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31.
Bamba S Andoh A Yasui H Makino J Kim S Fujiyama Y 《American journal of physiology. Gastrointestinal and liver physiology》2003,285(3):G529-G538
IL-11 inhibits the activation of NF-kappaB and induces the Th2 polarization of CD4+ T cells. The clinical utility of IL-11 is being investigated in Crohn's disease. However, physiological secretion of IL-11 in the intestine remains unclear. In this study, we investigated IL-11 secretion in human intestinal subepithelial myofibroblasts (SEMFs). Intestinal SEMFs were isolated from the human colonic mucosa. IL-11 secretion and mRNA expression were determined by ELISA and Northern blot analysis. The activating protein (AP)-1-DNA binding activity was evaluated by EMSA. IL-11 secretion was induced by IL-1beta and transforming growth factor (TGF)-beta1. These were also observed at the mRNA level. The EMSAs demonstrated that both IL-1beta and TGF-beta1 induced AP-1 activation within 2 h after stimulation, and a blockade of AP-1 activation by the recombinant adenovirus containing a dominant negative c-Jun markedly reduced the IL-1beta- and TGF-beta1-induced IL-11 mRNA expression. IL-1beta and TGF-beta1 induced an activation of ERK p42/44 and p38 MAP kinases, and the MAP kinase inhibitors (SB-202190, PD-98059, and U-0216) significantly reduced the IL-1beta- and TGF-beta1-induced IL-11 secretion. The upregulation of IL-11 mRNA by IL-1beta- and TGF-beta1 was also mediated by a p38 MAP kinase-mediated mRNA stabilization. The combination of IL-1beta and TGF-beta1 additively enhanced IL-11 secretion. Intestinal SEMFs secreted IL-11 in response to IL-1beta- and TGF-beta1. Mucosal IL-11 secretion might be important as an anti-inflammatory response in the pathogenesis of intestinal inflammation. 相似文献
32.
Masayuki Mori Shingo Akiyoshi Yosuke Mizuno Hisato Okuizumi Yasushi Okazaki Yoshihide Hayashizaki Masahiko Nishimura 《Mammalian genome》1998,9(9):695-709
We have applied the restriction landmark genomic scanning (RLGS) method to the SMXA recombinant inbred (RI) mouse strain
set to reveal its detailed genetic profile. A total of 663 polymorphic RLGS spot loci were identified, 576 of which were assigned
to chromosomes. Strain distribution patterns (SDPs) at 55 microsatellite marker loci were also obtained. As a result, the
total number of loci with distinct SDPs on chromosomes increased to 400. These loci were dispersed on all chromosomes, except
for the Chromosome (Chr) Y, and effectively covered the genome with an average spacing of 4 cM. The SMXA RI strain set, hereby,
would be of value for genetic study.
Received: 20 February 1998 / Accepted: 19 May 1998 相似文献
33.
Yuichi Sugahara Shingo Akiyoshi Yasushi Okazaki Yoshihide Hayashizaki Isao Tanihata 《Mammalian genome》1998,9(8):643-651
The RLGS (Restriction Landmark Genome Scanning) method was originally developed as a powerful method for enabling viewing
of thousands of restriction landmarks. It offers a tool for obtaining information about genetic loci, with a single RLGS profile
displaying approximately 2000 restriction landmarks as spots. One of the most useful applications is RLGS spot mapping, which
allows the efficient, low-cost construction of the genetic map of any organism. However, analyses of the profiles depend mainly
on human visual observation and are tedious and laborious. Although several commercially available image analyzing systems
for profile comparison have been examined, they cannot be used for the RLGS spot mapping system owing to the background characteristics
of the RLGS profiles, unsatisfactory rates of correspondence, and inefficient correction of informative genetic data. We therefore
developed a novel automatic image analysis system for RLGS spot mapping, using an original algorithm based on the binary image
transferred from the original RLGS profile. This system was employed for identifying non-polymorphic and parental strain-specific
polymorphic spots of the F1 mouse profile and yielded efficient initial screening of RLGS profiles.
Received: 5 December 1997 / Accepted: 6 April 1998 相似文献
34.
High-efficiency cloning of
Arabidopsis
full-length cDNA by biotinylated CAP trapper 总被引:17,自引:5,他引:12
Motoaki Seki Piero Carninci Yoko Nishiyama Yoshihide Hayashizaki Kazuo Shinozaki 《The Plant journal : for cell and molecular biology》1998,15(5):707-720
Full-length cDNAs are essential for functional analysis of plant genes. We constructed high-content, full-length cDNA libraries from Arabidopsis thaliana plants based on chemical introduction of a biotin group into the diol residue of the CAP structure of eukaryotic mRNA, followed by RNase I treatment, to select full-length cDNA. More than 90% of the total clones obtained were of full length; recombinant clones were obtained with high efficiency (2.2 × 106/9 μg starting mRNA). Sequence analysis of 111 randomly picked clones indicated that 32 isolated cDNA groups were derived from novel genes in the A. thaliana genome. 相似文献
35.
36.
