The effect of microhabitats on the leaf litter decomposition and on the distribution of soil animals

Earthworm burrows as microhabitats for other soil fauna were studied in a hornbeam-oak mixed forest in Hungary. Comparative chemical analysis and feeding experiments were carried out to find out whether the leaves in the burrows of large-bodied earthworms are more decomposed than those from the surrounding areas. The total organic matter content, the C/N ratio, the stability coefficient and the percentage of tannins and lipids indicate that the chemical breakdown of the litter material is more advanced in the burrows than on the other parts of the forest floor especially in autumn. No consistent differences were observed in the amounts of other organic components. Feeding experiments showed that three species of the fauna preferred the leaves pulled into the burrows to those from the surrounding areas and the preference was greater in autumn than in spring.
It is suggested that the high density of some soil animals in the burrows in autumn is due to the more palatable food there; in summer the microclimate of the burrows is favoured, whereas spring can be considered as a transition period.     

Distribution of the Eastern knapweed fritillary (Melitaea ornata Christoph, 1893) (Lepidoptera: Nymphalidae): past, present and future

Climatic change during the Quaternary resulted in periodical range restrictions and expansions in most temperate species. Although some repetitive patterns have been supported, it became obvious that species’ responses might be rather specific and may also depend on habitat preferences of the species in question. Distribution of Melitaea ornata, a little known fritillary species is analysed on different time scales using MaxEnt software. Using the results of genitalia morphometry and the predicted potential refugia during the Last Glacial Maximum (LGM), we reconstructed probable re-colonisation routes. We also predicted changes in the potential area for 2080. The present distribution fits well the known occurrence data except for the Iberian Peninsula and North-Africa where the species is missing. Based on our predictions, temperate areas seem to be less suitable for the species. We proposed two hypotheses to explain this pattern: a less probable recent extinction from Iberia and a more supported historical explanation. Predicted distribution during the LGM mainly fits to widely accepted refugia. Europe was probably re-colonised from two main sources, from the Apennine peninsula and from the Balkans which was probably connected to the Anatolian refugia. Populations of the Levant region and in the Elburs Mts. do not show any significant expansion. Further studies are necessary in the case of the predicted Central Asian refugia. Predictions for 2080 show a northward shift and some extinction events in the Mediterranean region. Core areas are identified which might have a potential for expansion including southern Russia, Hungary and possibly Provence in France. Predicted northward area shifts are only possible if the potential leading edge populations and habitats of the species can be preserved.     

Targeted Lipidomics in Drosophila melanogaster Identifies Novel 2-Monoacylglycerols and N-acyl Amides

Lipid metabolism is critical to coordinate organ development and physiology in response to tissue-autonomous signals and environmental cues. Changes to the availability and signaling of lipid mediators can limit competitiveness, adaptation to environmental stressors, and augment pathological processes. Two classes of lipids, the N-acyl amides and the 2-acyl glycerols, have emerged as important signaling molecules in a wide range of species with important signaling properties, though most of what is known about their cellular functions is from mammalian models. Therefore, expanding available knowledge on the repertoire of these lipids in invertebrates will provide additional avenues of research aimed at elucidating biosynthetic, metabolic, and signaling properties of these molecules. Drosophila melanogaster is a commonly used organism to study intercellular communication, including the functions of bioactive lipids. However, limited information is available on the molecular identity of lipids with putative biological activities in Drosophila. Here, we used a targeted lipidomics approach to identify putative signaling lipids in third instar Drosophila larvae, possessing particularly large lipid mass in their fat body. We identified 2-linoleoyl glycerol, 2-oleoyl glycerol, and 45 N-acyl amides in larval tissues, and validated our findings by the comparative analysis of Oregon-RS, Canton-S and w1118 strains. Data here suggest that Drosophila represent another model system to use for the study of 2-acyl glycerol and N-acyl amide signaling.     

Unexpected mode of action of sweet potato β-amylase on maltooligomer substrates

β-Amylase (EC 3.2.1.2), one of the main protein of the sweet potato, is an exo-working enzyme catalyzing the hydrolysis of α(1,4) glycosidic linkages in polysaccharides and removes successively maltose units from the non-reducing ends. The enzyme belongs to glycoside hydrolase GH14 family and inverts the anomeric configuration of the hydrolysis product. Multiple attack or processivity is an important property of polymer active enzymes and there is still limited information about the processivity of carbohydrate active enzymes. Action pattern and kinetic measurements of sweet potato β-amylase were made on a series of aromatic chromophor group-containing substrates (degree of polymerization DP 3-13) using HPLC method. Measured catalytic efficiencies increased with increasing DP of the substrates. Processive cleavage was observed on all substrates except the shortest pentamer. The mean number of steps without dissociation of enzyme–product complex increases with DP of substrate and reached 3.3 in case of CNPG11 indicating that processivity on longer substrates was more significant. A unique transglycosylation was observed on those substrates, which suffer processive cleavage and the substrates were re-built by the enzyme. Our results are the first presentation of a transglycosylation during an inverting glycosidase catalyzed hydrolysis. The yield of transglycosylation was remarkable high as shown in the change of the CNPG11 quantity. The CNPG11 concentration was doubled (from 0.24 to 0.54 mM) in the early phase of the reaction.     

Growth Medium-Dependent Glycine Incorporation into the Peptidoglycan of Caulobacter crescentus

The peptidoglycan (PG) is a macromolecular component of the bacterial cell wall that maintains the shape and integrity of the cell. The PG of Caulobacter crescentus, unlike that of many other Gram-negative bacteria, has repeatedly been shown to contain significant amounts of glycine. This compositional peculiarity has been deemed an intrinsic characteristic of this species. By performing a comprehensive qualitative and quantitative analysis of the C. crescentus PG by high-performance liquid chromatography (HPLC) and mass spectrometry (MS), we show here that glycine incorporation into the C. crescentus PG depends on the presence of exogenous glycine in the growth medium. High levels of glycine were detected at the fifth position of the peptide side chains of PG isolated from C. crescentus cells grown in the complex laboratory medium PYE or in defined medium (M2G) supplemented with casamino acids or glycine alone. In contrast, glycine incorporation was undetectable when cells were grown in M2G medium lacking glycine. Remarkably, glycine incorporation into C. crescentus peptidoglycan occurred even in the presence of low millimolar to sub-millimolar concentrations of free glycine. High glycine content in the PG had no obvious effects on growth rates, mode of PG incorporation or cell morphology. Hence, the C. crescentus PG is able to retain its physiological functions in cell growth and morphogenesis despite significant alterations in its composition, in what we deem to be unprecedented plasticity.     

Root capacitance measurements allow non-intrusive in-situ monitoring of the seasonal dynamics and drought response of root activity in two grassland species

Plant and Soil - Soil respiration (Rs) is a major pathway for carbon release to the atmosphere. We explored variability in dryland Rs response to rainfall pulses at multiple levels of spatial...