Reliability of an injury scoring system for horses

Background

The risk of injuries is of major concern when keeping horses in groups and there is a need for a system to record external injuries in a standardised and simple way. The objective of this study, therefore, was to develop and validate a system for injury recording in horses and to test its reliability and feasibility under field conditions.

Methods

Injuries were classified into five categories according to severity. The scoring system was tested for intra- and inter-observer agreement as well as agreement with a 'golden standard' (diagnosis established by a veterinarian). The scoring was done by 43 agricultural students who classified 40 photographs presented to them twice in a random order, 10 days apart. Attribute agreement analysis was performed using Kendall's coefficient of concordance (Kendall's W), Kendall's correlation coefficient (Kendall's τ) and Fleiss' kappa. The system was also tested on a sample of 100 horses kept in groups where injury location was recorded as well.

Results

Intra-observer agreement showed Kendall's W ranging from 0.94 to 0.99 and 86% of observers had kappa values above 0.66 (substantial agreement). Inter-observer agreement had an overall Kendall's W of 0.91 and the mean kappa value was 0.59 (moderate). Agreement for all observers versus the 'golden standard' had Kendall's τ of 0.88 and the mean kappa value was 0.66 (substantial). The system was easy to use for trained persons under field conditions. Injuries of the more serious categories were not found in the field trial.

Conclusion

The proposed injury scoring system is easy to learn and use also for people without a veterinary education, it shows high reliability, and it is clinically useful. The injury scoring system could be a valuable tool in future clinical and epidemiological studies.

     

Diffusion is capable of translating anisotropic apoptosis initiation into a homogeneous execution of cell death

Background  

Apoptosis is an essential cell death process throughout the entire life span of all metazoans and its deregulation in humans has been implicated in many proliferative and degenerative diseases. Mitochondrial outer membrane permeabilisation (MOMP) and activation of effector caspases are key processes during apoptosis signalling. MOMP can be subject to spatial coordination in human cancer cells, resulting in intracellular waves of cytochrome-c release. To investigate the consequences of these spatial anisotropies in mitochondrial permeabilisation on subsequent effector caspase activation, we devised a mathematical reaction-diffusion model building on a set of partial differential equations.     

Inter‐regional comparison of land‐use effects on stream metabolism

1. Rates of whole‐system metabolism (production and respiration) are fundamental indicators of ecosystem structure and function. Although first‐order, proximal controls are well understood, assessments of the interactions between proximal controls and distal controls, such as land use and geographic region, are lacking. Thus, the influence of land use on stream metabolism across geographic regions is unknown. Further, there is limited understanding of how land use may alter variability in ecosystem metabolism across regions. 2. Stream metabolism was measured in nine streams in each of eight regions (n = 72) across the United States and Puerto Rico. In each region, three streams were selected from a range of three land uses: agriculturally influenced, urban‐influenced, and reference streams. Stream metabolism was estimated from diel changes in dissolved oxygen concentrations in each stream reach with correction for reaeration and groundwater input. 3. Gross primary production (GPP) was highest in regions with little riparian vegetation (sagebrush steppe in Wyoming, desert shrub in Arizona/New Mexico) and lowest in forested regions (North Carolina, Oregon). In contrast, ecosystem respiration (ER) varied both within and among regions. Reference streams had significantly lower rates of GPP than urban or agriculturally influenced streams. 4. GPP was positively correlated with photosynthetically active radiation and autotrophic biomass. Multiple regression models compared using Akaike’s information criterion (AIC) indicated GPP increased with water column ammonium and the fraction of the catchment in urban and reference land‐use categories. Multiple regression models also identified velocity, temperature, nitrate, ammonium, dissolved organic carbon, GPP, coarse benthic organic matter, fine benthic organic matter and the fraction of all land‐use categories in the catchment as regulators of ER. 5. Structural equation modelling indicated significant distal as well as proximal control pathways including a direct effect of land‐use on GPP as well as SRP, DIN, and PAR effects on GPP; GPP effects on autotrophic biomass, organic matter, and ER; and organic matter effects on ER. 6. Overall, consideration of the data separated by land‐use categories showed reduced inter‐regional variability in rates of metabolism, indicating that the influence of agricultural and urban land use can obscure regional differences in stream metabolism.     

