Do fences constrain predator movements on an evolutionary scale? Home range, food intake and movement patterns of large predators reintroduced to Addo Elephant National Park, South Africa

Fencing conservation areas is ubiquitous in South Africa, however, the impact of these on predator ecology has not been tested. We used relationships between prey abundance and predator space use to create equations to predict the home range size of lions Panthera leo and leopards Panthera pardus. We then successfully tested these predictions using published data (Phinda, Makalali) and home range estimates from radio collared individuals reintroduced to Addo Elephant National Park. Spotted hyaena Crocuta crocuta ranges also seem food dependent. Lion home ranges in Addo (114 ± 5 km²) required 180 fixes to be accurately estimated, spotted hyaena ranges (91 ± 10 km²) required 200 fixes, and the solitary leopard had 295 fixes for a range of 38 km². There were no sexual differences in home range sizes of lions or hyaenas. The daily food intake rate of lions, measured during continuous follows, was 9.8 kg per female equivalent unit. Dominant male lions (14.3 km for 8.3 kg) traveled furthest but obtained the least amount of food per day compared to subordinate males (8.9 km for 16.0 kg) and females (5.8 km for 17.9 kg). Subordinate males traveled the fastest and during the day, to avoid competition and harassment from the dominant males. From an evolutionary viewpoint, the use of fences for conservation has not affected the natural behaviour of the predators as they still conform to predictions derived from unfenced reserves; that is, prey abundance is the key factor in determining space use of large predators.     

Protandrous migration and variation in morphological characters in Emberiza buntings at an East Asian stopover site

The effect of the timing of spring migration on reproductive success differs between the sexes. As a consequence, various sex‐specific tactics relating to the timing of migration have evolved in migratory avian groups. Various hypotheses have been proposed to explain differential migration to breeding or wintering grounds, and inter‐ and intrasexual size differences are often considered one of the proximate mechanisms. We investigated arrival patterns in the spring by individuals of each sex, sexual size dimorphism and related morphological variables, and the relationship between size variation and arrival date in five bunting species that passed through an East Asian migratory flyway stopover site in 2006–08. Males of all the study species arrived before females, and significant sexual dimorphism was observed. Several morphological characters, including total length, wing‐length and tail‐length, contributed to the size variation. Although larger males arrived earlier, there was no relationship between arrival date and size in females. Our study confirmed that East Asian buntings display a discriminated protandrous migration pattern at the stopover site as well as at the breeding grounds. This is consistent with the view that larger body size in males is favoured due to its association with early arrival to help ensure access to the best resources and hence enhanced mating success.     

Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types

The root-rhizosphere interface of Populus is the nexus of a variety of associations between bacteria, fungi, and the host plant and an ideal model for studying interactions between plants and microorganisms. However, such studies have generally been confined to greenhouse and plantation systems. Here we analyze microbial communities from the root endophytic and rhizospheric habitats of Populus deltoides in mature natural trees from both upland and bottomland sites in central Tennessee. Community profiling utilized 454 pyrosequencing with separate primers targeting the V4 region for bacterial 16S rRNA and the D1/D2 region for fungal 28S rRNA genes. Rhizosphere bacteria were dominated by Acidobacteria (31%) and Alphaproteobacteria (30%), whereas most endophytes were from the Gammaproteobacteria (54%) as well as Alphaproteobacteria (23%). A single Pseudomonas-like operational taxonomic unit (OTU) accounted for 34% of endophytic bacterial sequences. Endophytic bacterial richness was also highly variable and 10-fold lower than in rhizosphere samples originating from the same roots. Fungal rhizosphere and endophyte samples had approximately equal amounts of the Pezizomycotina (40%), while the Agaricomycotina were more abundant in the rhizosphere (34%) than endosphere (17%). Both fungal and bacterial rhizosphere samples were highly clustered compared to the more variable endophyte samples in a UniFrac principal coordinates analysis, regardless of upland or bottomland site origin. Hierarchical clustering of OTU relative abundance patterns also showed that the most abundant bacterial and fungal OTUs tended to be dominant in either the endophyte or rhizosphere samples but not both. Together, these findings demonstrate that root endophytic communities are distinct assemblages rather than opportunistic subsets of the rhizosphere.     

