Mixture models for analysis of melting temperature data

Background  

In addition to their use in detecting undesired real-time PCR products, melting temperatures are useful for detecting variations in the desired target sequences. Methodological improvements in recent years allow the generation of high-resolution melting-temperature (T_m) data. However, there is currently no convention on how to statistically analyze such high-resolution T_m data.     

基于网络药理学的谷糠结合态多酚抗乳腺癌机制研究

本研究旨在探讨谷糠结合态多酚(bound phenol of inner shell,BPIS)发挥抗乳腺癌细胞活性的作用机制。首先采用细胞计数法检测BPIS对乳腺癌细胞以及正常乳腺细胞活性的影响;然后综合运用SEA、SIB以及GeneCards等数据库获得BPIS和乳腺癌的相关靶点,并分析活性成分与作用靶点的互作网络以及通路。本研究筛选得到BPIS抗乳腺癌相关靶点39个,主要涉及糖脂代谢和细胞自噬等生物过程以及MAPK、PI3K/AKT、FoxO等多条信号通,表明BPIS抗乳腺癌是多成分、多靶点、多通路协同作用的过程,而与细胞死亡相关的细胞自噬很可能在BPIS抑制乳腺癌过程中发挥主要作用。     

New epidemiological features on animal trypanosomiasis by molecular analysis in the pastoral zone of Sideradougou, Burkina Faso

A multidisciplinary work was undertaken in the agropastoral zone of Sidéradougou, Burkina Faso to try to elucidate the key factors determining the presence of tsetse flies. In this study the PCR was used to characterize trypanosomes infecting the vector ( Glossina tachinoides and Glossina palpalis gambiensis ) and the host, i.e. cattle. A 2-year survey involved dissecting 2211 tsetse of the two Glossina species. A total of 298 parasitologically infected tsetse were analysed by PCR. Trypanosoma vivax was the most frequently identified trypanosome followed by the savannah type of T. congolense and, to a lesser extent, the riverine forest type of T. congolense , and by T. brucei . No cases of T. simiae were found. From the 107 identified infections in cattle, the taxa were the same, but T. congolense savannah type was more frequent, whereas T. vivax and T. congolense riverine forest types were found less frequently. A correlation was found between midgut infection rates of tsetse, nonidentified infections and reptile bloodmeals. These rates were higher in G.p. gambiensis , and in the western part of the study area. T. vivax infections were related to cattle bloodmeals, and were more frequent in G. tachinoides and in the eastern study area. The PCR results combined with bloodmeal analysis helped us to establish the relationships between the vector and the host, to assess the trypanosome challenge in the two parts of the area, to elucidate the differences between the two types of T. congolense , and to suspect that most midgut infections were originating from reptilian trypanosomes.     

Oxygen consumption-based evaluation of fungal activity

A novel oxygen-based microplate assay for studying fungal activity is described. Fungal activity results in a change of oxygen concentration in CVC-96 plates^® and thus produces a signal that enables continuous monitoring of fungal activity. In this study the oxygen consumption was different for three tested fungi, Fusarium oxysporum f. sp. lycopersici, Verticillium dahliae and Trichoderma longibrachiatum. The assay described is a highly sensitive and reliable method for monitoring fungal activity. This assay does not interfere with fungal development and there is no need to kill the cells to take a measurement. This test would be useful for studying reactions that consume oxygen so possible applications of this test could be physiological studies, testing of fungicidal or fungistatic compounds, and studying enzyme reactions. The system provides a valuable insight into the kinetics of fungal activity and is suitable to test other systems.     

Positive and negative effects of herbivory on the population dynamics of Senecio jacobaea L. and Cynoglossum officinale L.

Summary Herbivore effects were studied on populations of the biennial plant species Senecio jacobaea and Cynoglossum officinale. During a three year period (1985–1988) population characteristics (herbivory, number of seedlings, rosettes and flowering plants) were compared in-and outside exclosures, as well as parameters reflecting vegetation cover. In S. jacobaea, a strong negative effect of Tyria jacobaeae was found on seedling establishment, rosette growth and flowering. On the other hand, vertebrate herbivores (mainly rabbits) had an indirect positive effect by limiting the development of the surrounding vegetation (esp. grasses). The increasing vegetation cover in protected populations caused a reduction in germination, seedling- and rosette-growth. Herbivory on C. officinale was low (<10%), no direct effects of herbivores on plant populations were shown. Indirect effects of herbivory through an increasing vegetation were even more pronounced as in S. jacobaea. Therefore, although both plant species may first benefit from herbivore-exclusion, their populations are dependent on rabbits eating other plants (esp. grasses) and reducing competition.Publication of the Meijendel comité, New Series no. 108     

Fruit morphology in Tragopogon L. (Compositae: Lactuceae) from the Iberian Peninsula

Achenes of all the Tragopogon species from the Iberian Peninsula were examined by means of scanning-electron microscopy and stereomicroscopy. The achenes of the eight species are described, illustrated and compared. The results are contrasted with the systematics of this genus. The isolated position of T. lamottei with regard to the other seven species is noted. A key is provided to enable the different species to be distinguished.