AoP-LSE: Antioxidant Proteins Classification Using Deep Latent Space Encoding of Sequence Features

It is of utmost importance to develop a computational method for accurate prediction of antioxidants, as they play a vital role in the prevention of several diseases caused by oxidative stress. In this correspondence, we present an effective computational methodology based on the notion of deep latent space encoding. A deep neural network classifier fused with an auto-encoder learns class labels in a pruned latent space. This strategy has eliminated the need to separately develop classifier and the feature selection model, allowing the standalone model to effectively harness discriminating feature space and perform improved predictions. A thorough analytical study has been presented alongwith the PCA/tSNE visualization and PCA-GCNR scores to show the discriminating power of the proposed method. The proposed method showed a high MCC value of 0.43 and a balanced accuracy of 76.2%, which is superior to the existing models. The model has been evaluated on an independent dataset during which it outperformed the contemporary methods by correctly identifying the novel proteins with an accuracy of 95%.     

艾滋病合并侵袭性真菌感染35例临床分析

目的 分析艾滋病(AIDS)合并侵袭性真菌感染的发生情况及临床特点,为其诊治提供参考。方法 回顾性分析85例AIDS患者的临床资料,总结侵袭性真菌感染的发病情况及临床特点。结果 85例AIDS患者继发侵袭性真菌感染35例,感染率为41．2％,感染部位以消化道为主,占44．4％,致病菌以白念珠菌(白假丝酵母)为主,占57．4％,侵袭性真菌感染病例主要发生于CD4~+T淋巴细胞计数＜100个/μl的患者,占71．8％。35例患者中27例治愈,8例死亡。结论 侵袭性真菌感染是AIDS患者主要的机会性感染之一,其发生与CD4~+T淋巴细胞计数密切相关,临床上以消化道真菌感染多见,侵袭性真菌感染的病死率高。     

光学相干层析成像技术用于裸鼠皮肤霉菌感染研究

利用中心波长为850 nm的宽带光源SLD实现了纵向分辨率为8μm的光学相干层析成像系统。系统采用傅里叶域光学延迟线实现了深度扫描速度为160 mm/s,成像深度为3 mm。获得了裸鼠皮肤霉菌感染部位和健康皮肤的光学相干层析(optical coherence tom ography,OCT)图像,皮肤病变前后的内部结构信息清晰可见。     

Assessment of Water Pollution using Diatom Community Structure and Species Distribution — A Case Study in a Tropical River Basin

A study on biological assessment of water pollution using diatom community structure and species distribution was carried out in the Linggi River Basin, Malaysia which was polluted by various urban, industrial and agricultural wastes. A total of 86 diatom taxa belonging to 21 genera were recorded from all eight sampling stations located in the basin, of which 70 species were found on artificial substrates; the remaining 16 species were recorded exclusively on natural substrates. The number of diatom species observed between the stations varied from 22-47 species. The dominant diatom species in decreasing order of abundance were Eunotia vanheurckii, Nitzschia palea, Achnanthes saxonica, Gomphonema parvulum and Achnanthes minutissima. The most common clean water species were Achnanthes minutissima, A. linearis and Synedra rumpens. The most tolerant species were Nitzschia palea followed by Gomphonema parvulum and Pinnularia braunii. Eunotia vanheurckii and Navicula cryptocephala occurred in high densities at both unpolluted and polluted stations and can be considered as the common facultative or indifferent species. Although a large number of species were recorded at the unpolluted stations, equivalent number of species were also found at the moderately polluted stations. However, the number of species was reduced at grossly polluted stations. Nevertheless, a marked variation in species association exists between the unpolluted and polluted stations, but not among the polluted stations to distinguish the type and degree of pollution.     

燕山地区白头翁生境伴生植物资源调查与分析

调查与白头翁共存的伴生植物种类、相似性、生活型、分布区类型等,探讨其生态适应性和地理分布规律,针对性地提出白头翁资源保护利用建议,以期为燕山地区白头翁种质资源的保护和利用提供参考。采用访问调查、路线调查和典型样地调查法,对燕山地区白头翁生境伴生植物进行调查与分析。燕山地区从冀东的秦皇岛地区到冀北的承德地区都有白头翁的分布,多生于向阳的山地草坡上,喜光、耐旱、适于阳生性环境。白头翁生境伴生植物共56科128属164种,主要优势科为菊科（Compositae）、豆科（Leguminosae）、禾本科（Gramineae）、蔷薇科（Rosaceae）、唇形科（Labiatae）、百合科（Liliaceae）、毛茛科（Ranunculaceae）、萝藦科（Asclepiadaceae）等,其中乔木共5科5属7种,灌木共22科38属46种,草本植物共35科85属111种。调查的各样地间相似系数普遍较低,说明燕山地区不同地区白头翁生境差别较大,其伴生植物具有多样性的特点。伴生植物属的分布区类型可分为14个,群落具有明显温带性质。燕山地区白头翁生境多样性及伴生植物的多样性,反映出燕山地区白头翁生态适...     

沙颍河流域人为输入对水体水化学组成的影响

人类活动输入影响河流水体化学组成,增加经河流体系向海洋输出物质的通量,影响全球物质循环过程.有效识别人为输入的影响途径和范围对于量化人类活动对全球物质循环的影响具有重要作用.沙颍河是淮河上游最大支流,流域水体受人为输入影响严重,通过研究沙颍河流域强人为输入对河水水化学组成的影响过程,有利于弄清楚强烈人为活动干扰下河流输...     

连翘酯苷A通过Akt/Nrf2信号通路发挥抗脑缺血氧化损伤作用研究

目的:研究连翘酯苷A(Forsythiaside A,FA)对缺血再灌注引起的脑细胞损伤的保护作用及机制.方法:采用PC12细胞缺氧再复氧模型(OGD/R),细胞分组为正常组,模型组,FA处理组(1.25,2.5和5μmol/L),测定细胞存活率、凋亡率、ROS、MDA以及抗氧化酶水平.采用Western blotti...     

EL转染试剂转染食管鳞癌细胞的条件优化

该文探讨了关于EL转染试剂转染Hsa-miR-6743质粒至食管鳞癌细胞转染效果的影响因素.以食管鳞癌细胞株Eca-109、TE-1和Eca-9706为研究对象,GFP标记的Hsa-miR-6743为报告基因,通过倒置荧光显微镜检测荧光信号优化转染试剂和质粒比值.结果表明,食管鳞癌细胞的种类影响EL转染试剂的转染效果,...     

蚤雌雄同体畸形一例(昆虫纲:蚤目)

报道蚤雌雄同体畸形一例。