Opportunistic feeding by lions: non-preferred prey comprise an important part of lion diets in a habitat where preferred prey are abundant

Optimal foraging theory predicts less diverse predator diets with a greater availability of preferred prey. This narrow diet niche should then be dominated by preferred prey, with implications for predator–prey dynamics and prey population ecology. We investigated lion (Panthera leo) diets in Hluhluwe–iMfolozi Park (HiP), South Africa, to assess whether lions in a site with a high density of preferred prey (prey species weighing 92–632 kg as estimated from a published meta-analysis) have a narrow diet, consisting primarily of preferred prey. HiP is a useful study site to investigate this prediction because it is a productive landscape (with a high density of prey) where lion-preferred prey constitutes up to 33% of the prey available to lions. Furthermore, to investigate whether lions in HiP exhibit sex-specific diets as documented in other southern African populations, we estimated male and female lion diets separately. We were specifically interested in testing whether traditional approaches of estimating lion diets at the population level mask sex-specific predation patterns, with possible implications for management of lions in small to medium-sized fenced reserves. Lions in HiP preferred larger prey species (63–684 kg) and had diets with a larger proportion of preferred prey than reported in an African-wide meta-analysis. However, despite the high density of preferred prey species, 36% of lion diets still consisted of typically non-preferred species such as nyala (Tragelaphus angasii). This finding suggests that lions in HiP maintain a degree of opportunism even when preferred prey are abundant. Therefore, abundant, non-preferred prey are likely to be an important resource for lion populations. Sex-specific differences in lion diets were evident in HiP, suggesting that estimation of lion resource use and carrying capacity should consider opportunistic hunting and sex-specific differences in lion diets.     

Preliminary studies of the impact of excreted N on cycling and uptake of N in pasture systems using natural abundance stable isotopic discrimination

The possibility of using natural abundance techniques to determine N transformations and flows after deposition of cattle dung has been examined. These preliminary results showed that ¹⁵N in dung was greater than in plants growing in association with particular pats. This, and other observational information, indicated that dung pats of different ages were being examined. There were significant variations in plant ¹⁵N signatures within and between species grown in association and away from the dung. It was probable that variation in plant ¹⁵N was brought about by changes in soil mineral N pools after transfer of N derived from the dung. This resulted in different ¹⁵N signatures in Trifolium repens (because of changes in N utilization from soil or atmospheric pools), in Lolium perenne (because of changes in ¹⁵N in soil mineral N), but not in Ranunculus repens (because the majority of active roots were outside the range of immediate influence of the deposited dung). The differences in ¹⁵N allowed the development of hypotheses for changes in soil N pools and the acquisition of N by plants from soil, dung or atmospheric sources.     

Prey preferences of the leopard (Panthera pardus)

Leopards Panthera pardus have a catholic diet and are generally thought to prey on medium-sized ungulates; however, knowledge on which species are actually preferred and avoided is lacking, along with an understanding of why such preferences arise. Twenty-nine published and four unpublished studies of leopard diet that had relative prey abundance estimates associated with them were analysed from 13 countries in 41 different spatial locations or temporal periods throughout the distribution of the leopard. A Jacobs' index value was calculated for each prey species in each study and the mean of these was then tested against a mean of 0 using t or sign tests for preference or avoidance. Leopards preferentially prey upon species within a weight range of 10–40 kg. Regression plots suggest that the most preferred mass of leopard prey is 25 kg, whereas the mean body mass of significantly preferred prey is 23 kg. Leopards prefer prey within this body mass range, which occur in small herds, in dense habitat and afford the hunter minimal risk of injury during capture. Consequently, impala, bushbuck and common duiker are significantly preferred, with chital likely to also be preferred with a larger sample size from Asian sites. Species outside the preferred weight range are generally avoided, as are species that are restricted to open vegetation or that have sufficient anti-predator strategies. The ratio of mean leopard body mass with that of their preferred prey is less than 1 and may be a reflection of their solitary hunting strategy. This model will allow us to predict the diet of leopards in areas where dietary information is lacking, also providing information to assist wildlife managers and conservation bodies on predator carrying capacity and predator–prey interactions.     

