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31.
A T Karapetian P O Vardevanian M D Frank-Kamenetskii 《Journal of biomolecular structure & dynamics》1990,8(1):131-138
The enthalpy of helix-coil transition of DNA (delta H) is determined from the experiments on DNA melting with ligands by means of absolutely general formula, which contains only values directly known from the experiment (M.D. Frank-Kamenetskii, and A.T. Karapetian, Mol. Biol. USSR 6, 621 (1972)) with the combination of the "area" method (P.O. Vardevanian, et al., Biophysica 28, 130 (1983)). The experimentally obtained data show that delta H depends on both concentration of Na+ in solution and GC-content of DNA and is of high accuracy. 相似文献
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We present an efficient computational architecture designed using supervised machine learning model to predict amyloid fibril
forming protein segments, named AmylPepPred. The proposed prediction model is based on bio-physio-chemical properties of
primary sequences and auto-correlation function of their amino acid indices. AmylPepPred provides a user friendly web interface
for the researchers to easily observe the fibril forming and non-fibril forming hexmers in a given protein sequence. We expect that
this stratagem will be highly encouraging in discovering fibril forming regions in proteins thereby benefit in finding therapeutic
agents that specifically aim these sequences for the inhibition and cure of amyloid illnesses.
Availability
AmylPepPred is available freely for academic use at www.zoommicro.in/amylpeppred 相似文献34.
35.
Miller AF Padmakumar K Sorkin DL Karapetian A Vance CK 《Journal of inorganic biochemistry》2003,93(1-2):71-83
Fe-containing superoxide dismutase (FeSOD) and MnSOD are widely assumed to employ the same catalytic mechanism. However this has not been completely tested. In 1985, Bull and Fee showed that FeSOD took up a proton upon reduction [J. Am. Chem. Soc. 107 (1985) 3295]. We now demonstrate that MnSOD incorporates the same crucial coupling between electron transfer and proton transfer. The redox-coupled H(+) acceptor has been presumed to be the coordinated solvent molecule, in both FeSOD and MnSOD, however this is very difficult to test experimentally. We have now examined the most plausible alternative: that Tyr34 accepts a proton upon SOD reduction. We report specific incorporation of 13C in the C(zeta) positions of Tyr residues, assignment of the C(zeta) signal of Tyr34 in each of oxidized FeSOD and MnSOD, and direct NMR observations showing that in both cases, Tyr34 is in the neutral protonated state. Thus Tyr34 cannot accept a proton upon SOD reduction, and coordinated solvent is concluded to be the redox-coupled H(+) acceptor instead, in both FeSOD and MnSOD. We have also confirmed by direct 13C observation that the pK of 8.5 of reduced FeSOD corresponds to deprotonation of Tyr34. This work thus provides experimental proof of important commonalities between the detailed mechanisms of FeSOD and MnSOD. 相似文献
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The present-day studies in the field of systematics and phylogeny of microorganisms, fungi, in particular, are characterized by a wide use of new approaches and methods of molecular biology. The use of a diversity of genetic markers permits a distinct differentiation of closely related species into individual evolutionary independent lines. It is shown in this work that all Microbotryum violaceum s. l. isolates studied by us are divided into five evolutionary groups according to the host plant. 相似文献
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An inhibitor analysis was used for studying the tetrapyrrole role in the regulation of the expression of the nuclear gene encoding a low-molecular-weight protein, a stress plastid light-inducible protein ELIP. 2,2'-Dipyridyl and norflurazon were used as inhibitors. Experiments with dipyridyl demonstrated that tetrapyrroles were involved in the regulation of Elip gene expression, inhibiting it by approximately 50%. Similar results were obtained when there was photodestruction of the chloroplasts, caused by a plant treatment with norflurazon. The results confirm the involvement of the chloroplasts in the regulation of the nuclear gene expression coding for plastid proteins. Tetrapyrroles are important contributors to this process. 相似文献
40.
Oganesian NM Petrosian ShM Miridzhanian MI Asrian KV Pogosian AS Oganesian AN Abramian AK Arutiunian GR Karapetian AG Gevorkian EG Petrosian ZhG Arutiunian NK 《Radiatsionnaia biologiia, radioecologiia / Rossi?skaia akademiia nauk》2006,46(3):341-347
The aim of this work is the analysis of the indices of the health and of the structure of the sicknesses of the inhabitants of Armenia who took part in the liquidation of the consequences of the Chernobyl accident. Also it is the determination of possible dependence of the frequency of diseases for the most widespread classes of sicknesses on the received dose of the irradiation, according to the data of the clinical examination and dispensarysation; and also it is the revelation of the role of other factors influenced on the health indexes. 相似文献