Determination of 3-(5-cyclopropyl-1,2,4-oxadiazol-3-yl)-5-(1-methylethyl)imidazo[1,5-a]quinoxalin-4(5H)-one in serum by high-performance liquid chromatography

A high-performance liquid chromatographic assay with solid-phase extraction (SPE) for the rapid and sensitive quantitation of 3-(5-cyclopropyl-1,2,4-oxadiazol-3-yl)-5-(1-methylethyl)imidazo[1,5-a]quinoxalin-4(5H)-one (I, U-78875) in serum is described. The validation results indicated that the present method had excellent intra- and inter-assay precision (≤ 9.5%, mean ± S.D. = 3.9±3.0%, n = 25) and accuracy (≤ 10.0%, mean ± S.D. = 3.0 ± 2.9%, n = 25), as well as improved sensitivity (2 ng/ml, using a 100-μl injection). Each chromatographic run is only 10 min and the organic solvent for the extraction of I and internal standard (U-82217) from serum was only 300 μl. The application results obtained from the SPE method were in good agreement with the advanced automated sample preparation method.     

基于蛋白质二级结构热稳定性的正交方法

对蛋白质热稳定性的研究是解析蛋白高级结构,开发蛋白功能及新药物研发过程中的一个重要环节,是对其结构分析的一个重要关切点.观测蛋白质的圆二色光谱随温度程序变化而改变是研究其热稳定性的常用手段,传统的实验方法为选用某一单波长作为测试点,通过连续升温测试蛋白在单波长下的圆二色变温曲线,然后拟合出Tm值,此方法所得的信息有限,...     

粪肠球菌精氨酸脱亚胺酶酶学性质研究

经硫酸铵分级沉淀、Q-Sepharose Fast Flow阴离子交换层析、SephadexG-75凝胶柱层析从NJ402自溶细胞超声破碎液中提纯得到精氨酸脱亚胺酶(ADI),纯化倍数为34.5,活力回收率为31.4%,经SDS-PAGE以及Native-PAGE测定结果表明,ADI亚基分子量约为46 kD,该酶非变性情况下的分子量约为190 kD左右,该酶为同四聚体结构.酶学,胜质研究结果表明:ADI催化最适温度和最适pH分别为50℃和6.5,在45℃以下和pH 5～8之间有很好的稳定性.ADI是L-型脱亚胺酶,具有严格的光学选择性,适当浓度的Mn2 、Mg2 、Co2 对ADI催化活力的促进作用较大,高浓度的Zn2 和Co2 对酶有一定程度的抑制作用,L-瓜氨酸对酶无抑制作用而L-鸟氨酸却表现出较强的抑制作用.ADI在最佳催化条件下作用于L-精氨酸的米氏常数为3.2686 mmol/L,最大反应速度为2.44 μmol/min.     

若尔盖沙化土地治理土壤微生物群落与功能基因比较研究

【目的】在高寒沙地中建立以赖草和沙生苔草等先锋植物为主的人工草方格,探究其土壤微生物群落动态变化以及养分循环过程。【方法】采用宏基因组测序和qPCR方法进行土壤微生物群落结构组成分析、功能基因注释和绝对丰度测定,并结合土壤理化因子数据进行冗余分析。【结果】人工建立草方格后,沙地土壤中全氮、速效磷以及有机碳含量分别提高了20%-68%、10%-247%、19%-56%;细菌和真菌的群落数量分别提高了17%-81%和2%-95%,与植物促生长相关的鞘氨醇单胞菌属(Sphingomonas)、慢生根瘤菌属(Bradyrhizobium)、硝化螺旋菌属(Nitrospira)、Solirubrobacter属和类诺卡氏菌属(Nocardioides)等细菌种类的相对丰度呈上升趋势;氮循环中与氨氧化和亚硝酸盐氧化相关的amoCAB基因簇和nxrAB基因簇显著富集,发现了完全氨氧化的基因标志。【结论】人工建立草方格有效提升了高寒沙地土壤养分和微生物群落数量,促进了养分循环。适度放牧可以增加沙地生态系统的氮汇扩散性,有助于本土先锋植物定植,为今后在同等高海拔地区采取沙地生态修复措施提供理论参考。     

