Dysfunctional HDL: A novel important diagnostic and therapeutic target in cardiovascular disease?

High density lipoprotein (HDL) has many properties, which contribute to its atheroprotective role. However, some recent clinical trials have identified subjects with the progression of atherosclerosis despite normal levels of HDL cholesterol. This raises the question if all subfractions of HDL have the same properties. Moreover, recent investigations have shown that both acute and chronic inflammation may lead to structural and functional changes of HDL, which render the particles proinflammatory. Although therapeutic agents that increase HDL levels are now quite well established it is not clear whether they influence HDL quality. We review the current state of knowledge on the properties of HDL and factors/therapeutic agents which may restrain the transformation of normal HDL into dysfunctional HDL.     

Descriptions of digeneans from <Emphasis Type="Italic">Sardina pilchardus</Emphasis> (Walbaum) (Clupeidae) off the Algerian coast of the western Mediterranean,with a complete list of its helminth parasites

Five species of digeneans parasitic in the pilchard Sardina pilchardus (Walbaum), a little studied host, from off the Algerian coast of the western Mediterranean are redescribed. These are Parahemiurus merus (Linton, 1910) Manter, 1940, Aphanurus stossichii (Monticelli, 1891) Looss, 1907, Aphanurus virgula Looss, 1907, Lecithaster confusus Odhner, 1905 and Pronoprymna ventricosa (Rudolphi, 1819) Poche, 1926. One of these, A. virgula, is a new record for this host. One other digenean, Hemiurus luehei Odhner, 1905, was also recorded from this host. A complete checklist of the helminth parasites of S. pilchardus throughout its distributional range, comprising 104 host-parasite records of 39 taxa, is presented.     

Discrepancy between clinical and histological effects of DHA supplementation in a rat model of pouchitis

Docosahexaenoic acid (DHA) potentially modulates inflammatory processes. Therefore, the aim of this study was to determine the influence of DHA supplementation on the expression of intestinal inflammation and nutritional status in rats which have undergone restorative proctocolectomy. Twenty-four Wistar rats were operated. After the induction of pouchitis, animals were randomly divided into a control group (CG) and supplementation groups receiving respectively a semi-synthetic diet without or with DHA (in a lower or higher dose, respectively known as the lower dose, LD, and higher dose, HD, groups) for six weeks. Selected nutritional parameters were assessed. Histopathological and immunohistochemical analysis of pouch mucosa specimens was also performed. The effectiveness of feeding and quality of stools were significantly better in the HD group than in the CG. The intensity of inflammation (Moskovitz scale) was higher in HD and LD than in CG (p = 0.03 and p = 0.0006, respectively). Nevertheless, pouch adaptation (Laumonier scale) was more significant in LD than in CG (p = 0.007). On the other hand, tissue expression of IL-1α and IL-10 was higher in HD and LD than in CG (IL-1α, p = 0.009 and p = 0.05, respectively; IL-10, p = 0.04 for both). DHA supplementation has no impact on body weight gain. Yet it seems that it may improve the effectiveness of nutrition and stool quality in rats which have undergone restorative proctocolectomy. Simultaneously, it increases the intensity of pouch adaptation and inflammation. The specificity of observed changes is not clear. However, it may imply potential modulation of inflammatory processes of pouch mucosa.     

Floral structure and pollen morphology of two zinc violets (Viola lutea ssp. calaminaria and V. lutea ssp. westfalica) indicate their taxonomic affinity to Viola lutea

Two zinc violets, the yellow form of the Aachen–Liège area and the blue morph of Blankenrode in western Westphalia, have very restricted occurrence on heavy metal waste heaps. Their taxonomic affinities have not been finally resolved. The flower micromorphological analysis presented here indicates that both zinc violets are closely related to the alpine Viola lutea, in line with our earlier published molecular data, but not with the conclusions of other authors. The zinc violets are classed at the rank of subspecies as V. lutea: ssp. calaminaria for the yellow zinc violet and ssp. westfalica for its blue counterpart. Although the violets examined (V. lutea, V. lutea ssp. calaminaria, V. lutea ssp. westfalica) are closely related, there is no evidence that V. lutea ssp. westfalica is a descendent of V. tricolor. Here we provide the most detailed information on generative organ structure in the four violets studied.     

Pooled sample-based GWAS: a cost-effective alternative for identifying colorectal and prostate cancer risk variants in the Polish population

Background

Prostate cancer (PCa) and colorectal cancer (CRC) are the most commonly diagnosed cancers and cancer-related causes of death in Poland. To date, numerous single nucleotide polymorphisms (SNPs) associated with susceptibility to both cancer types have been identified, but their effect on disease risk may differ among populations.

