Cluster root development in Grevillea robusta (Proteaceae). I. Xylem, pericycle, cortex, and epidermis development in a determinate root

The cluster roots of Grevillea robusta A. Cunn. ex R. Br. are composed of determinate rootlets that stop growing, but remain physiologically active for several months. Their apical organization, both before and after maturation, was studied by light and transmission electron microscopy. Each cell layer forms a dome, with an initial cell at its end. Xylem elements form a complicated triarch array at the base of the rootlet, passing along the rootlet as two files, and then joining at the tip to form a single file, surrounded by six pericycle cells. At the base of the rootlet, shorter xylem cells and thick-walled support cells are visible. A root cap, present in rootlets grown in vermiculite, was eventually displaced by root hair growth. Rootlets grown in Hoagland's solution lacked root caps and were significantly shorter than those grown in vermiculite. Cell fate was analysed in terms of cell position and is discussed in terms of pattern and development.     

Bacterial dynamics in two high-arctic lakes

The heterotrophic planktonic bacteria in two high-arctic lakes were studied by direct microscope count and the enzymatic uptake of ¹⁴C labelled glucose which generally conformed to Michaelis-Menten kinetics. Bacterial numbers and activity in oligo-trophic Char Lake ranged from 0.1 to 2.0×10^?3 bacteria/l and a maximum uptake velocity (V_max) of 1.8 × 10^?3μg glucose l^? h^?1. Nearby Meretta Lake received waste water from the Department of Transport Base at Resolute and this eutrophication was reflected in higher bacterial numbers of 2-80 × 10⁸/1 and Kmax of 0.1 × 10^?1-7.5 × 10^?1 fig glucose l^?1 h^?1 The Kmax per cell in Char Lake was 3 × 10^?11μg glucose l^?1 h^?1 and changed little between the period of solid ice cover in May and ice-free conditions in August. Bacterial cycles could not be related to phytoplankton cycles in either lake. Comparison of kinetic data from several lakes suggests a relationship between the bacterial uptake rate of glucose and phytoplankton production. Both bacterial numbers and activity in Char Lake may be very close to the minima to be expected in undisturbed freshwater environments.     

Developing methods for quantifying the apparent abundance of fiddler crabs (Ocypodidae: Uca) in mangrove habitats

Counting the number of individuals emerging from burrows is the most practical method for estimating the apparent abundance of Australian Uca species living in mangrove habitats. Experiments were conducted to investigate the effect on counts of quadrat design, distance of observer, quadrat size, recovery time and observational technique. Significant differences in the apparent abundance of one species were found when the subjects were within 2 m of the observer, and when a conspicuous quadrat was used. The largest quadrat tested provided the least variability in counts but an intermediate size (0.56 m²) was more practical. Most Uca active within a 30-min period emerged during the first 10 min regardless of site, species, sex or season. There was a linear correlation between scanning and continuous observation indicating that the former method could be useful when sampling time was limited. Temporal changes in the apparent abundance of Uca suggest that long-term sampling and more detailed studies will be worthwhile.     

Can increased niche opportunities and release from enemies explain the success of introduced Yellowhammer populations in New Zealand?

Some introduced species succeed spectacularly, becoming far more abundant in their introduced than in their native range. 'Increased niche opportunities' and 'release from enemy regulation' are two hypotheses that have been advanced to explain the enhanced performance of introduced species in their new environments. Using an introduced bird species, the Yellowhammer Emberiza citrinella , which was first released in New Zealand in 1862, as a model, we tested some predictions based on these hypotheses. By quantifying habitat availability and quality, and measuring nest predation rates, we investigated whether increased niche opportunities or release from nest predation could explain the higher density of the Yellowhammer in New Zealand farmland, compared to farmland in their native Britain. Yellowhammer territory densities were over three times higher in New Zealand (0.40 territories per ha) than in comparable British farmland (0.12 territories per ha), and Yellowhammer densities remained significantly higher in New Zealand, after accounting for differences in habitat availability. The density and diversity of invertebrates, a key food resource for nestling Yellowhammers, was significantly lower in New Zealand than in Britain. Hence, these aspects of niche availability and quality cannot explain the higher density of Yellowhammers in New Zealand. Nest predation rates in New Zealand were similar to those in Britain, suggesting that release from nest predation also could not account for the higher density of Yellowhammers in New Zealand. Differences in winter survival, due to differences in winter food supply or the severity of the winter climate, along with release from other types of 'enemy' regulation are possible alternative explanations.     

