The earliest stages of adaptation in an experimental plant population: strong selection on QTLS for seed dormancy

Colonizing species may often encounter strong selection during the initial stages of adaptation to novel environments. Such selection is particularly likely to act on traits expressed early in development since early survival is necessary for the expression of adaptive phenotypes later in life. Genetic studies of fitness under field conditions, however, seldom include the earliest developmental stages. Using a new set of recombinant inbred lines, we present a study of the genetic basis of fitness variation in Arabidopsis thaliana in which genotypes, environments, and geographic location were manipulated to study total lifetime fitness, beginning with the seed stage. Large‐effect quantitative trait loci (QTLs) for fitness changed allele frequency and closely approached 90% in some treatments within a single generation. These QTLs colocated with QTLs for germination phenology when seeds were dispersed following a schedule of a typical winter annual, and they were detected in two geographic locations at different latitudes. Epistatically interacting loci affected both fitness and germination in many cases. QTLs for field germination phenology colocated with known QTLs for primary dormancy induction as assessed in laboratory tests, including the candidate genes DOG1 and DOG6. Therefore fitness, germination phenology, and primary dormancy are genetically associated at the level of specific chromosomal regions and candidate loci. Genes associated with the ability to arrest development at early life stages and assess environmental conditions are thereby likely targets of intense natural selection early in the colonization process.     

Dense Crithidia Growth and Heme Sparing: Relation to Fe,Cu, Mo Chelation*

SYNOPSIS. Heme, intrinsically required by Trypanosomatidae, is unstable, especially in conventional alkaline (pH 7.2–8.0) media. Low solubility of heme in a pH 6.5 basal medium (developed to assay biopterin with Crithidia fasciculata) posed a problem: in media acidified during growth because of glycolysis, heme precipitated, perhaps contributed to acid-limited growth and interfered with densitometric estimation of growth. The remedy was to: replace glucose with less rapidly metabolized mannitol; distribute media in thin layers to promote oxidation of acetate, fumarate, and malate (presumably leaving an alkaline residue); and buffer heavily with histidine + Good zwitterionic buffers, and superimpcse physiological buffering by arginine + asparagine whose catabolism appeared to yield an excess of NH⁺₄ over acid. Thereupon, Fe and Cu deficiencies sharply limited growth in the medium whose main chelators were: (a) 2,3–dihydroxybenzoic + 5-sulfosalicylic acids (which preferentially bind transitional elements at their higher valences; (b) malic and gluconic acids; and (c) histidine. With unconventionally heightened concentrations of Fe, Cu, and Mo (the latter serving as Cu buffer as well as nutrient per se), the hemin concentration could be lowered, widening the margin of safety for heme solubility. Growth then reached 1.4 × 10⁸ cell/ml. This medium may serve to screen for ligands promoting uptake or release of Fe and Cu. The increased growth is a step towards improving the assay medium for biopterin and practical use of Crithidia to assay several B vitamins and essential amino acids for metazoa.     

Isolation of polymorphic tetranucleotide microsatellite markers for the black‐bellied seedcracker (Pyrenestes ostrinus)

We have isolated 10 polymorphic microsatellite markers for the black‐bellied seedcracker (Pyrenestes ostrinus) from genomic libraries enriched either for (AAGG)_n or (ATCT)_n repetitive elements and characterized them in 39 individuals. The number of alleles ranged from two to 27 per locus with the observed heterozygosity ranging from 0.38 to 0.94. These markers will be useful for analysis of questions concerning parentage and population genetic structure.     

Biochemical and Cytological Evidence for an Overabundance of Mucocysts in the bcd Pattern Mutant of Tetrahymena thermophila

ABSTRACT. Three acidic proteins (42 kD, 43 kD and 50 kD) were present in unusually high concentrations in cortical preparations of the Tetrahymena pattern mutant broadened cortical domains (bcd). Antisera to the 42-kD and 50-kD proteins bound to discharging mucocysts and food vacuole contents in both wild-type and mutant cells. Subsequent analysis revealed that bcd mutant cell pellicles possess five times more "docked" mucocysts than their wild-type counterparts.     

