riverine runoff. The ratio of syringyl (S)- to vanillyl (V)-phenols (S / V ratio), which is a contribution index of angiosperms against gymnosperms, was lower in MIS-2, MIS-4 and MIS-6, reflecting the glacial-interglacial variation of air temperature. The ratio of cinnamyl (C)- to vanillyl (V)-phenols (C / V ratio), which indicates the contribution of grasses, was higher in late MIS-2, early-mid MIS-3 and MIS-6. The periods of higher C / V ratio correspond to the periods of lower sea surface temperatures (SSTs), suggesting a dry and cold climate in late MIS-2, mid-MIS-3 and MIS-6.     

Effect of route of administration in the micronucleus test with potassium bromate

The effect of intraperitoneal injection (i.p.) versus oral gavage administration (p.o.) of potassium bromate was examined using the micronucleus test in 2 strains of male mice (MS/Ae and CD-1). First, a small acute toxicity test and a pilot micronucleus experiment were performed to determine the appropriate dose range and sampling time for the full-scale micronucleus test. The full-scale test was carried out using doses of 18.8, 37.5, 75, and 150 mg/kg in the i.p. test and of 37.5, 75, 150, and 300 mg/kg in the p.o. test. The sampling time was 24 h for both mouse strains. Potassium bromate induced micronucleated polychromatic erythrocytes (MNPCEs) dose-dependently by both routes of administration in both mouse strains. No distinct difference in route of administration was observed in the test with MS/Ae mice. In CD-1 mice more MNPCEs were induced by the i.p. route than by the p.o. route.     

Isolation of furanoterpene-containing particles from Ceratocystis fimbriata-infected sweet potato root tissue

Furanoterpene-containing particles were isolated by centrifugation on a discontinuous Ficoll density gradient from a homogenate of the non-infected tissue adjacent to the infected region of Ceratocystis fimbriata-infected sweet potato root tissue. The particles were recovered at a relatively high ratio in the 2% Ficoll fraction, in which there was no contamination by mitochondria and only little by endoplasmic reticulum judging from the distribution of the activities of their marker enzymes and electron micrographs. Each particle was enveloped in a single membrane, 7-10 nm thick.