Methyl bromide emissions to the atmosphere from temperate woodland ecosystems

The environmental importance of methyl bromide (CH₃Br) arises from its contribution to stratospheric ozone loss processes and, as a consequence, its emissions from anthropogenic sources are subject to the Montreal Protocol. A better understanding of the natural budget of CH₃Br is required for assessing the benefit of anthropogenic emission reductions and for understanding any potential effects of environmental change on global CH₃Br concentrations. Measurements of CH₃Br flux in temperate woodland ecosystems, in particular, are very sparse, yet these cover a large fraction of terrestrial land surface. Results presented here from 18 months of field measurements of CH₃Br fluxes in four static flux chambers in a woodland in Scotland and from enclosures of rotting wood and deciduous and coniferous leaf litter suggest net emissions from temperate woodlands. Net CH₃Br fluxes in the woodland varied between the chambers, fluctuating between net uptake and net emissions (?73 to 279 ng m^?2 h^?1 across 161 individual measurements), and with no strong seasonality, but with time‐averaged net emission overall [27±57 (1 SD)] ng m^?2 h^?1]. This work demonstrates that scale‐up needs to be based on sufficient individual measurements to provide a reasonably constrained estimate of the long‐term mean. Mean (±1 SD) net CH₃Br emissions from deciduous and coniferous leaf litter were 43 (±33) ng kg^?1 (dry weight) h^?1 and 80 (±37) ng kg^?1 (dry weight) h^?1, respectively, and ～1–2 ng kg^?1 (fresh weight) h^?1 from rotting woody litter. Despite the intrinsic variability, data obtained here consistently point to the conclusion that the temperate forest soil/litter ecosystem is a net source of CH₃Br to the atmosphere.     

The abundance,distribution and structural characteristics of tree‐holes in Nothofagus forest,New Zealand

Tree‐holes provide an important microhabitat that is used for feeding, roosting and breeding by numerous species around the world. Yet despite their ecological importance for many of New Zealand's endangered species, few studies have investigated the abundance or distribution of tree‐holes in native forests. We used complementary ground and climbed tree surveys to determine the abundance, distribution and characteristics of tree‐holes in undisturbed Nothofagus forest in the Lewis Pass, New Zealand. We found that hole‐bearing trees were surprisingly abundant compared with many other studies, including Australian Eucalyptus species and American beech. In fact, we estimated as many as 3906 tree‐holes per hectare, of which 963 holes per hectare were potentially large enough to provide roost sites for hole‐nesting bats in New Zealand, while only eight holes per hectare were potentially suitable for specialist hole‐nesting birds. This was of great interest as primary cavity‐excavating animals are absent from New Zealand forests, compared with North America and Australia. Moreover, tree‐hole formation in New Zealand is likely to be dominated by abiotic processes, such as branch breakage from windstorms and snow damage. As has been found in many other studies, tree‐holes were not uniformly distributed throughout the forest. Tree‐holes were significantly more abundant on the least abundant tree species, Nothofagus fusca, than on either N. menziesii or N. solandri. In addition to tree species, tree size was also an important factor influencing the structural characteristics of tree‐holes and their abundance in this forest. Moreover, these trends were not fully evident without climbed tree surveys. Our results revealed that ground‐based surveys consistently underestimated the number of tree‐holes present on Nothofagus trees, and illustrate the importance of using climbed inspections where possible in tree‐hole surveys. We compare our results with other studies overseas and discuss how these are linked to the biotic and abiotic processes involved in tree‐hole formation. We consider the potential implications of our findings for New Zealand's hole‐dwelling fauna and how stand dynamics and past and future forest management practices will influence the structural characteristics of tree‐holes and their abundance in remnant forest throughout New Zealand.     

Systematic assessment of terrestrial biogeochemistry in coupled climate–carbon models

With representation of the global carbon cycle becoming increasingly complex in climate models, it is important to develop ways to quantitatively evaluate model performance against in situ and remote sensing observations. Here we present a systematic framework, the Carbon‐LAnd Model Intercomparison Project (C‐LAMP), for assessing terrestrial biogeochemistry models coupled to climate models using observations that span a wide range of temporal and spatial scales. As an example of the value of such comparisons, we used this framework to evaluate two biogeochemistry models that are integrated within the Community Climate System Model (CCSM) – Carnegie‐Ames‐Stanford Approach′ (CASA′) and carbon–nitrogen (CN). Both models underestimated the magnitude of net carbon uptake during the growing season in temperate and boreal forest ecosystems, based on comparison with atmospheric CO₂ measurements and eddy covariance measurements of net ecosystem exchange. Comparison with MODerate Resolution Imaging Spectroradiometer (MODIS) measurements show that this low bias in model fluxes was caused, at least in part, by 1–3 month delays in the timing of maximum leaf area. In the tropics, the models overestimated carbon storage in woody biomass based on comparison with datasets from the Amazon. Reducing this model bias will probably weaken the sensitivity of terrestrial carbon fluxes to both atmospheric CO₂ and climate. Global carbon sinks during the 1990s differed by a factor of two (2.4 Pg C yr^?1 for CASA′ vs. 1.2 Pg C yr^?1 for CN), with fluxes from both models compatible with the atmospheric budget given uncertainties in other terms. The models captured some of the timing of interannual global terrestrial carbon exchange during 1988–2004 based on comparison with atmospheric inversion results from TRANSCOM (r=0.66 for CASA′ and r=0.73 for CN). Adding (CASA′) or improving (CN) the representation of deforestation fires may further increase agreement with the atmospheric record. Information from C‐LAMP has enhanced model performance within CCSM and serves as a benchmark for future development. We propose that an open source, community‐wide platform for model‐data intercomparison is needed to speed model development and to strengthen ties between modeling and measurement communities. Important next steps include the design and analysis of land use change simulations (in both uncoupled and coupled modes), and the entrainment of additional ecological and earth system observations. Model results from C‐LAMP are publicly available on the Earth System Grid.     