A revision of the genus Naroma (Lepidoptera: Lymantriidae)

A key is given to the four species of Naroma now recognised. The species are redescribed and their distribution is listed. The early stages of N.varipes and N.signifera are described by D.G.Sevastopulo.     

Biological responses to permafrost thaw slumping in Canadian Arctic lakes

1. Rapid environmental change occurring in high‐latitude regions has the potential to cause extensive thawing of permafrost. Retrogressive thaw slumps are a particularly spectacular form of permafrost degradation that can significantly impact lake–water chemistry; however, to date, the effects on aquatic biota have received little attention. 2. We used a diatom‐based palaeolimnological approach featuring a paired lake study design to examine the impact of thaw slumping on freshwater ecosystems in the low Arctic of western Canada. We compared biological responses in six lakes affected by permafrost degradation with six undisturbed, reference lakes. 3. Slump‐affected lakes exhibited greater biological change than the paired reference systems, although all systems have undergone ecologically significant changes over the last 200 years. Four of the six reference systems showed an increase in the relative abundance of planktonic algal taxa (diatoms and scaled chrysophytes), the earliest beginning about 1900, consistent with increased temperature trends in this region. 4. The response of sedimentary diatoms to thaw slumping was understandably variable, but primarily related to the intensity of disturbance and associated changes in aquatic habitat. Five of the slump‐affected lakes recorded increases in the abundance and diversity of periphytic diatoms at the presumed time of slump initiation, consistent with increased water clarity and subsequent development of aquatic macrophyte communities. Slump‐affected lakes generally displayed lower nutrient levels; however, in one system, thaw slumping, induced by an intense fire at the site in 1968, ostensibly led to pronounced nutrient enrichment that persists today. 5. Our results demonstrate that retrogressive thaw slumping represents an important stressor to the biological communities of lakes in the western Canadian Arctic and can result in a number of limnological changes. We also show that palaeolimnological methods are effective for inferring the timing and response of aquatic ecosystems to permafrost degradation. These findings provide the first long‐term perspective on the biological response to permafrost thaw, a stressor that will become increasingly important as northern landscapes respond to climate change.     

Hemispheric‐scale patterns of climate‐related shifts in planktonic diatoms from North American and European lakes

A synthesis of over 200 diatom‐based paleolimnological records from nonacidified/nonenriched lakes reveals remarkably similar taxon‐specific shifts across the Northern Hemisphere since the 19th century. Our data indicate that these diatom shifts occurred in conjunction with changes in freshwater habitat structure and quality, which, in turn, we link to hemispheric warming trends. Significant increases in the relative abundances of planktonic Cyclotella taxa (P<0.01) were concurrent with sharp declines in both heavily silicified Aulacoseira taxa (P<0.01) and benthic Fragilaria taxa (P<0.01). We demonstrate that this trend is not limited to Arctic and alpine environments, but that lakes at temperate latitudes are now showing similar ecological changes. As expected, the onset of biological responses to warming occurred significantly earlier (P<0.05) in climatically sensitive Arctic regions (median age=ad 1870) compared with temperate regions (median age=ad 1970). In a detailed paleolimnological case study, we report strong relationships (P<0.005) between sedimentary diatom data from Whitefish Bay, Lake of the Woods (Ontario, Canada), and long‐term changes in air temperature and ice‐out records. Other potential environmental factors, such as atmospheric nitrogen deposition, could not explain our observations. These data provide clear evidence that unparalleled warming over the last few decades resulted in substantial increases in the length of the ice‐free period that, similar to 19th century changes in high‐latitude lakes, likely triggered a reorganization of diatom community composition. We show that many nonacidified, nutrient‐poor, freshwater ecosystems throughout the Northern Hemisphere have crossed important climatically induced ecological thresholds. These findings are worrisome, as the ecological changes that we report at both mid‐ and high‐latitude sites have occurred with increases in mean annual air temperature that are less than half of what is projected for these regions over the next half century.