<Emphasis Type="Italic">TRAF1/C5</Emphasis>polymorphism is not associated with increased mortality in rheumatoid arthritis: two large longitudinal studies

Introduction  

Recently an association between a genetic variation in TRAF1/C5 and mortality from sepsis or cancer was found in rheumatoid arthritis (RA). The most prevalent cause of death, cardiovascular disease, may have been missed in that study, since patients were enrolled at an advanced disease stage. Therefore, we used an inception cohort of RA patients to investigate the association between TRAF1/C5 and cardiovascular mortality, and replicate the findings on all-cause mortality. As TRAF1/C5 associated mortality may not be restricted to RA, we also studied a large cohort of non-RA patients.     

The diversity of hemi-epiphytic figs (Ficus ; Moraceae) in a Bornean lowland rain forest

The diversity and niche specificity of hemi-epiphytic figs in a lowland dipterocarp forest in Sarawak were investigated in 1998. Twenty-seven fig species (264 individuals, c. 120 ha) colonized a diversity of host taxa (35 families), but densities were very low and only 1.77% of trees> 30 cm d.b.h. were occupied. There were no significant associations with host taxa or host-bark roughness but among 11 common species (≥9 individuals) the distributions of all other parameters (host-d.b.h., height and position of colonization, crown illumination, soil-texture and slope-angle) were significantly different, and we identified five fig guilds. The guilds corresponded to canopy strata, and appeared to reflect the establishment microsite requirements of different species. A fundamental trade-off within the hemi-epiphytic habit was revealed: Species colonizing larger hosts were rarer, because of lower host densities and more specific microsite requirements, but had better light environments and attained a larger maximum size. The single strangler species appeared to escape many of these constraints, and an important source of mortality caused by host-toppling, indicating the advantages of this strategy. Thus, the hemi-epiphytic figs in this community have come to fill a remarkable diversity of niches, despite low levels of competition, through the exigencies of a complex environment.  © 2003 The Linnean Society of London, Biological Journal of the Linnean Society , 2003, 78 , 439–455     

Morphology and somatometric growth of long-tailed macaques (Macaca fascicularis fascicularis) in Singapore

Crab-eating, or long-tailed, macaques [ Macaca fascicularis (Raffles, 1821)] have been studied extensively throughout their distribution in South and South-east Asia. Despite this extensive body of research, the island population of long-tailed macaques from Singapore remains virtually undescribed. In the present study, we compare the morphometric variability and patterns of growth observed in a population sample from Singapore with a composite sample from Thailand, north of the Isthmus of Kra. The results of our analyses indicate that there are statistically significant differences between the two populations in adult size and shape. For both males and females, the Singapore population is smaller than the Thai population. Relative to body length, the Singapore macaques exhibit significantly longer tails, and, relative to cranial length, they exhibit significantly more narrow faces than the Thai macaques. Although levels of sexual dimorphism for most morphometric traits are very similar, indicating similar levels of male–male competition for females, the Singapore males exhibit a significantly larger testicular volume relative to body weight, suggestive of an alternative male reproductive strategy. In addition to adult somatometric size and shape, comparisons of growth patterns relative to age and body size reveal significant differences between the two population samples. Combined, these results suggest either that statistically significant differences in adult morphology and patterns of growth can occur in presumably reproductively cohesive subspecies, or the Singapore macaques may be taxonomically distinct.  © 2007 The Linnean Society of London, Biological Journal of the Linnean Society , 2007, 92 , 675–694.     

Mist Net Effort Required to Inventory a Forest Bat Species Assemblage

Abstract: Little quantitative information exists about the survey effort necessary to inventory temperate bat species assemblages. We used a bootstrap resampling algorithm to estimate the number of mist net surveys required to capture individuals from 9 species at both study area and site levels using data collected in a forested watershed in northwestern California, USA, during 1996–2000. The mean number of simulated surveys required to capture individual species varied with species' rarity and ranged from 1.5 to 44.9. We retrospectively evaluated strategies to reduce required survey effort by subsampling data from 1996 to 1998 and tested the strategies in the field during 1999 and 2000. Using data from 1996 to 1998, the mean number of simulated surveys required to capture 8 out of 9 species was 26.3, but a 95% probability of capture required >61 surveys. Inventory efficiency, defined as the cumulative proportion of species detected per survey effort, improved for both the study area and individual sites by conducting surveys later in summer. We realized further improvements in study area inventory efficiency by focusing on productive sites. We found that 3 surveys conducted between 1 July and 10 September at each of 4 productive sites in this 10-km² study area resulted in the capture of 8 species annually. Quantitative estimation of the survey effort required to assess bat species occurrence improves the ability to plan and execute reliable, efficient inventories. Results from our study should be useful for planning inventories in nearby geographical areas and similar habitat types; further, the analytical methods we used to assess effort are broadly applicable to other survey methods and taxa.