Methods

To identify new SNPs associated with PCa and CRC in the Polish population, a genome-wide association study (GWAS) was performed using DNA sample pools on Affymetrix Genome-Wide Human SNP 6.0 arrays. A total of 135 PCa patients and 270 healthy men (PCa sub-study) and 525 patients with adenoma (AD), 630 patients with CRC and 690 controls (AD/CRC sub-study) were included in the analysis. Allele frequency distributions were compared with t-tests and χ²-tests. Only those significantly associated SNPs with a proxy SNP (p<0.001; distance of 100 kb; r²>0.7) were selected. GWAS marker selection was conducted using PLINK. The study was replicated using extended cohorts of patients and controls. The association with previously reported PCa and CRC susceptibility variants was also examined. Individual patients were genotyped using TaqMan SNP Genotyping Assays.

Results

The GWAS selected six and 24 new candidate SNPs associated with PCa and CRC susceptibility, respectively. In the replication study, 17 of these associations were confirmed as significant in additive model of inheritance. Seven of them remained significant after correction for multiple hypothesis testing. Additionally, 17 previously reported risk variants have been identified, five of which remained significant after correction.

Conclusion

Pooled-DNA GWAS enabled the identification of new susceptibility loci for CRC in the Polish population. Previously reported CRC and PCa predisposition variants were also identified, validating the global nature of their associations. Further independent replication studies are required to confirm significance of the newly uncovered candidate susceptibility loci.     

Estimating the carbonyl anharmonic vibrational frequency from affordable harmonic frequency calculations

A linear correlation between harmonic and anharmonic frequencies of water calculated at B3LYP level of theory was observed with a number of basis sets. Similar relationships were found in both the gas phase and solution for several small molecules. The best correlation was found for C = O stretch mode in formaldehyde, formamide and N-methylacetamide. The average difference between B3LYP harmonic and anharmonic ν(C = O) frequencies calculated with several basis sets in these molecules was 30 cm(-1). The ad hoc correction of -30 cm(-1), added to harmonic frequencies of two different carbonyl groups present in a structure of a larger molecule was tested as a fast way of predicting anharmonic frequencies without elaborated calculations. The proposed approach was tested successfully on a larger molecule of E and Z isomers of N-acetyl-α,β-dehydrophenylalanine N',N'-dimethylamide [Ac-(E/Z)-ΔPhe-NMe(2)] and the estimated anharmonic ν(C = O) frequencies were close to directly calculated results.     

A revision of Patagifer Dietz, 1909 (Digenea: Echinostomatidae) and a key to its species

Patagifer Dietz, 1909 is revised and a key to the species is presented. P. oweni n. sp. is described from Threskiornis molucca (Cuvier) in the Western Province of Papua New Guinea and distinguished from the related P. chandrapuri Srivastava, 1952 by: the shape of the pair of large angle spines (cudgel-shaped vs sub-rectangular); pointed (vs rod-shaped) marginal spines; a smaller body and internal organs; more anteriorly located testes; and larger eggs. The new species differs from P. brygooi Richard, 1964 in its larger body, head collar, suckers, pharynx and eggs, longer oesophagus and testes, the latter being also more elongate and more anteriorly located, and a different number of collar spines (61-62 vs 59). P. bilobus (Rudolphi, 1819) (the type-species), P. parvispinosus Yamaguti, 1933, P. chandrapuri and P. vioscai Lumsden, 1962 are redescribed on the basis of museum and newly collected material. The variations in the number and size of the collar spines and other metrical characters of P. bilobus are studied in two different host species from Europe, Plegadis falcinellus and Platalea leucorodia. Other species considered valid are: Patagifer consimilis Dietz, 1909, P. acuminatus Johnston, 1917, P. fraternus Johnston, 1917, P. wesleyi Verma, 1936, P. brygooi and P. toki Onda, Imai & Ishii, 1983. P. plegadisi Sakla, Monib & Mandour, 1988 and P. simarai Nigam, 1944 are considered synonyms of P. bilobus, and P. sarai Saksena, 1957 is placed in synonymy with P. chandrapuri. Forms considered dubious are: P. bilobus of Machida et al. (Jpn J Parasitol 15:339, 1966) and Machida (Bull Natl Sci Mus Tokyo 11:157-160, 1968), P. simerai [sic] of Mehra (The fauna of India and adjacent countries. Platyhelminthes, 1980), P. skrjabini Hilmy, 1949 sp. inq. and P. srivastavai Peter, 1954 sp. inq. Lists of the records and hosts of the 11 valid species are included.