Social information, social feeding, and competition in group-living goats (Capra hircus)

There are both benefits (e.g., social information) and costs(e.g., intraspecific competition) for individuals foraging ingroups. To ascertain how group-foraging goats (Capra hircus)deal with these trade-offs, we asked 1) do goats use socialinformation to make foraging decisions and 2) how do they adjusttheir intake rate in light of having attracted by other groupmembers? To establish whether goats use social information,we recorded their initial choice of different quality food patcheswhen they were ignorant of patch quality and when they couldobserve others foraging. After determining that goats use socialinformation, we recorded intake rates while they fed alone andin the presence of potential competitors. Intake rate increasedas the number of competitors increased. Interestingly, lonegoats achieved an intake rate that was higher than when onecompetitor was present but similar to when two or more competitorswere present. Faster intake rates may allow herbivores to ingesta larger portion of the available food before competing groupmembers arrive at the patch. This however, does not explainthe high intake rates achieved when the goats were alone. Weprovide 2 potential explanations: 1) faster intake rates area response to greater risk incurred by lone individuals, theloss of social information, and the fear of being left behindby the group and 2) when foraging alone, intake rate is no longera trade-off between reducing competition and acquiring socialinformation. Thus, individuals are able to feed close to theirmaximum rate.     

Extremely low levels of genetic diversity in the terrestrial orchid Epipactis thunbergii (Orchidaceae) in South Korea: implications for conservation

Levels of allozyme variation, population genetic structure, and fine-scale genetic structure (FSGS) of the rare, both sexually and clonally reproducing terrestrial orchid Epipactis thunbergii were examined for eight ( N  = 734) populations in a 20 × 20-km area in South Korea. Twenty-three putative allozyme loci resolved from 15 enzyme systems were used. Extremely low levels of allozyme variation were found within populations: the mean frequency of polymorphic loci was 3.8% [isocitrate dehydrogenase ( Idh-2 ) with two alleles was polymorphic across populations], the mean number of alleles per locus was 1.04, and the mean expected heterozygosity was 0.013. The overall fixation index was not significantly different from zero ( F _IS = 0.069), although the species is self-compatible. However, a significantly high degree of population differentiation was found between populations at Idh-2 ( F _ST = 0.388) in the studied area. Furthermore, spatial autocorrelation analyses revealed a significant FSGS (up to 3 m) within populations. These observations suggest that the main explanatory factors for the extremely low levels of genetic diversity and the shaping of the population genetic structure of E. thunbergii are genetic drift as a result of a small effective population size, a restricted gene flow, and the isolation of populations. Considering the current genetic structure of E. thunbergii , three guidelines are suggested for the development of conservation strategies for the species in South Korea: (1) protection of habitats of standing populations; (2) prohibition by law of any collection of E. thunbergii ; and (3) protection of nearby pollinator populations, given the fact that fruit set in natural habitats is very low.  © 2007 The Linnean Society of London, Botanical Journal of the Linnean Society , 2007, 155 , 161–169.     

The players may change but the game remains: network analyses of ruminal microbiomes suggest taxonomic differences mask functional similarity

By mapping translated metagenomic reads to a microbial metabolic network, we show that ruminal ecosystems that are rather dissimilar in their taxonomy can be considerably more similar at the metabolic network level. Using a new network bi-partition approach for linking the microbial network to a bovine metabolic network, we observe that these ruminal metabolic networks exhibit properties consistent with distinct metabolic communities producing similar outputs from common inputs. For instance, the closer in network space that a microbial reaction is to a reaction found in the host, the lower will be the variability of its enzyme copy number across hosts. Similarly, these microbial enzymes that are nearby to host nodes are also higher in copy number than are more distant enzymes. Collectively, these results demonstrate a widely expected pattern that, to our knowledge, has not been explicitly demonstrated in microbial communities: namely that there can exist different community metabolic networks that have the same metabolic inputs and outputs but differ in their internal structure.