Looking for compensation at multiple scales in a wetland bird community

Compensatory dynamics, during which community composition shifts despite a near‐constant total community size, are usually rare: Synchronous dynamics prevail in natural communities. This is a puzzle for ecologists, because of the key role of compensation in explaining the relation between biodiversity and ecosystem functioning. However, most studies so far have considered compensation in either plants or planktonic organisms, so that evidence for the generality of such synchrony is limited. Here, we extend analyses of community‐level synchrony to wetland birds. We analyze a 35‐year monthly survey of a community where we suspected that compensation might occur due to potential competition and changes in water levels, favoring birds with different habitat preferences. We perform both year‐to‐year analyses by season, using a compensation/synchrony index, and multiscale analyses using a wavelet‐based measure, which allows for both scale‐ and time‐dependence. We analyze synchrony both within and between guilds, with guilds defined either as tightknit phylogenetic groups or as larger functional groups. We find that abundance and biomass compensation are rare, likely due to the synchronizing influence of climate (and other drivers) on birds, even after considering several temporal scales of covariation (during either cold or warm seasons, above or below the annual scale). Negative covariation in abundance at the guild or community level did only appear at the scale of a few months or several years. We also found that synchrony varies with taxonomic and functional scale: The rare cases where compensation appeared consistently in year‐to‐year analyses were between rather than within functional groups. Our results suggest that abundance compensation may have more potential to emerge between broad functional groups rather than between species, and at relatively long temporal scales (multiple years for vertebrates), above that of the dominant synchronizing driver.     

Identification of a two-component regulatory system involved in antimicrobial peptide resistance in Streptococcus pneumoniae

Two-component regulatory systems (TCS) are among the most widespread mechanisms that bacteria use to sense and respond to environmental changes. In the human pathogen Streptococcus pneumoniae, a total of 13 TCS have been identified and many of them have been linked to pathogenicity. Notably, TCS01 strongly contributes to pneumococcal virulence in several infection models. However, it remains one of the least studied TCS in pneumococci and its functional role is still unclear. In this study, we demonstrate that TCS01 cooperates with a BceAB-type ABC transporter to sense and induce resistance to structurally-unrelated antimicrobial peptides of bacterial origin that all target undecaprenyl-pyrophosphate or lipid II, which are essential precursors of cell wall biosynthesis. Even though tcs01 and bceAB genes do not locate in the same gene cluster, disruption of either of them equally sensitized the bacterium to the same set of antimicrobial peptides. We show that the key function of TCS01 is to upregulate the expression of the transporter, while the latter appears the main actor in resistance. Electrophoretic mobility shift assays further demonstrated that the response regulator of TCS01 binds to the promoter region of the bceAB genes, implying a direct control of these genes. The BceAB transporter was overexpressed and purified from E. coli. After reconstitution in liposomes, it displayed substantial ATPase and GTPase activities that were stimulated by antimicrobial peptides to which it confers resistance to, revealing new functional features of a BceAB-type transporter. Altogether, this inducible defense mechanism likely contributes to the survival of the opportunistic microorganism in the human host, in which competition among commensal microorganisms is a key determinant for effective host colonization and invasive path.     

Prevalence and incidence of young onset dementia and associations with comorbidities: A study of data from the French national health data system

BackgroundDementia onset in those aged <65 years (young onset dementia, YOD) has dramatic individual and societal consequences. In the context of population aging, data on YOD are of major importance to anticipate needs for planning and allocation of health and social resources. Few studies have provided precise frequency estimates of YOD. The aim of this study is to provide YOD prevalence and incidence estimates in France and to study the contribution of comorbidities to YOD incidence.Methods and findingsUsing data from the French national health data system (Système National des Données de Santé, SNDS) for 76% of the French population aged 40 to 64 years in 2016 (n = 16,665,795), we identified all persons with dementia based on at least 1 of 3 criteria: anti-Alzheimer drugs claims, hospitalization with the International Classification of Diseases-10th Revision (ICD-10) dementia codes (F00 to F03, G30, G31.0, G31.1, or F05.1), or registration for free healthcare for dementia. We estimated prevalence rate (PR) and incidence rate (IR) and estimated the association of comorbidities with incident YOD. Sex differences were investigated. We identified 18,466 (PR_standardized = 109.7/100,000) and 4,074 incident (IR_standardized = 24.4/100,000 person-years) persons with prevalent and incident YOD, respectively. PR and IR sharply increased with age. Age-adjusted PR and IR were 33% (95% confidence interval (CI) = 29 to 37) and 39% (95% CI = 31 to 48) higher in men than women (p < 0.001 both for PR and IR). Cardio- and cerebrovascular, neurological, psychiatric diseases, and traumatic brain injury prevalence were associated with incident YOD (age- and sex-adjusted p-values <0.001 for all comorbidities examined, except p = 0.109 for antihypertensive drug therapy). Adjustment for all comorbidities explained more than 55% of the sex difference in YOD incidence. The lack of information regarding dementia subtypes is the main limitation of this study.ConclusionsWe estimated that there were approximately 24,000 and approximately 5,300 persons with prevalent and incident YOD, respectively, in France in 2016. The higher YOD frequency in men may be partly explained by higher prevalence of cardiovascular and neurovascular diseases, substance abuse disorders, and traumatic brain injury and warrants further investigation.

