An Exploratory Framework for the Empirical Measurement of Resilience

Deliberate progress towards the goal of long-term sustainability depends on understanding the dynamics of linked social and ecological systems. The concept of social-ecological resilience holds promise for interdisciplinary syntheses. Resilience is a multifaceted concept that as yet has not been directly operationalized, particularly in systems for which our ignorance is such that detailed, parameter-rich simulation models are difficult to develop. We present an exploratory framework as a step towards the operationalization of resilience for empirical studies. We equate resilience with the ability of a system to maintain its identity, where system identity is defined as a property of key components and relationships (networks) and their continuity through space and time. Innovation and memory are also fundamental to understanding identity and resilience. By parsing our systems into the elements that we subjectively consider essential to identity, we obtain a small set of specific focal variables that reflect changes in identity. By assessing the potential for changes in identity under specified drivers and perturbations, in combination with a scenario-based approach to considering alternative futures, we obtain a surrogate measure of the current resilience of our study system as the likelihood of a change in system identity under clearly specified conditions, assumptions, drivers and perturbations. Although the details of individual case studies differ, the concept of identity provides a level of generality that can be used to compare measure of resilience across cases. Our approach will also yield insights into the mechanisms of change and the potential consequences of different policy and management decisions, providing a level of decision support for each case study area.     

Meeting the challenges of drug discovery: a multidisciplinary re-evaluation of current practices

A report on the Keystone Symposium 'Meeting the Challenges of Drug Discovery', Vancouver, Canada, 15-19 January 2005.     

Crystallization for the Downstream Processing of Proteins

Protein crystallization offers great potential in downstream processing of pharmaceutical protein active ingredients. The advantages, which are well known and widely utilized in low‐molecular weight crystallization, can also be expected to be found to some extent in protein crystallization. However, there is still a marked need for improvement in two main areas of protein processing, namely, in crystallization from impure solutions and scale‐up.     

<Emphasis Type="Italic">Leptocorticium</Emphasis> (Corticiaceae s.l., Basidiomycota): New species and combinations

The genus Leptocorticium is redescribed, and a key to the species is provided. A new taxon, Leptocorticium tenellum, is described, and two new combinations, L. sasae and L. utribasidiatum, are proposed. Dentocorticium nephrolepidis is determined to be conspecific with L. cyatheae. All four species are described and illustrated.     

Riparian roots through time, space and disturbance

Riparian zones are landscape features adjacent to streams and are widely recognized as important in reducing erosion and filtering groundwater. Few studies directly investigate rooting dynamics of riparian areas, and little information exists concerning riparian root densities, biomass, depth profiles, changes through time, or vulnerability to disturbance. This study examined spatial and temporal patterns in root systems in streamsides influenced by season, hydrologic regime, vegetative composition, and ice storm disturbance in the eastern Adirondacks, New York. Sequential root cores and in-growth cores were collected from June 2000 through August 2001 in a riparian area with minimal ice storm damage adjacent to a third-order stream. Data were used to assess seasonal trends in root biomass and to provide a reference for spatial comparisons. The biomass and surface area of roots collected in the reference site cores were compared with cores collected at nine additional riparian sites differing in degree of canopy damage from the January 1998 ice storm. Average root biomass at the reference site was 1330 g/m², comparable to or greater than values reported for terrestrial and other riparian systems. Root biomass varied seasonally with a maximum root biomass in August, 2000; this result was not repeated the following year after the water table inundated much of the rooting zone in mid-June. Root biomass was spatially variable on a range of scales. Although the maximum root surface area occurred in the upper 10 cm, root biomass peaked at 20–30 cm belowground, unlike observations from most other root studies where the maximum root biomass has been found in the top 10 cm. Areas severely damaged by the ice storm had significantly less root biomass and surface area than areas with low damage. This study demonstrates that root biomass in riparian areas is highly dynamic over time, space, and across disturbance sites. Our findings suggest that the spatial variability in root densities has direct implications for riparian vulnerability to erosion.     

Plectroninia celtica n. sp. (Calcarea, Minchinellidae), a new species of “pharetronid” sponge from bathyal depths in the northern Porcupine Seabight, NE Atlantic

Recent pharetronid sponges were regarded as relict species in tropical and subtropical waters, inhabiting cryptic habitats on coral reefs and in caves. More recent findings of a new species of the genus Plectroninia off northern Norway, with an inner fused skeleton have changed that view. Recent investigations on the sponge fauna of the “Propeller Mound”, northern Porcupine Seabight, focusing on sponges growing on the azooxanthellate cold-water coral Lophelia pertusa (Linné 1758) and Madrepora oculata Linné 1758, established the presence of a species of Plectroninia new to science. Its status as a common species within this deep-water coral habitat and the general status of the genus Plectroninia are discussed.     

Phylogenetic relationships in the subgenus Mus (genus Mus, family Muridae, subfamily Murinae): examining gene trees and species trees

Over eight kilobases (kb) of sequence from eight genes including two mitochondrial loci, Cyt b and 12S, and six nuclear loci, B2m , Zp3 , Tcp1, Sry, Smcx and Smcy , were used to investigate phylogenetic relationships among 11 taxa representing eight species within the rodent genus Mus . Particular attention was given to discerning relationships among species within the subgenus Mus including members of a Palearctic clade ( M. musculus , M. spicilegus , M. macedonicus and M. spretus ) and members of an Asian clade ( M. caroli , M. cookii and M. cervicolor ), as previous studies using different datasets have produced different topologies for taxa within these two groups. While parsimony analyses of the combined eight-gene dataset yielded a single, fully resolved tree, support values were lower for nodes resolving relationships within the Palearctic and Asian clades than they were elsewhere in the tree. In addition, a maximum likelihood analysis of the same eight-gene dataset yielded different topologies for both the Palearctic and the Asian clades. Both observations are indicative of clade instability. The nature of this instability was explored through a comparison with our previous study in which we included the two mitochondrial loci and only four of the six nuclear genes, and through an analysis of partitioned data, specifically mitochondrial vs. nuclear genes. This study underscores the importance of considering among-site rate variation in phylogeny reconstruction. © 2005 The Linnean Society of London, Biological Journal of the Linnean Society , 2005, 84 , 653–662.