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Contrasting levels of DNA polymorphism at the autosomal and X-linked visual color pigment loci in humans and squirrel monkeys 总被引:1,自引:0,他引:1
The X-linked color pigment (opsin) locus is known to be highly polymorphic
in the squirrel monkey and other New World monkeys. To see whether this is
also the case for the autosomal (blue) opsin locus, we obtained 32 squirrel
monkey and 30 human blue opsin gene sequences. No amino acid polymorphism
was found in either the squirrel monkey sample or the human sample,
contrary to the situation at the X-linked opsin locus. This sharp contrast
in the level of polymorphism might be due to differences in gene expression
between the autosomal and the X-linked loci. At the X-linked locus,
heterozygote advantage can occur because, owing to X-inactivation, the two
alleles in a heterozygote are expressed in different cone cells, producing
two types of cone cell, whereas at the autosomal locus, heterozygote
advantage cannot occur because the two alleles in a heterozygote are
expressed in the same cone cells, producing only one type of cone cell
(i.e., phenotypically a homozygote). From the sequence data, the levels of
nucleotide diversity (pi, i.e., the number of nucleotide differences per
site) are estimated: for the human sample, pi = 0.00% per nondegenerate
site, 0.00% per twofold degenerate site, and 0.04% per fourfold degenerate
site in the coding regions and 0.01% per site in intron 4; for the squirrel
monkey sample, pi = 0.00% per nondegenerate site, 0.00% per twofold
degenerate site, and 0.15% per fourfold degenerate site in the coding
regions and 0.17% per site in intron 4. The blue opsin genes from the
common and pygmy chimpanzees, the gorilla, the capuchin, and the howler
monkey were also sequenced. Features critical to the function of the opsin
are well conserved in all known mammalian sequences. However, the
interhelical loops are, on average, actually more conservative than the
transmembrane helical regions. In addition, these sequence data and those
from some other genes indicate that the common and pygmy chimpanzees are
not closely related, their divergence data being from one third to one half
the date of the human-chimpanzee divergence.
相似文献
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The M.ADP.P(i) state is required for helical order in the thick filaments of skeletal muscle 总被引:2,自引:2,他引:0
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S Xu J Gu T Rhodes B Belknap G Rosenbaum G Offer H White LC Yu 《Biophysical journal》1999,77(5):2665-2676
The thick filaments of mammalian and avian skeletal muscle fibers are disordered at low temperature, but become increasingly ordered into an helical structure as the temperature is raised. Wray and colleagues (Schlichting, I., and J. Wray. 1986. J. Muscle Res. Cell Motil. 7:79; Wray, J., R. S. Goody, and K. Holmes. 1986. Adv. Exp. Med. Biol. 226:49-59) interpreted the transition as reflecting a coupling between nucleotide state and global conformation with M.ATP (disordered) being favored at 0 degrees C and M.ADP.P(i) (ordered) at 20 degrees C. However, hitherto this has been limited to a qualitative correlation and the biochemical state of the myosin heads required to obtain the helical array has not been unequivocally identified. In the present study we have critically tested whether the helical arrangement of the myosin heads requires the M.ADP.P(i) state. X-ray diffraction patterns were recorded from skinned rabbit psoas muscle fiber bundles stretched to non-overlap to avoid complications due to interaction with actin. The effect of temperature on the intensities of the myosin-based layer lines and on the phosphate burst of myosin hydrolyzing ATP in solution were examined under closely matched conditions. The results showed that the fraction of myosin mass in the helix closely followed that of the fraction of myosin in the M.ADP.P(i) state. Similar results were found by using a series of nucleoside triphosphates, including CTP and GTP. In addition, fibers treated by N-phenylmaleimide (Barnett, V. A., A. Ehrlich, and M. Schoenberg. 1992. Biophys. J. 61:358-367) so that the myosin was exclusively in the M.ATP state revealed no helical order. Diffraction patterns from muscle fibers in nucleotide-free and in ADP-containing solutions did not show helical structure. All these confirmed that in the presence of nucleotides, the M.NDP.P(i) state is required for helical order. We also found that the spacing of the third meridional reflection of the thick filament is linked to the helical order. The spacing in the ordered M.NDP.P(i) state is 143.4 A, but in the disordered state, it is 144. 2 A. This may be explained by the different interference functions for the myosin heads and the thick filament backbone. 相似文献