Masahito Yoshihara Hiroko Ohmiya Susumu Hara Satoshi Kawasaki FANTOM consortium Yoshihide Hayashizaki Masayoshi Itoh Hideya Kawaji Motokazu Tsujikawa Kohji Nishida 《PloS one》2015,10(3)
The corneal endothelium is a monolayer of hexagonal corneal endothelial cells (CECs) on the inner surface of the cornea. CECs are critical in maintaining corneal transparency through their barrier and pump functions. CECs in vivo have a limited capacity in proliferation, and loss of a significant number of CECs results in corneal edema called bullous keratopathy which can lead to severe visual loss. Corneal transplantation is the most effective method to treat corneal endothelial dysfunction, where it suffers from donor shortage. Therefore, regeneration of CECs from other cell types attracts increasing interests, and specific markers of CECs are crucial to identify actual CECs. However, the currently used markers are far from satisfactory because of their non-specific expression in other cell types. Here, we explored molecular markers to discriminate CECs from other cell types in the human body by integrating the published RNA-seq data of CECs and the FANTOM5 atlas representing diverse range of cell types based on expression patterns. We identified five genes, CLRN1, MRGPRX3, HTR1D, GRIP1 and ZP4 as novel markers of CECs, and the specificities of these genes were successfully confirmed by independent experiments at both the RNA and protein levels. Notably none of them have been documented in the context of CEC function. These markers could be useful for the purification of actual CECs, and also available for the evaluation of the products derived from other cell types. Our results demonstrate an effective approach to identify molecular markers for CECs and open the door for the regeneration of CECs in vitro. 相似文献
37.
Yoshihide Mitani Asuman Mutlu James C Russell David N Brindley John DeAlmeida Marlene Rabinovitch 《Journal of applied physiology》2002,93(5):1770-1778
Dexfenfluramine (Dex), an appetite suppressant and serotonin reuptake inhibitor, is associated with pulmonary vascular disease (PVD) in some patients. The variability might be related to undetermined genetic abnormalities interacting with factors such as gender, weight loss, and vascular injury. We, therefore, assessed the effect of Dex (5 mg. kg(-1). day(-1)) in female obese rats, designated JCR:LA-cp or cp/cp; in lean rats, designated (+/?); and in normal Sprague-Dawley (S-D) rats under control conditions or after endothelial injury induced by monocrotaline (60 mg/kg). Pulmonary arterial pressure, right ventricular hypertrophy, percent medial wall thickness of muscular arteries, and muscularization of peripheral arteries were assessed as indexes of PVD. Although Dex reduced weight gain in cp/cp and S-D rats (P < 0.05 for both), it did not cause PVD. Moreover, PVD in S-D rats after monocrotaline injection was paradoxically ameliorated by Dex (P < 0.05) despite induction of pulmonary artery elastase (P < 0.05), which we showed is critical in inducing experimental PVD. Thus it is possible that Dex is concomitantly offsetting the sequelae of elastase activity. 相似文献
38.
Todaka N Moriya S Saita K Hondo T Kiuchi I Takasu H Ohkuma M Piero C Hayashizaki Y Kudo T 《FEMS microbiology ecology》2007,59(3):592-599
To clarify the lignocellulolytic process of the lower termite symbiotic protistan system, we constructed a cDNA library from an as yet uncultivated symbiotic protist community of the lower termite Reticulitermes speratus. The library was constructed by the biotinylated CAP trapper method and analyzed by one-pass sequencing. Phylogenetic analysis of actin orthologs confirmed that the resulting library reflected the intact organismal and mRNA composition of the symbiotic system. The contents of the library included abundant numbers of lignocellulolytic genes of the glycosyl hydrolase family orthologs (families 3, 5, 7, 8, 10, 11, 26, 43, 45 and 62). Our results clearly indicated that a multiple family of glycosyl hydrolase enzymes was involved in the protistan cellulose degradation system. The data also suggested that the most extensively expressed enzyme was glycosyl hydrolase family 7, a cellobiohydrolase ortholog. This family of enzymes enables the degradation of crystalline cellulose, the principal component of wood biomass. 相似文献
39.
Yamane K Asano Y Tamaki K Ihn H 《Biochemical and biophysical research communications》2007,352(1):69-77
TGF-beta receptors (TbetaRs) are serine/threonine kinase receptors that bind to TGF-beta and propagate intracellular signaling through Smad proteins. TbetaRs are repressed in some human cancers and expressed at high levels in several fibrotic diseases. We demonstrated that epidermal growth factor (EGF) up-regulates type II TGF-beta receptor (TbetaRII) expression in human dermal fibroblasts. EGF-mediated induction of TbetaRII expression was inhibited by the treatment of fibroblasts with a specific p38 mitogen-activated protein kinase (MAPK) inhibitor, SB203580, whereas MEK inhibitor PD98059 did not block the up-regulation of TbetaRII by EGF. EGF induced the TbetaRII promoter activity, and this induction was significantly blocked by SB203580, but not by PD98059. The overexpression of the dominant negative form of p38alpha or p38beta significantly reduced the induction of TbetaRII promoter activity by EGF. These results indicate that the EGF-mediated induction of TbetaRII expression involves the p38 MAPK signaling pathway. The EGF-mediated induction of TbetaRII expression may participate in a synergistic interplay between EGF and TGF-beta signaling pathway. 相似文献