生物启发的细菌表面人造矿物壳:通过仿生矿化保护活细胞

【目的】生物启发的细菌表面仿生矿化人造矿物壳被用于保护活细胞。【方法】将细菌限制在坚固而完整的矿物壳中,有限的物理空间和物质交换使其暂时进行休眠,降低长期保存期间的活力损失以及提高在各种极端环境中的生存能力,并且能够通过酸去除矿物壳而重新激活细菌。【结果】相较于未仿生矿化的细菌(EcN),矿化细菌(EcN@CaCO₃)在32 d的储存实验中活力最高提升262倍;在pH 2.5的强酸环境中存活率提高837倍;在pH 12.0的强碱环境中存活率提高171倍;在80 ℃的高温条件下存活率提高59.1倍;甚至在抗生素溶液中,EcN@CaCO₃中细菌的存活率是EcN的729.7倍。【结论】本研究利用仿生矿化提高了细菌的保存稳定性,使其能在酸刺激下去除涂层恢复活性,也能在极端环境下保留细菌的活力,为微生物在环境生态、食品制造和生物医药等领域的应用提供研究基础。     

Direct adenylation from 5′-OH-terminated oligonucleotides by a fusion enzyme containing Pfu RNA ligase and T4 polynucleotide kinase

5′-Adenylated oligonucleotides (AppOligos) are widely used for single-stranded DNA/RNA ligation in next-generation sequencing (NGS) applications such as microRNA (miRNA) profiling. The ligation between an AppOligo adapter and target molecules (such as miRNA) no longer requires ATP, thereby minimizing potential self-ligations and simplifying library preparation procedures. AppOligos can be produced by chemical synthesis or enzymatic modification. However, adenylation via chemical synthesis is inefficient and expensive, while enzymatic modification requires pre-phosphorylated substrate and additional purification. Here we cloned and characterized the Pfu RNA ligase encoded by the PF0353 gene in the hyperthermophilic archaea Pyrococcus furiosus. We further engineered fusion enzymes containing both Pfu RNA ligase and T4 polynucleotide kinase. One fusion enzyme, 8H-AP, was thermostable and can directly catalyze 5′-OH-terminated DNA substrates to adenylated products. The newly discovered Pfu RNA ligase and the engineered fusion enzyme may be useful tools for applications using AppOligos.     

南极生物粪对汞的生物放大作用

首次报道了南极地区金图企鹅、阿德利企鹅、黑背鸥和巨海燕 4种海鸟 ,以及象海豹、威德尔海豹、毛皮海狮等 3种海豹新鲜粪便中的全 Hg含量 ,并对比了该区风化土壤的 Hg含量 ,其中 Hg含量水平依次为 :土壤背景值 <黑背鸥粪 <金图企鹅粪 <阿德利企鹅粪 <威德尔海豹粪 <象海豹粪 <巨海燕粪 <毛皮海狮粪 ,可见 ,相对于背景土壤生物粪明显富集 Hg元素。此外 ,结合上述粪便样品的 δ15 N测定结果 ,讨论了南极生物粪对 Hg的生物放大作用。研究表明 ,随着 δ15 N升高 ,即生物营养级的升高 ,其粪便的全 Hg含量有逐步增高的趋势 ,这证实了生物粪和生物肌体一样存在对 Hg的生物放大作用。文中还对南极阿德雷岛一个经过企鹅粪污染的 Y2湖泥芯剖面上 15个样品的 2 6种元素进行了聚类分析 ,结果表明 ,沉积物中的汞和企鹅粪的标型元素具有同源性 ,即沉积物中的汞主要是由企鹅粪带入的 ,由于生物粪对汞的生物富集作用 ,生物粪的混入会造成湖泊沉积物中汞含量的增高     

Age‐related memory vulnerability to interfering stimuli is caused by gradual loss of MAPK‐dependent protection in Drosophila

Age‐related memory impairment (AMI) is a common phenomenon across species. Vulnerability to interfering stimuli has been proposed to be an important cause of AMI. However, the molecular mechanisms underlying this vulnerability‐related AMI remain unknown. Here we show that learning‐activated MAPK signals are gradually lost with age, leading to vulnerability‐related AMI in Drosophila. Young flies (2‐ or 3‐day‐old) exhibited a significant increase in phosphorylated MAPK levels within 15 min after learning, whereas aged flies (25‐day‐old) did not. Compared to 3‐day‐old flies, significant 1 h memory impairments were observed in 15‐, 20‐, and 30‐day‐old flies, but not in 10‐day‐old flies. However, with post‐learning interfering stimuli such as cooling or electric stimuli, 10‐day‐old flies had worse memory performance at 1 h than 3‐day‐old flies, showing a premature AMI phenomenon. Increasing learning‐activated MAPK signals through acute transgene expression in mushroom body (MB) neurons restored physiological trace of 1 h memory in a pair of MB output neurons in aged flies. Decreasing such signals in young flies mimicked the impairment of 1 h memory trace in aged flies. Restoring learning‐activated MAPK signals in MB neurons in aged flies significantly suppressed AMI even with interfering stimuli. Thus, our data suggest that age‐related loss of learning‐activated neuronal MAPK signals causes memory vulnerability to interfering stimuli, thereby leading to AMI.