TORC1 and TORC2 work together to regulate ribosomal protein S6 phosphorylation in Saccharomyces cerevisiae

Nutrient-sensitive phosphorylation of the S6 protein of the 40S subunit of the eukaryote ribosome is highly conserved. However, despite four decades of research, the functional consequences of this modification remain unknown. Revisiting this enigma in Saccharomyces cerevisiae, we found that the regulation of Rps6 phosphorylation on Ser-232 and Ser-233 is mediated by both TOR complex 1 (TORC1) and TORC2. TORC1 regulates phosphorylation of both sites via the poorly characterized AGC-family kinase Ypk3 and the PP1 phosphatase Glc7, whereas TORC2 regulates phosphorylation of only the N-terminal phosphosite via Ypk1. Cells expressing a nonphosphorylatable variant of Rps6 display a reduced growth rate and a 40S biogenesis defect, but these phenotypes are not observed in cells in which Rps6 kinase activity is compromised. Furthermore, using polysome profiling and ribosome profiling, we failed to uncover a role of Rps6 phosphorylation in either global translation or translation of individual mRNAs. Taking the results together, this work depicts the signaling cascades orchestrating Rps6 phosphorylation in budding yeast, challenges the notion that Rps6 phosphorylation plays a role in translation, and demonstrates that observations made with Rps6 knock-ins must be interpreted cautiously.     

Assessment of heavy metal in the water,sediment, and two edible fish species of Jamshedpur Urban Agglomeration,India with special emphasis on human health risk

The city of Jamshedpur, nicknamed the “industrial capital of Jharkhand,” is one of the oldest industrial settlements in India, nestled amidst the mineral-rich Chota Nagpur plateau, with its diverse tribal population. Heavy metal contamination from industrialization and urbanization can pose a serious health risk to the resident population of the city. Metal concentrations in water and sediment of various water bodies (rivers, canals, and lakes) were determined using ICP-MS. Pollution indices indicate heavy metal contamination at Jamshedpur Urban Agglomeration, mainly because of Cr (23–1111.6 mg/kg), Hg (0.08–4.11 mg/kg), and Pb (5.2–248 mg/kg). Labeo rohita and Punitus sarara, the two popular edible fishes, also have high concentration of Cr, Hg, and Pb. Health risk to human population due to consumption of metal contaminated edible fishes (L. rohita and P. sarara) was determined by target hazard quotient (THQ) and hazard index (HI). THQ value of fish consumption (most popular protein supplement in the area) was found higher for Cr and Pb when compared with previous literature on fish consumption. Also, HI value ranged from 1.4 to 3.9, suggesting that the children have higher health risks than adults, due to consumption of metal contaminated fishes (especially L. rohita).     

Context-dependent memory: colour versus odour

An olfactory stimulus and a visual stimulus were employed in a context- dependent memory study using a prose passage as the to-be-remembered item. Ninety-five university students (aged 17-35 years) learned the passage of prose in the presence of one of the stimuli and were then asked to recall the passage with the original context either reinstated or not reinstated. The results revealed a significant context-dependent memory effect for the olfactory cue but not for the visual cue. They demonstrate support for the effectiveness of odours as context cues and it is suggested that context-dependent memory processes may underlie the formation and retrieval of odour-evoked autobiographical memories.      

Improvement of small seed for big nutritional feed

Exploding global population, rapid urbanization, salinization of soils, decreasing arable land availability, groundwater resources, and dynamic climatic conditions pose impending damage to our food security by reducing the grain quality and quantity. This issue is further compounded in arid and semi-arid regions due to the shortage of irrigation water and erratic rainfalls. Millets are gluten (a family of proteins)-free and cultivated all over the globe for human consumption, fuel, feed, and fodder. They provide nutritional security for the under- and malnourished. With the deployment of strategies like foliar spray, traditional/marker-assisted breeding, identification of candidate genes for the translocation of important minerals, and genome-editing technologies, it is now tenable to biofortify important millets. Since the bioavailability of iron and zinc has been proven in human trials, the challenge is to make such grains accessible. This review encompasses nutritional benefits, progress made, challenges being encountered, and prospects of enriching millet crops with essential minerals.     

Immunomodulation by 'Immuplus (AquaImmu)' in giant freshwater prawn, Macrobrachium rosenbergii (De Man)

ImmuPlus, a polyherbal commercial formulation was used to modulate the immune system of commercially important giant freshwater prawn M. rosenbergii. The prawns were fed with basal diet supplemented with ImmuPlus at 1g/kg feed for 4 weeks. Results showed that the phenoloxidase activity (PO), haemagglutination and lysozyme activities were significantly elevated in ImmuPlus-fed prawn up to 3 weeks of feeding and declined after 4 weeks of feeding. The total protein level in ImmuPlus-fed prawn raised up to 2nd week of feeding. Incorporation of ImmuPlus at the rate of 1g/kg feed in the diet of prawn for 3 weeks may be beneficial in raising the immune status of prawn.     

Detection and identification of phytoplasma associated with witches’ broom and little leaf disease in Arundo donax: first report from India

During the survey of two successive years 2012–2013, in nearby places of Gorakhpur districts, Uttar Pradesh, India, Arundo donax plants were found to be exhibiting witches’ broom, excessive branching accompanied with little leaf symptoms with considerable disease incidence. Nested PCR carried out with universal primers pair R16F2n/R16R2 employing the PCR (P1/P7) product as a template DNA (1:20) resulted in expected size positive amplification ~1.2 kb in all symptom-bearing plants suggested the association of phytoplasma with witches’ broom disease of Narkat plants. BLASTn analysis of the 16S rRNA gene sequence showed the highest (99%) sequence identity with Candidatus phytoplasma asteris (16SrI group). In phylogenetic analysis, the sequence data showed close relationships with the members of 16SrI phytoplasma and clustered within a single clade of 16SrI group and closed to B subgroup representatives. This is a first report of 16Sr I-B group phytoplasma associated with witches’ broom accompanied with little leaf disease of Narkat in India.     

Histological and histochemical studies of the male reproductive system of Ligia exotica Roux (Crustacea: Isopoda)

The male reproductive system of Ligia exotica consists of a pair of testes, a pair of vasa deferentia and a pair of genital pores. The testes are tube-like, unpigmented and translucent and each is composed of three elongate, fusiform follicles. The follicular lumen of the mature testis contains spermatogonia, spermatocytes, spermatids and spermatozoa. The histochemical reactions of the testis and the vas deferens show the presence of acidic sulphated mucopolysaccharides and neutral mucopolysaccharides. In addition, they contain basic proteins, tyrosine, disulphide groups, SH-groups, SH-groups, lipids, phospholipids, RNA and DNA.