Influence of agricultural management form on the species structure of harvestman (Opiliones) communities

The paper is aimed at evaluation of the influence of two different agricultural management forms on harvestman (Opiliones) communities structure in relation to the optimization of land use on the model territory of Agricultural Cooperative (AC) Očová (Central Slovakia). The research was carried out using pitfall trapping through growing seasons from 2005 to 2007. Harvestmen were captured at four pairs of sites (8 sites in total). For each pair of sites the cultivation of the same crop with application of two different forms of agricultural management (conventional form and sustainable form with basic sustainable agro-environmental scheme) was characteristic. In total, 667 individuals of 8 species of the Phalangiidae family were captured during the research. The research results confirm the influence of management form on the structure of harvestman communities only partially. The obtained data indicate that the management form plays a significant role, especially in such agrocoenoses, in which the same crop is cultivated for several years (e.g., sites with alfalfa or permanent lawn), i.e., on the sites without ploughing or use of other similar agrotechnical measures. In these cases, the sites with the sustainable agro-environmental scheme showed higher diversity and equability of harvestman communities than the sites with the conventional form of agrotechnical management. Harvestman communities structure on sites with crop rotation and repeated ploughing was more influenced by additional factors than by the agricultural management form.     

Identifying drug targets for neurological and psychiatric disease via genetics and the brain transcriptome

Discovering drugs that efficiently treat brain diseases has been challenging. Genetic variants that modulate the expression of potential drug targets can be utilized to assess the efficacy of therapeutic interventions. We therefore employed Mendelian Randomization (MR) on gene expression measured in brain tissue to identify drug targets involved in neurological and psychiatric diseases. We conducted a two-sample MR using cis-acting brain-derived expression quantitative trait loci (eQTLs) from the Accelerating Medicines Partnership for Alzheimer’s Disease consortium (AMP-AD) and the CommonMind Consortium (CMC) meta-analysis study (n = 1,286) as genetic instruments to predict the effects of 7,137 genes on 12 neurological and psychiatric disorders. We conducted Bayesian colocalization analysis on the top MR findings (using P<6x10^-7 as evidence threshold, Bonferroni-corrected for 80,557 MR tests) to confirm sharing of the same causal variants between gene expression and trait in each genomic region. We then intersected the colocalized genes with known monogenic disease genes recorded in Online Mendelian Inheritance in Man (OMIM) and with genes annotated as drug targets in the Open Targets platform to identify promising drug targets. 80 eQTLs showed MR evidence of a causal effect, from which we prioritised 47 genes based on colocalization with the trait. We causally linked the expression of 23 genes with schizophrenia and a single gene each with anorexia, bipolar disorder and major depressive disorder within the psychiatric diseases and 9 genes with Alzheimer’s disease, 6 genes with Parkinson’s disease, 4 genes with multiple sclerosis and two genes with amyotrophic lateral sclerosis within the neurological diseases we tested. From these we identified five genes (ACE, GPNMB, KCNQ5, RERE and SUOX) as attractive drug targets that may warrant follow-up in functional studies and clinical trials, demonstrating the value of this study design for discovering drug targets in neuropsychiatric diseases.     

Jones matrix‐based speckle‐decorrelation angiography using polarization‐sensitive optical coherence tomography

We show that polarization‐sensitive optical coherence tomography angiography (PS‐OCTA) based on full Jones matrix assessment of speckle decorrelation offers improved contrast and depth of vessel imaging over conventional OCTA. We determine how best to combine the individual Jones matrix elements and compare the resulting image quality to that of a conventional OCT scanner by co‐locating and imaging the same skin locations with closely matched scanning setups. Vessel projection images from finger and forearm skin demonstrate the benefits of Jones matrix‐based PS‐OCTA. Our study provides a promising starting point and a useful reference for future pre‐clinical and clinical applications of Jones matrix‐based PS‐OCTA.     

Taxonomic affinities ofPhysena (Physenaceae) andAsteropeia (Theaceae)

Asteropeia andPhysena are both enigmatic woody dicotyledons from Madagascar. Various taxonomic affinities have been suggested for both genera, but no consensus has been reached. An analysis of rbcL sequence data strongly supports recognition of the sister-group relationship ofAsteropeia andPhysena and their placement as the sister group to Caryophyllales. Many similarities were noted betweenAsteropeia andPhysena for stem, wood, leaf, flower, pollen, and fruit characters. The most notable differences are found in the morphology of the flowers and the anatomy of the wood rays.