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Although environmental factors are important, there is considerable evidence that genes also have a significant role in the
pathogenesis of obesity. We conducted a population-based study to investigate the relationship between candidate genes for
obesity (UCP1, UCP2, ADRA2B, ADRB3, LEPR, VDR and ESR1) and adiposity measures (body mass index, body fat percentage, weight, waist circumference and waist–hip ratio) in terms
of individual gene and gene × gene interaction in models unadjusted and adjusted for covariates (age, years since menopause,
educational level and total energy intake). Postmenopausal women with TC genotype of ESR1 gene had higher body fat percentage than those with TT genotype in the models unadjusted and adjusted for the covariates
(P = 0.006 in adjusted model). In multiple logistic regression analysis, BsmI and ApaI SNPs of VDR genes were significantly associated with overweight and obesity. The UCP2–VDR
ApaI interaction to susceptibility of overweight and obesity was first observed from logistic regression analysis, and then confirmed
in the multifactor dimensionality reduction method unadjusted and adjusted for the covariates. This interaction had 69.09%
prediction accuracy for overweight and obesity (P = 0.001, sign test). In conclusion, the study suggests the significant association of ESR1 and VDR genes with adiposity measures and the UCP2–VDR
ApaI interaction to susceptibility to being overweight and obesity in postmenopausal Vietnamese women. 相似文献
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A cDNA molecule encoding a major part of the human Norepinephrine transporter(hNET) was synthesized by means of Polymerase Chain Reaction(PCR) technique and used as a probe for selecting the human genomic NET gene.A positive clone harbouring the whole gene was obtained from a human lymphocyte genomic library through utilizing the “genomic walking” technique.The clone,designated as phNET,harbours a DNA fragment of about 59 kd in length inserted into BamH I site in cosmid pWE15.The genomic clone contains 14 exons encoding all amino acid residues in the protein.A single exon encodes a distinct transmembrane domain,except for transmembrane domain 10 and 11,which are encoded by part of two exons respectively,and exon 12,which encodes part of domain 11 and all of domain 12.These results imply that there is a close relationship between exon splicing of a gene and structureal domains of the protein,as is the case for the human γ-aminobutyric acid transporter(hGAT) and a number of other membrane proteins. 相似文献
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Differential Cell Cohesiveness Expressed by Prespore and Prestalk Cells of Dictyostelium discoideum 总被引:1,自引:0,他引:1
T. Y. LAM G. PICKERING J. GELTOSKY C. H. SIU 《Differentiation; research in biological diversity》1981,20(1-3):22-28
Pseudoplasmodia of Dictyostelium discoideum at the culmination stage were separated into two cell populations by sedimentation in a discontinuous renografin gradient. The two lighter fractions (I and II) had enzymatic activities characteristic of the anterior prestalk cells, while the heaviest fraction (III) showed enzyme activities characteristic of the posterior prespore cells. Cell-cell adhesion among prespore cells is much more resistant to EDTA dissociation than 10-h cells and prestalk cells. Fab fragments prepared from antibodies directed against a specific cell surface glycoprotein gp150 were more effective in dissociating prespore cells than prestalk cells. In addition, prespore cells contained an approximately 2-fold higher concentration of the endogenous carbohydrate binding protein discoidin-I than prestalk cells. These differences may account for the differential cohesiveness of these two cell populations and provide a basis for cell recognition and cell sorting at the slug stage. 相似文献
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A cDNA encoding the mouse GABA transporter has been isolated and sequenced.The results show that the mouse GABA transporter cDNA differs from that of the rat by 60 base pairs at the open reading frame region but the deduced amino acid sequences of the two cDNAs are identical and both composed of 599 amino acids.However,the amino acid sequence is different from the sequence deduced from a recently published mouse GABA transporter cDNA. 相似文献