In an observational study, Laure Carcaillon-Bentata and colleagues investigate the prevalence and incidence of dementia onset among adults younger than 65 years of age using data from the French national health data system from 2016.     

1H, 13C, and 15N resonance assignment of the C103S mutant of the N-terminal domain of DsbD from Neisseria meningitidis

We report the nearly complete ¹H, ¹³C, and ¹⁵N resonance assignments of the C103S mutant of the N-terminal domain of DsbD from Neisseria meningitides. Secondary structure determination using CSI method leads to the prediction of nine β-sheet parts.     

Maternal deprivation affects the neuromuscular protein profile of the rat colon in response to an acute stressor later in life

Early life stress as neonatal maternal deprivation (MD) predisposes rats to alter gut functions in response to acute psychological stressors in adulthood, mimicking features of irritable bowel syndrome (IBS). We applied proteomics to investigate whether MD permanently changes the protein profile of the external colonic neuromuscular layer that may condition the molecular response to an acute stressor later in life.

Male rat pups were separated 3 h/day from their mothers during the perinatal period and further submitted to water avoidance (WA) stress during adulthood. Proteins were extracted from the myenteric plexus-longitudinal muscle of control (C), WA and MD + WA rat colon, separated on 2D gels, and identified by mass spectrometry. MD amplified the WA-induced protein changes involved in muscle contractile function, suggesting that stress accumulation along life imbalances the muscle tone towards hypercontractility. Our results also propose a stress dependent regulation of gluconeogenesis. Secretogranin II – the secretoneurin precursor – was induced by MD. The presence of secretoneurin in myenteric ganglia may partially explain the stress-mediated modulation of gastrointestinal motility and/or mucosal inflammation previously described in MD rats.

In conclusion, our findings suggest that neonatal stress alters the responses to acute stress in adulthood in intestinal smooth muscle and enteric neurons.     

La toxicité rénale du lithium: une réévaluation

Lithium salts are a well-established prophylactic treatment of relapses in bipolar disorder. Their most common renal side-effect is nephrogenic diabetes insipidus leading to polyuria. Only recently has their undesirable effect on renal function been recognized. This effect is due to the development of renal tubulo-interstitial lesions. The rate of progression is slow, with an annual loss of glomerular filtration estimated to be 2.2 ml/min. End-stage renal disease has been reported in some patients. In France, a recent survey showed that 0.2% of dialysed patients had lithium-induced renal disease. This complication occurs in a small percentage of lithium-treated patients, after 1 or 2 decades of treatment. However, its exact prevalence in the long-term is unknown. Lithium-treated patients should be regularly monitored. This monitoring should include annual measurements of serum creatinine and estimated creatinine clearance, as well as measurements of serum calcium (because hyperparathyroidism may develop). In early renal toxicity, discontinuation of lithium should be discussed with the patient by both the treating psychiatrist and the nephrologist.     

From microsatellites to single nucleotide polymorphisms for the genetic monitoring of a critically endangered sturgeon

The use of genetic information is crucial in conservation programs for the establishment of breeding plans and for the evaluation of restocking success. Short tandem repeats (STRs) have been the most widely used molecular markers in such programs, but next‐generation sequencing approaches have prompted the transition to genome‐wide markers such as single nucleotide polymorphisms (SNPs). Until now, most sturgeon species have been monitored using STRs. The low diversity found in the critically endangered European sturgeon (Acipenser sturio), however, makes its future genetic monitoring challenging, and the current resolution needs to be increased. Here, we describe the discovery of a highly informative set of 79 SNPs using double‐digest restriction‐associated DNA (ddRAD) sequencing and its validation by genotyping using the MassARRAY system. Comparing with STRs, the SNP panel proved to be highly efficient and reproducible, allowing for more accurate parentage and kinship assignments' on 192 juveniles of known pedigree and 40 wild‐born adults. We explore the effectiveness of both markers to estimated relatedness and inbreeding, using simulated and empirical datasets. Interestingly, we found significant correlations between STRs and SNPs at individual heterozygosity and inbreeding that give support to a reasonable representation of whole genome diversity for both markers. These results are useful for the conservation program of A. sturio in building a comprehensive studbook, which will optimize conservation strategies. This approach also proves suitable for other case studies in which highly discriminatory genetic markers are needed to assess parentage and kinship.     

Formation of the head-trunk boundary in the animal body plan: an evolutionary perspective

Gene expression analyses and anatomical studies suggest that the body plans of protostomes and deuterostomes are phylogenetically related. In the central nervous system (CNS), arthropods and vertebrates (as well as their closest related phyla the urochordates and cephalochordates) share a nerve cord with rostral specification: the cerebral neuromeres in Drosophila, cerebral sensory vesicle of ascidians and lancelets and the large brain of craniates. Homologous genes, in particular of the otd/Otx and Hox families, are at play in these species to specify the anterior and posterior CNS territories, respectively. In contrast, homologies in the establishment of boundary regions like those separating head and trunk structures in arthropods or mid- and hindbrain domains in chordates are still unclear. We compare in these species the formation, properties and molecular characteristics of these boundaries during embryonic development. We also discuss recent findings suggesting that insects and vertebrates might have co-opted factors of related families to control the formation of these boundary regions, the evolution of which would then appear dramatically different from that of the anterior and posterior CNS domains.