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121.
Jon Bohlin Lars Snipen Axel Cloeckaert Karin Lagesen David Ussery Anja B Kristoffersen Jacques Godfroid 《BMC evolutionary biology》2010,10(1):249
Background
Classification of bacteria within the genus Brucella has been difficult due in part to considerable genomic homogeneity between the different species and biovars, in spite of clear differences in phenotypes. Therefore, many different methods have been used to assess Brucella taxonomy. In the current work, we examine 32 sequenced genomes from genus Brucella representing the six classical species, as well as more recently described species, using bioinformatical methods. Comparisons were made at the level of genomic DNA using oligonucleotide based methods (Markov chain based genomic signatures, genomic codon and amino acid frequencies based comparisons) and proteomes (all-against-all BLAST protein comparisons and pan-genomic analyses). 相似文献122.
Matthew W Blair Sharon JB Knewtson Carolina Astudillo Chee-Ming Li Andrea C Fernandez Michael A Grusak 《BMC plant biology》2010,10(1):215
Background
Iron deficiency anemia is a global problem which often affects women and children of developing countries. Strategy I plants, such as common bean (Phaseolus vulgaris L.) take up iron through a process that involves an iron reduction mechanism in their roots; this reduction is required to convert ferric iron to ferrous iron. Root absorbed iron is critical for the iron nutrition of the plant, and for the delivery of iron to the shoot and ultimately the seeds. The objectives of this study were to determine the variability and inheritance for iron reductase activity in a range of genotypes and in a low × high seed iron cross (DOR364 × G19833), to identify quantitative trait loci (QTL) for this trait, and to assess possible associations with seed iron levels. 相似文献123.
Kristoffersen L Hallberg E Wallén R Anderbrant O 《Arthropod Structure & Development》2006,35(2):85-92
To investigate the morphological basis for olfactory reception in the carrot psyllid (Trioza apicalis) we used scanning and transmission electron microscopy. Our study reveals a very sparse sensillar setup. We identify and describe several different types of single-walled sensilla likely to have an olfactory function, as well as mechanosensory hairs and intracuticular sensilla. A T. apicalis antenna is about 0.6 mm long and has 10 segments. Apically on the flagellum there are two conspicuous multi-porous single-walled bristles. There are six cuticular cavities on the flagellum; two smaller on the apical flagellomere, and four larger located on the lateral side of the antenna on flagellomeres 2, 4, 6 and 7. Each cavity contains two sensilla and there are three varieties of cavity sensilla. Mechano- and chemosensory hairs appear in low numbers on all segments but the third. Carrot psyllids most likely use olfactory cues to locate their rather strongly smelling host plants, and we argue that the low number of olfactory sensilla found in this insect may accommodate high concentrations of odour stimuli. There is no sexual dimorphism in the sensillar setup. In concordance with this, no sex pheromones have been described in the Psylloidea so far. 相似文献
124.
Oliver Bühler Morten Ingerslev Simon Skov Erik Schou Iben Margrete Thomsen Christian Nørgaard Nielsen Palle Kristoffersen 《Plant and Soil》2017,413(1-2):29-44
Aims
The purpose of this study is to evaluate root and stem growth, nutrient status and soil properties of a tree planting in structural soil.Methods
Root and stem growth were measured at an 10-year-old urban planting of Tilia x europaea L. ‘Pallida’ established in structural soil on a paved square in Copenhagen, Denmark.Root abundance was quantified and soil profiles were established at three different distances from 10 trees (1.0, 1.9, and 2.9 m). Soil and leaf samples were analysed for nutrient concentrations.Results
Abundant root presence was measured across the entire profile of structural soil (160?×?60 cm) at all distances, provided that structural soil layers were constructed correctly. Erroneously constructed structural soil layers however, resulted in impaired tree and root growth. Coarse root morphology was affected by the confined growing space in the voids of the stone matrix. The soil was relatively alkaline with an average pH (CaCl2) of 7.3. Foliar analysis revealed deficiencies of K and Mn. These deficiencies might be due to a combined effect of high pH and low soil concentrations of these nutrients.Conclusions
The study documents that correctly constructed structural soils allow and encourage root growth in load bearing layers.125.
126.
The sequences of the linked alpha 2- and alpha 1-globin genes of the equine
BI and BII haplotypes are greater than 99% identical within a 1.2-kb region
extending from approximately 75 bp upstream of the putative cap site to a
point approximately 150 bp 3' to the poly A addition signal. Differences
between the alpha 2 and alpha 1 genes that are common to both haplotypes
indicate that a major gene conversion occurred approximately 12 Myr ago and
that this has been followed by shorter, more localized, conversions.
Interhaplotype (allelic) comparisons at the alpha loci suggest that the BI
and BII haplotypes have probably existed independently greater than or
equal to 0.5 Myr and that the alpha 1 genes may have undergone a recent
interchromosomal gene conversion.
相似文献
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129.
T.M. Wassenaar A. Fernández-Astorga R. Alonso V.T. Marteinsson S.H. Magnússon A.B. Kristoffersen M. Hofshagen 《Letters in applied microbiology》2009,49(3):388-395
Aims: The genetic diversity of Campylobacter isolated from human infection and from poultry was assessed in strains originating in three different European regions in order to compare these two hosts and to investigate European regional differences.
Methods and Results: Randomly chosen isolates originated from Norway, Iceland and Basque Country in Spain were genotyped by sequencing of the short variable region (SVR) of flaA . A total of 293 strains were investigated, c . 100 per country with half originated from either host. The results indicate extensive diversity in both hosts and identified differences in the nature and distribution of genotypes between the countries. These differences could in part be related to geographical location, in that Campylobacter genotypes from Iceland and Norway were more similar to each other than either was to Basque Country.
Conclusions: Differences between the countries exceeded the observed differences between human and poultry isolates within a country.
Significance and Impact of the Study: Regional differences are extensive and should not be ignored when comparing genotyping data originating from different international studies. 相似文献
Methods and Results: Randomly chosen isolates originated from Norway, Iceland and Basque Country in Spain were genotyped by sequencing of the short variable region (SVR) of flaA . A total of 293 strains were investigated, c . 100 per country with half originated from either host. The results indicate extensive diversity in both hosts and identified differences in the nature and distribution of genotypes between the countries. These differences could in part be related to geographical location, in that Campylobacter genotypes from Iceland and Norway were more similar to each other than either was to Basque Country.
Conclusions: Differences between the countries exceeded the observed differences between human and poultry isolates within a country.
Significance and Impact of the Study: Regional differences are extensive and should not be ignored when comparing genotyping data originating from different international studies. 相似文献
130.