Synthesis,molecular docking,ADME study,and antimicrobial potency of piperazine based cinnamic acid bearing coumarin moieties as a DNA gyrase inhibitor

A series of novel piperazine based cinnamic acid bearing coumarin derivatives were designed and synthesized by piperazine based cinnamic acids esterification with 4-hydroxycoumarin and characterized by various spectral techniques like infrared, ¹H nuclear magnetic resonance (NMR), ¹³C NMR, and mass. The novel bioactive compounds (7a-7m) screen their potential against different bacterial and fungal strains. Compound 7g (minimum inhibitory concentration [MIC] = 12.5 µg/ml) exhibited potent antibacterial activity against Escherichia coli strain. Compounds 7d, 7f, 7g, 7k, 7l , and 7m showed potent antibacterial activity against all bacterial strains. Compounds 7a, 7g, 7h, 7k, 7l , and 7m exhibited potent antifungal activity against all fungal strains. Furthermore, a molecular docking study revealed that compounds 7d, 7f, 7g , and 7k could bind to the active site of E. coli DNA gyrase subunit B protein and form hydrogen bonding with crucial amino acid residues Arg136 in the active sites. Comprehensively, our study recommends that 7d, 7f, 7g , and 7k could be a promising lead for developing more efficient antimicrobial drug candidates and DNA gyrase inhibitors.     

A fast approach to identify trending articles in hot topics from XML based big bibliographic datasets

Nowadays XML based big bibliographic datasets are common in different domains which provide meta data about articles published in that domain. They have well defined tags which give details of the year, title, authors, abstract, keywords, the type of article, the venue of publishing the article and other such specific details about each article. A lot of statistics can be extracted from this dataset. Most of the time the tag pertaining to domain sub topic information associated with the article will be absent in the dataset as it is not an article attribute. Hence for such statistics articles must be mapped to its associated sub domain. This paper investigates this problem and proposes a fast approach to find trending articles and hot topics from XML based big bibliographic datasets. The proposed framework uses domain ontology to first classify articles into its sub topics. Fast detection of hot topics, trending keywords and articles is achieved using novel Map Reduce algorithms implemented on a hadoop distributed framework. Performance comparison demonstrates that it outperforms its non-Map Reduce counterpart in quickly sorting out the trending keywords and titles in a particular hot topic from XML based bibliographic dataset.     

Seasonal Adreno-Cortical Cycle of a Nocturnal Bird, Indian Spotted Owlet Athene brama: Biochemical and Morphological Observations

It is well reported that the environmental factors along with different endocrine stimulus play a crucial role in maintenance of adrenocortical activity in birds. This study is first to report a detailed seasonal activity cycle of adrenal cortex, particu-larly its secretory physiology in a tropical nocturnal bird, Indian spotted owlet Athene brama . The maximum cortical activity having highest glandular mass, glandular free cholesterol, esterified cholesterol profiles, and peak level of corticosterone in plasma coincided with the long day length, highest temperature and increasing amplitude of relative humidity and rainfall of the early summer month, May. Cortical activity declined to minimum level in August when the ecofactors also declined parallely and hence, the birds entered into partial hibernation. The cortical activity progressed slowly throughout the winter (September-March) to reach maximum level in May. Further, the electron microscopic observations of cortical cell morphology strongly supported the above seasonal activity status of the gland revealing a comparatively large number of mitochondria during May than August, along with lipid filled vacuoles during May but not in August. Besides, assessment of gonadal and pineal hormones in relation with seasonal activity of adrenal cortex presented a parallel relationship with gonad while completely inverse relationship with pineal. Therefore, the study concludes that the seasonal adrenocortical activity of this tropical nocturnal bird might be regulated by multiple factors, particularly by the environmental temperature, humidity/rainfall and photoperiod along with the internal factors at least by gonadal and pineal hormones.     

Exocytosis by vesicle crumpling maintains apical membrane homeostasis during exocrine secretion

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Honeybee nutrition and pollen substitutes: A review

Like other invertebrates, honey bees too are poikilothermic animals; they cannot regulate their body temperature and they have to undergo a period of inactivation when atmospheric temperature is un-tolerable. During this period, their nutritional requirements and metabolic activities are minimized due to highly restricted foraging activities. The egg-laying by queen and rearing of unsealed and sealed brood are decreased, however their extent is governed by the quantum of stored food available. The problems of deleterious influence of adverse weather conditions and non-availability of bee flora all round the year, in a particular locality, have been realized by the researchers/beekeepers and migration concept has been developed to solve this problem. But again, migration itself is not an easy task. The provision of artificial feeding as an alternate of migration. Scientists all over the world have formulated different artificial food recepies for bees on the basis of nutrient composition of honey and pollen, acceptability, palatability, digestibility and affordability of ingredients. This may help to maintain all colony parameters enough to derive maximum advantage of forthcoming floral rich season. However, a standard balanced diet for commercial beekeeping that is accepted worldwide is still awaited.     

Intracellular amorphous Ca-carbonate and magnetite biomineralization by a magnetotactic bacterium affiliated to the Alphaproteobacteria

Bacteria synthesize a wide range of intracellular submicrometer-sized inorganic precipitates of diverse chemical compositions and structures, called biominerals. Their occurrences, functions and ultrastructures are not yet fully described despite great advances in our knowledge of microbial diversity. Here, we report bacteria inhabiting the sediments and water column of the permanently stratified ferruginous Lake Pavin, that have the peculiarity to biomineralize both intracellular magnetic particles and calcium carbonate granules. Based on an ultrastructural characterization using transmission electron microscopy (TEM) and synchrotron-based scanning transmission X-ray microscopy (STXM), we showed that the calcium carbonate granules are amorphous and contained within membrane-delimited vesicles. Single-cell sorting, correlative fluorescent in situ hybridization (FISH), scanning electron microscopy (SEM) and molecular typing of populations inhabiting sediments affiliated these bacteria to a new genus of the Alphaproteobacteria. The partially assembled genome sequence of a representative isolate revealed an atypical structure of the magnetosome gene cluster while geochemical analyses indicate that calcium carbonate production is an active process that costs energy to the cell to maintain an environment suitable for their formation. This discovery further expands the diversity of organisms capable of intracellular Ca-carbonate biomineralization. If the role of such biomineralization is still unclear, cell behaviour suggests that it may participate to cell motility in aquatic habitats as magnetite biomineralization does.Subject terms: Phylogenetics, Biodiversity, Biogeochemistry, Water microbiology