Metabolic Basis for the Self-Referential Genetic Code

An investigation of the biosynthesis pathways producing glycine and serine was necessary to clarify an apparent inconsistency between the self-referential model (SRM) for the formation of the genetic code and the model of coevolution of encodings and of amino acid biosynthesis routes. According to the SRM proposal, glycine was the first amino acid encoded, followed by serine. The coevolution model does not state precisely which the first encodings were, only presenting a list of about ten early assignments including the derivation of glycine from serine—this being derived from the glycolysis intermediate glycerate, which reverses the order proposed by the self-referential model. Our search identified the glycine-serine pathway of syntheses based on one-carbon sources, involving activities of the glycine decarboxylase complex and its associated serine hydroxymethyltransferase, which is consistent with the order proposed by the self-referential model and supports its rationale for the origin of the genetic code: protein synthesis was developed inside an early metabolic system, serving the function of a sink of amino acids; the first peptides were glycine-rich and fit for the function of building the early ribonucleoproteins; glycine consumption in proteins drove the fixation of the glycine-serine pathway.     

Lectinomics I. Relevance of exogenous plant lectins in biomedical diagnostics

This review focuses on utilization of plant lectins as medical diagnostic reagents and tools. The lectin-related diagnostic is aimed at detection of several diseases connected to alteration of the glycosylation profiles of cells and at identification of microbial and viral agents in clinical microbiology. Certain lectins, proposed for or used as diagnostic tools could even recognize those cellular determinants, which are not detected by available antibodies. Broad information is presented on the lectinomics field, illustrating that lectin diagnostics might become practical alternative to antibody-based diagnostic products. In addition, the rising trend of lectin utilization in biomedical diagnostics might initiate a development of innovative methods based on better analytical technologies. Lectin microarray, a rapid and simple methodology, can be viewed as an example for such initiative. This technology could provide simple and efficient screening tools for analysis of glycosylation patterns in biological samples (cellular extracts, tissues and the whole cells), allowing thus personalized detection of changes associated with carbohydrate-related diseases.     

Evaluation of Bacillus thuringiensis as a biocide of blackfly larvae (Diptera: Simuliidae)

Thirteen strains of Bacillus thuringiensis were bioassayed against late-instar larvae of field-collected Simulium vittatum. All 13 strains caused significant blackfly mortality. The mortalities ranged from 64% for the HD 225 strain to 88% for HD 39 at 10 ppm for a 24-hr exposure period. A minimum 24 hr of exposure to a minimum concentration of 10 ppm was required to produce mortalities approximating 90%. The LC₅₀ values for the HD 39 and HD 225 strains were 1.1 and 1.0 ppm, respectively.     

Field manipulations of tidal flushing,light exposure and natant macrofauna in a Louisiana salt marsh: Effects on the meiofauna

Field manipulative experiments were used to investigate some of the potential regulating factors of the meiofauna of a Louisiana salt marsh. Effects of various combinations of marsh grass clipping, exclusion of natant macrofauna, and tidal flushing on nematode, polychaete, and copepod density, as well as copepod species composition, were determined. Edaphic chlorophyll a was measured simultaneously. Grass clipping consistently affected the meiobenthic copepod assemblage; diversity and evenness dropped by Day 29 when Nitocra lacustris (Schmankevitsch) became dominant. Nematode density relative to controls was lower by Day 29 in clipped plots. N. lacustris abundance increased relative to controls in clipped plots enclosed by a solid Plexiglas box. Nematode density was negatively correlated with chlorophyll a content. No simple explanation of these patterns is possible; concomitant changes in microflora coupled with associated changes in the physical/biological environment of meiofauna must be responsible. Exclusion of only natant macrofauna (fish, shrimp, crabs) had no influence on meiofauna contrary to findings in other marshes. Dense grass cover and short, irregular tidal inundation may normally restrict intertidal grazing in Louisiana marshes.     

Effect of abdominal vagotomy of the pregnant rat on LH and progesterone concentrations and fetal resorption

Abdominal vagotomy on Day 8 of pregnancy in rats decreased the number of live fetuses at Day 16 and increased the number of resorbing fetuses. The activity of delta5-3beta-hydroxysteroid dehydrogenase (3beta-HSD) in the corpus luteum and interstitial gland, LH and progesterone values in plasma and progesterone values in ovarian tissue were all lower in vagotomized rats than in sham-operated controls. Ovarian PGF levels were not affected. We suggest that these effects were caused by a direct effect of vagotomy on LH secretion which in turn lowers 3beta-HSD activity and progesterone levels in ovarian tissue and plasma, leading to fetal resorption.     

An immune response profile model for immunogenicity quantitation

We propose an analytical model, which can simultaneously depict many fundamental characteristics of the immunogenicity of various vaccines. This model, the Immune Response (IR) profile, conveniently expresses the mathematical relation between pre- and post-vaccination titers. A vaccine's IR profile is antigen-specific, dose-dependent and post-vaccination interval-dependent. The maximal capability for serological response to a vaccine can be determined using this model irrespective of the dose administered, the post-vaccination assay interval, or the live or killed state of the vaccine. The IR profile obtained from analysis of booster vaccine responses in a limited number of seropositive study subjects can be used to predict maximal antibody titers which are expected after vaccination and can predict the geometric mean post-vaccination antibody titer of a cohort of subjects undergoing primary immunization. Using this model, it is anticipated that the immunoregulation implied by the IR profile may also prove to be correlated with cellular subpopulations and idiotypic antibody functions. Although derived from influenza vaccines analyses, the model successfully describes immune response characteristics following natural infection with malaria and following diphtheria and rubella vaccine administration.