Some new Darwin vascular plant specimens from the Beagle voyage

This paper reports 24 newly discovered specimens of 21 species made by Charles Darwin in Argentina, Australia, Brazil, Chile, Ecuador and Uruguay while on the 1831–1836 voyage of HMS Beagle. They have been found in Cambridge University Herbarium and the herbaria of the Missouri Botanical Garden, Natural History Museum, London, New York Botanical Garden and the Royal Botanic Gardens, Kew, since the earlier publications of Porter. Included are type specimens of Calceolaria darwinii (isotype; = C. uniflora), Cuscuta gymnocarpa (holotype and isotypes), C. sandwichiana var. mimosae (isolectotypes = C. gymnocarpa), Ephedra frustillata (lectotype and isolectotypes), Ourisia breviflora (isolectotype), Polypodium paleaceum (syntype?; = Ctenitis sloanei) and Urera gaudichaudiana (holotype; = Laportea aestuans). © 2009 The Linnean Society of London, Botanical Journal of the Linnean Society, 2009, 159 , 12–18.     

Variation in local abundance and species richness of stream fishes in relation to dispersal barriers: implications for management and conservation

1. Barriers to immigration, all else being equal, should in principle depress local abundance and reduce local species richness. These issues are particularly relevant to stream‐dwelling species when improperly designed road crossings act as barriers to migration with potential impacts on the viability of upstream populations. However, because abundance and richness are highly spatially and temporally heterogeneous and the relative importance of immigration on demography is uncertain, population‐ and community‐level effects can be difficult to detect. 2. In this study, we tested the effects of potential barriers to upstream movements on the local abundance and species richness of a diverse assemblage of resident stream fishes in the Monongahela National Forest, West Virginia, U.S.A. Fishes were sampled using simple standard techniques above‐ and below road crossings that were either likely or unlikely to be barriers to upstream fish movements (based on physical dimensions of the crossing). We predicted that abundance of resident fishes would be lower in the upstream sections of streams with predicted impassable barriers, that the strength of the effect would vary among species and that variable effects on abundance would translate into lower species richness. 3. Supporting these predictions, the statistical model that best accounted for variation in abundance and species richness included a significant interaction between location (upstream or downstream of crossing) and type (passable or impassable crossing). Stream sections located above predicated impassable culverts had fewer than half the number of species and less than half the total fish abundance, while stream sections above and below passable culverts had essentially equivalent richness and abundance. 4. Our results are consistent with the importance of immigration and population connectivity to local abundance and species richness of stream fishes. In turn, these results suggest that when measured at appropriate scales (multiple streams within catchments), with simple protocols amenable to use by management agencies, differences in local abundance and species richness may serve as indicators of the extent to which road crossings are barriers to fish movement and help determine whether road‐crossing improvements have restored connectivity to stream fish populations and communities.     

Is the signal from the mesophyll to the guard cells a vapour‐phase ion?

Previous studies have suggested that the red light and CO₂ responses of stomata are caused by a signal from the mesophyll to the guard cells. Experiments were conducted to test the idea that this signal is a vapour‐phase ion. Stomata in isolated epidermes of Tradescantia pallida were found to respond to air ions created by an electrode that was positioned under the epidermes. Anthocyanins in the epidermes of this species were observed to change colour in response to these air ions, and this change in colour was attributed to changes in pH. A similar change in lower epidermal colour was observed in intact leaves upon illumination and with changes in CO₂ concentration. Based on the change in epidermal colour, the pH of the epidermis was estimated to be approximately 7.0 in darkness and 6.5 in the light. Stomata in isolated epidermes responded to pH when suspended over (but not in contact with) solutions of different pH. We speculate that stomatal responses to CO₂ and light are caused by vapour‐phase ions, possibly hydronium ions that change the pH of the epidermis.